Experiment: 6-Pentyl-2H-pyran-2-one 0.4557668333 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc04242 and SMc04243 overlap by 1 nucleotides SMc04243 and SMc04244 overlap by 8 nucleotides SMc04244 and SMc04245 are separated by 177 nucleotides
SMc04242: SMc04242 - zinc uptake regulation protein, at 2,067,157 to 2,067,552
SMc04242
SMc04243: SMc04243 - high-affinity zinc uptake system membrane ABC transporter protein, at 2,067,552 to 2,068,379
SMc04243
SMc04244: SMc04244 - high-affinity zinc uptake system ATP-binding ABC transporter protein, at 2,068,372 to 2,069,247
SMc04244
SMc04245: SMc04245 - high-affinity zinc uptake system ABC transporter protein, at 2,069,425 to 2,070,447
SMc04245
Position (kb)
2068
2069
2070 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2067.473 kb on + strand at 2067.473 kb on + strand, within SMc04242 at 2067.474 kb on - strand, within SMc04242 at 2067.474 kb on - strand, within SMc04242 at 2067.547 kb on - strand at 2067.575 kb on + strand at 2067.650 kb on + strand, within SMc04243 at 2067.784 kb on - strand, within SMc04243 at 2067.945 kb on + strand, within SMc04243 at 2067.945 kb on + strand, within SMc04243 at 2067.949 kb on + strand, within SMc04243 at 2067.950 kb on - strand, within SMc04243 at 2067.950 kb on - strand, within SMc04243 at 2067.950 kb on - strand, within SMc04243 at 2067.950 kb on - strand, within SMc04243 at 2067.950 kb on - strand, within SMc04243 at 2068.194 kb on - strand, within SMc04243 at 2068.203 kb on + strand, within SMc04243 at 2068.204 kb on - strand, within SMc04243 at 2068.204 kb on - strand, within SMc04243 at 2068.280 kb on - strand, within SMc04243 at 2068.400 kb on + strand at 2068.505 kb on + strand, within SMc04244 at 2068.574 kb on + strand, within SMc04244 at 2068.574 kb on + strand, within SMc04244 at 2068.575 kb on - strand, within SMc04244 at 2068.575 kb on - strand, within SMc04244 at 2068.690 kb on - strand, within SMc04244 at 2068.779 kb on - strand, within SMc04244 at 2068.779 kb on - strand, within SMc04244 at 2068.903 kb on + strand, within SMc04244 at 2068.969 kb on - strand, within SMc04244 at 2068.969 kb on - strand, within SMc04244 at 2069.045 kb on + strand, within SMc04244 at 2069.046 kb on - strand, within SMc04244 at 2069.046 kb on - strand, within SMc04244 at 2069.150 kb on - strand, within SMc04244 at 2069.325 kb on - strand at 2069.332 kb on - strand at 2069.384 kb on + strand at 2069.598 kb on + strand, within SMc04245 at 2069.598 kb on + strand, within SMc04245 at 2069.599 kb on - strand, within SMc04245 at 2069.599 kb on - strand, within SMc04245 at 2069.602 kb on + strand, within SMc04245 at 2069.602 kb on + strand, within SMc04245 at 2069.603 kb on - strand, within SMc04245 at 2069.603 kb on - strand, within SMc04245 at 2069.700 kb on + strand, within SMc04245 at 2069.700 kb on + strand, within SMc04245 at 2069.700 kb on + strand, within SMc04245 at 2069.701 kb on - strand, within SMc04245 at 2069.940 kb on + strand, within SMc04245 at 2069.940 kb on + strand, within SMc04245 at 2069.940 kb on + strand, within SMc04245 at 2069.940 kb on + strand, within SMc04245 at 2069.940 kb on + strand, within SMc04245 at 2069.940 kb on + strand, within SMc04245 at 2069.940 kb on + strand, within SMc04245 at 2069.940 kb on + strand, within SMc04245 at 2069.940 kb on + strand, within SMc04245 at 2069.940 kb on + strand, within SMc04245 at 2069.940 kb on + strand, within SMc04245 at 2069.941 kb on - strand, within SMc04245 at 2069.941 kb on - strand, within SMc04245 at 2069.941 kb on - strand, within SMc04245 at 2069.941 kb on - strand, within SMc04245 at 2069.941 kb on - strand, within SMc04245 at 2069.941 kb on - strand, within SMc04245 at 2070.029 kb on - strand, within SMc04245 at 2070.029 kb on - strand, within SMc04245 at 2070.139 kb on + strand, within SMc04245 at 2070.140 kb on - strand, within SMc04245 at 2070.145 kb on + strand, within SMc04245 at 2070.145 kb on + strand, within SMc04245 at 2070.146 kb on - strand, within SMc04245
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.4557668333 mM remove 2,067,473 + +0.1 2,067,473 + SMc04242 0.80 -1.8 2,067,474 - SMc04242 0.80 +1.3 2,067,474 - SMc04242 0.80 +0.7 2,067,547 - +0.5 2,067,575 + -0.2 2,067,650 + SMc04243 0.12 -2.9 2,067,784 - SMc04243 0.28 +1.7 2,067,945 + SMc04243 0.47 +1.7 2,067,945 + SMc04243 0.47 +0.5 2,067,949 + SMc04243 0.48 +1.7 2,067,950 - SMc04243 0.48 -1.6 2,067,950 - SMc04243 0.48 -0.5 2,067,950 - SMc04243 0.48 +0.1 2,067,950 - SMc04243 0.48 -1.2 2,067,950 - SMc04243 0.48 -2.0 2,068,194 - SMc04243 0.78 -1.1 2,068,203 + SMc04243 0.79 -0.3 2,068,204 - SMc04243 0.79 +1.0 2,068,204 - SMc04243 0.79 -2.1 2,068,280 - SMc04243 0.88 -2.0 2,068,400 + +0.1 2,068,505 + SMc04244 0.15 -1.1 2,068,574 + SMc04244 0.23 -0.6 2,068,574 + SMc04244 0.23 -1.5 2,068,575 - SMc04244 0.23 +0.7 2,068,575 - SMc04244 0.23 -1.5 2,068,690 - SMc04244 0.36 -1.5 2,068,779 - SMc04244 0.46 -0.9 2,068,779 - SMc04244 0.46 -0.6 2,068,903 + SMc04244 0.61 +1.7 2,068,969 - SMc04244 0.68 -2.3 2,068,969 - SMc04244 0.68 -1.8 2,069,045 + SMc04244 0.77 +0.1 2,069,046 - SMc04244 0.77 -0.3 2,069,046 - SMc04244 0.77 -0.3 2,069,150 - SMc04244 0.89 -1.6 2,069,325 - +0.2 2,069,332 - -0.3 2,069,384 + -1.1 2,069,598 + SMc04245 0.17 -0.3 2,069,598 + SMc04245 0.17 -1.9 2,069,599 - SMc04245 0.17 +1.4 2,069,599 - SMc04245 0.17 -0.9 2,069,602 + SMc04245 0.17 -0.3 2,069,602 + SMc04245 0.17 -0.3 2,069,603 - SMc04245 0.17 +0.7 2,069,603 - SMc04245 0.17 -0.9 2,069,700 + SMc04245 0.27 -1.6 2,069,700 + SMc04245 0.27 -1.3 2,069,700 + SMc04245 0.27 -3.1 2,069,701 - SMc04245 0.27 +1.7 2,069,940 + SMc04245 0.50 +0.1 2,069,940 + SMc04245 0.50 +0.7 2,069,940 + SMc04245 0.50 +0.7 2,069,940 + SMc04245 0.50 -0.3 2,069,940 + SMc04245 0.50 +0.1 2,069,940 + SMc04245 0.50 +0.2 2,069,940 + SMc04245 0.50 -0.8 2,069,940 + SMc04245 0.50 -1.8 2,069,940 + SMc04245 0.50 -2.3 2,069,940 + SMc04245 0.50 -1.1 2,069,940 + SMc04245 0.50 +0.1 2,069,941 - SMc04245 0.50 -0.6 2,069,941 - SMc04245 0.50 -1.6 2,069,941 - SMc04245 0.50 +0.7 2,069,941 - SMc04245 0.50 +1.7 2,069,941 - SMc04245 0.50 +0.7 2,069,941 - SMc04245 0.50 -2.1 2,070,029 - SMc04245 0.59 -0.3 2,070,029 - SMc04245 0.59 -0.3 2,070,139 + SMc04245 0.70 -1.3 2,070,140 - SMc04245 0.70 +1.7 2,070,145 + SMc04245 0.70 -2.6 2,070,145 + SMc04245 0.70 +0.1 2,070,146 - SMc04245 0.70 -2.1
Or see this region's nucleotide sequence