Experiment: 6-Pentyl-2H-pyran-2-one 0.4177863333 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20183 and SM_b20184 overlap by 4 nucleotides SM_b20184 and SM_b20185 overlap by 4 nucleotides SM_b20185 and SM_b20186 are separated by 120 nucleotides
SM_b20183: SM_b20183 - ABC transporter ATP-binding protein, at 199,998 to 200,621
_b20183
SM_b20184: SM_b20184 - ABC transporter ATP-binding protein, at 200,618 to 201,346
_b20184
SM_b20185: SM_b20185 - hypothetical protein, at 201,343 to 202,134
_b20185
SM_b20186: SM_b20186 - glutathione-dependent formaldehyde-activating protein, at 202,255 to 202,824
_b20186
Position (kb) 201
202
203 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 200.421 kb on + strand, within SM_b20183 at 200.582 kb on + strand at 200.584 kb on + strand at 200.585 kb on - strand at 200.585 kb on - strand at 200.585 kb on - strand at 201.081 kb on + strand, within SM_b20184 at 201.226 kb on - strand, within SM_b20184 at 201.517 kb on + strand, within SM_b20185 at 201.517 kb on + strand, within SM_b20185 at 201.517 kb on + strand, within SM_b20185 at 201.517 kb on + strand, within SM_b20185 at 201.517 kb on + strand, within SM_b20185 at 201.518 kb on - strand, within SM_b20185 at 201.518 kb on - strand, within SM_b20185 at 201.519 kb on + strand, within SM_b20185 at 201.519 kb on + strand, within SM_b20185 at 201.520 kb on - strand, within SM_b20185 at 201.520 kb on - strand, within SM_b20185 at 201.522 kb on + strand, within SM_b20185 at 201.522 kb on + strand, within SM_b20185 at 201.522 kb on + strand, within SM_b20185 at 201.522 kb on + strand, within SM_b20185 at 201.523 kb on - strand, within SM_b20185 at 201.523 kb on - strand, within SM_b20185 at 201.523 kb on - strand, within SM_b20185 at 201.523 kb on - strand, within SM_b20185 at 201.523 kb on - strand, within SM_b20185 at 201.526 kb on + strand, within SM_b20185 at 201.526 kb on + strand, within SM_b20185 at 201.526 kb on + strand, within SM_b20185 at 201.526 kb on + strand, within SM_b20185 at 201.535 kb on + strand, within SM_b20185 at 201.535 kb on + strand, within SM_b20185 at 201.536 kb on - strand at 201.537 kb on + strand, within SM_b20185 at 201.695 kb on + strand, within SM_b20185 at 201.965 kb on + strand, within SM_b20185 at 201.988 kb on + strand, within SM_b20185 at 201.989 kb on - strand, within SM_b20185 at 202.096 kb on + strand at 202.097 kb on - strand at 202.097 kb on - strand at 202.098 kb on + strand at 202.099 kb on - strand at 202.099 kb on - strand at 202.146 kb on - strand at 202.146 kb on - strand at 202.185 kb on + strand at 202.265 kb on + strand at 202.558 kb on + strand, within SM_b20186 at 202.559 kb on - strand, within SM_b20186 at 202.559 kb on - strand, within SM_b20186 at 202.559 kb on - strand, within SM_b20186 at 202.559 kb on - strand, within SM_b20186 at 202.559 kb on - strand, within SM_b20186 at 202.592 kb on - strand, within SM_b20186 at 202.712 kb on + strand, within SM_b20186 at 202.975 kb on + strand at 203.056 kb on + strand at 203.057 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.4177863333 mM remove 200,421 + SM_b20183 0.68 -0.3 200,582 + -0.1 200,584 + -0.2 200,585 - -0.4 200,585 - -0.5 200,585 - -1.2 201,081 + SM_b20184 0.64 +0.4 201,226 - SM_b20184 0.83 +0.4 201,517 + SM_b20185 0.22 +0.4 201,517 + SM_b20185 0.22 -0.8 201,517 + SM_b20185 0.22 +0.4 201,517 + SM_b20185 0.22 -0.8 201,517 + SM_b20185 0.22 +0.1 201,518 - SM_b20185 0.22 +0.2 201,518 - SM_b20185 0.22 -0.3 201,519 + SM_b20185 0.22 -0.0 201,519 + SM_b20185 0.22 -3.9 201,520 - SM_b20185 0.22 -0.4 201,520 - SM_b20185 0.22 -0.4 201,522 + SM_b20185 0.23 -0.3 201,522 + SM_b20185 0.23 -0.7 201,522 + SM_b20185 0.23 -0.2 201,522 + SM_b20185 0.23 +0.5 201,523 - SM_b20185 0.23 -0.6 201,523 - SM_b20185 0.23 +2.6 201,523 - SM_b20185 0.23 +0.1 201,523 - SM_b20185 0.23 -0.2 201,523 - SM_b20185 0.23 +1.6 201,526 + SM_b20185 0.23 -2.6 201,526 + SM_b20185 0.23 -0.9 201,526 + SM_b20185 0.23 -0.5 201,526 + SM_b20185 0.23 -1.0 201,535 + SM_b20185 0.24 -0.8 201,535 + SM_b20185 0.24 +0.8 201,536 - +0.1 201,537 + SM_b20185 0.24 +1.0 201,695 + SM_b20185 0.44 +0.1 201,965 + SM_b20185 0.79 -1.1 201,988 + SM_b20185 0.81 -0.6 201,989 - SM_b20185 0.82 -0.5 202,096 + +0.3 202,097 - +0.9 202,097 - +0.4 202,098 + +0.4 202,099 - -1.1 202,099 - -0.0 202,146 - -0.2 202,146 - +0.1 202,185 + +1.0 202,265 + +0.4 202,558 + SM_b20186 0.53 +0.3 202,559 - SM_b20186 0.53 -0.1 202,559 - SM_b20186 0.53 -0.5 202,559 - SM_b20186 0.53 +0.2 202,559 - SM_b20186 0.53 -0.7 202,559 - SM_b20186 0.53 -0.4 202,592 - SM_b20186 0.59 +0.3 202,712 + SM_b20186 0.80 -0.1 202,975 + +0.6 203,056 + +0.6 203,057 - +0.9
Or see this region's nucleotide sequence