Experiment: 6-Pentyl-2H-pyran-2-one 0.4557668333 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc02505 and SMc02504 are separated by 14 nucleotides SMc02504 and SMc02503 are separated by 103 nucleotides SMc02503 and SMc02502 are separated by 356 nucleotides SMc02502 and SMc02501 are separated by 116 nucleotides
SMc02505: SMc02505 - hypothetical protein, at 3,287,700 to 3,288,584
SMc02505
SMc02504: SMc02504 - transcriptional regulator, at 3,288,599 to 3,289,051
SMc02504
SMc02503: SMc02503 - hypothetical protein, at 3,289,155 to 3,290,258
SMc02503
SMc02502: SMc02502 - F0F1 ATP synthase subunit epsilon, at 3,290,615 to 3,291,025
SMc02502
SMc02501: SMc02501 - F0F1 ATP synthase subunit beta, at 3,291,142 to 3,292,656
SMc02501
Position (kb)
3289
3290
3291 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3288.185 kb on + strand, within SMc02505 at 3288.597 kb on + strand at 3288.598 kb on - strand at 3288.598 kb on - strand at 3288.852 kb on + strand, within SMc02504 at 3288.852 kb on + strand, within SMc02504 at 3288.853 kb on - strand, within SMc02504 at 3288.884 kb on + strand, within SMc02504 at 3289.052 kb on - strand at 3289.103 kb on + strand at 3289.139 kb on - strand at 3289.220 kb on + strand at 3289.230 kb on + strand at 3289.336 kb on + strand, within SMc02503 at 3289.639 kb on - strand, within SMc02503 at 3289.677 kb on + strand, within SMc02503 at 3289.677 kb on + strand, within SMc02503 at 3289.677 kb on + strand, within SMc02503 at 3289.678 kb on - strand, within SMc02503 at 3289.680 kb on - strand, within SMc02503 at 3289.770 kb on + strand, within SMc02503 at 3289.845 kb on + strand, within SMc02503 at 3289.846 kb on - strand, within SMc02503 at 3290.035 kb on - strand, within SMc02503 at 3290.049 kb on + strand, within SMc02503 at 3290.050 kb on - strand, within SMc02503 at 3290.218 kb on - strand at 3290.221 kb on - strand at 3290.221 kb on - strand at 3290.221 kb on - strand at 3290.525 kb on + strand at 3290.525 kb on + strand at 3290.526 kb on - strand at 3290.539 kb on - strand at 3290.593 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.4557668333 mM remove 3,288,185 + SMc02505 0.55 -0.0 3,288,597 + +0.0 3,288,598 - -0.3 3,288,598 - -0.0 3,288,852 + SMc02504 0.56 -1.4 3,288,852 + SMc02504 0.56 -0.9 3,288,853 - SMc02504 0.56 -1.1 3,288,884 + SMc02504 0.63 -1.4 3,289,052 - -3.0 3,289,103 + -0.5 3,289,139 - -1.3 3,289,220 + -1.7 3,289,230 + -1.0 3,289,336 + SMc02503 0.16 -1.4 3,289,639 - SMc02503 0.44 -1.6 3,289,677 + SMc02503 0.47 -1.7 3,289,677 + SMc02503 0.47 -0.8 3,289,677 + SMc02503 0.47 -0.9 3,289,678 - SMc02503 0.47 -3.1 3,289,680 - SMc02503 0.48 +1.0 3,289,770 + SMc02503 0.56 -1.6 3,289,845 + SMc02503 0.62 -0.4 3,289,846 - SMc02503 0.63 -1.2 3,290,035 - SMc02503 0.80 -1.4 3,290,049 + SMc02503 0.81 -1.4 3,290,050 - SMc02503 0.81 -0.4 3,290,218 - -0.2 3,290,221 - +1.8 3,290,221 - +2.8 3,290,221 - -0.1 3,290,525 + -0.2 3,290,525 + -1.1 3,290,526 - -0.2 3,290,539 - -0.1 3,290,593 - +0.6
Or see this region's nucleotide sequence