Experiment: 6-Pentyl-2H-pyran-2-one 0.4557668333 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1377 and SMa1379 are separated by 168 nucleotides SMa1379 and SMa1381 are separated by 100 nucleotides
SMa1377: SMa1377 - amidase, at 758,107 to 759,522
SMa1377
SMa1379: SMa1379 - ABC transporter substrate-binding protein, at 759,691 to 761,166
SMa1379
SMa1381: SMa1381 - oxidase, at 761,267 to 762,625
SMa1381
Position (kb) 759
760
761
762 Strain fitness (log2 ratio) -1
0
1
2 at 758.737 kb on + strand, within SMa1377 at 758.738 kb on - strand, within SMa1377 at 758.791 kb on + strand, within SMa1377 at 758.932 kb on - strand, within SMa1377 at 759.164 kb on - strand, within SMa1377 at 759.279 kb on + strand, within SMa1377 at 759.279 kb on + strand, within SMa1377 at 759.299 kb on - strand, within SMa1377 at 759.338 kb on + strand, within SMa1377 at 759.339 kb on - strand, within SMa1377 at 759.339 kb on - strand, within SMa1377 at 759.342 kb on + strand, within SMa1377 at 759.343 kb on - strand, within SMa1377 at 759.413 kb on + strand at 759.414 kb on - strand at 759.720 kb on + strand at 759.720 kb on + strand at 759.721 kb on - strand at 759.770 kb on + strand at 759.770 kb on + strand at 759.771 kb on - strand at 759.771 kb on - strand at 759.803 kb on + strand at 759.803 kb on + strand at 759.804 kb on - strand at 759.804 kb on - strand at 759.840 kb on - strand, within SMa1379 at 759.998 kb on + strand, within SMa1379 at 759.998 kb on + strand, within SMa1379 at 759.999 kb on - strand, within SMa1379 at 759.999 kb on - strand, within SMa1379 at 759.999 kb on - strand, within SMa1379 at 760.040 kb on + strand, within SMa1379 at 760.040 kb on + strand, within SMa1379 at 760.041 kb on - strand, within SMa1379 at 760.041 kb on - strand, within SMa1379 at 760.095 kb on - strand, within SMa1379 at 760.095 kb on - strand, within SMa1379 at 760.217 kb on + strand, within SMa1379 at 760.217 kb on + strand, within SMa1379 at 760.244 kb on + strand, within SMa1379 at 760.282 kb on + strand, within SMa1379 at 760.283 kb on - strand, within SMa1379 at 760.596 kb on + strand, within SMa1379 at 760.596 kb on + strand, within SMa1379 at 760.597 kb on - strand, within SMa1379 at 760.597 kb on - strand, within SMa1379 at 760.597 kb on - strand, within SMa1379 at 760.629 kb on - strand, within SMa1379 at 760.706 kb on + strand, within SMa1379 at 760.706 kb on + strand, within SMa1379 at 760.768 kb on + strand, within SMa1379 at 760.799 kb on + strand, within SMa1379 at 760.799 kb on + strand, within SMa1379 at 760.800 kb on - strand, within SMa1379 at 760.800 kb on - strand, within SMa1379 at 760.800 kb on - strand, within SMa1379 at 761.011 kb on - strand, within SMa1379 at 761.182 kb on - strand at 761.212 kb on + strand at 761.213 kb on - strand at 761.219 kb on - strand at 761.288 kb on - strand at 761.927 kb on - strand, within SMa1381
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.4557668333 mM remove 758,737 + SMa1377 0.44 -1.5 758,738 - SMa1377 0.45 +1.1 758,791 + SMa1377 0.48 +0.0 758,932 - SMa1377 0.58 +0.3 759,164 - SMa1377 0.75 -1.0 759,279 + SMa1377 0.83 +0.1 759,279 + SMa1377 0.83 -1.6 759,299 - SMa1377 0.84 +0.0 759,338 + SMa1377 0.87 -1.7 759,339 - SMa1377 0.87 +2.0 759,339 - SMa1377 0.87 -0.6 759,342 + SMa1377 0.87 -0.1 759,343 - SMa1377 0.87 +2.3 759,413 + -0.6 759,414 - -0.4 759,720 + +0.1 759,720 + +0.3 759,721 - +1.6 759,770 + +0.0 759,770 + -0.2 759,771 - -0.1 759,771 - +0.2 759,803 + +0.5 759,803 + -0.3 759,804 - +0.5 759,804 - +1.1 759,840 - SMa1379 0.10 -0.2 759,998 + SMa1379 0.21 -0.7 759,998 + SMa1379 0.21 +0.0 759,999 - SMa1379 0.21 -0.6 759,999 - SMa1379 0.21 +0.3 759,999 - SMa1379 0.21 -0.1 760,040 + SMa1379 0.24 +0.1 760,040 + SMa1379 0.24 -0.1 760,041 - SMa1379 0.24 -0.1 760,041 - SMa1379 0.24 -0.4 760,095 - SMa1379 0.27 +0.3 760,095 - SMa1379 0.27 -0.5 760,217 + SMa1379 0.36 -0.6 760,217 + SMa1379 0.36 -0.3 760,244 + SMa1379 0.37 -0.0 760,282 + SMa1379 0.40 +0.1 760,283 - SMa1379 0.40 -0.6 760,596 + SMa1379 0.61 +0.3 760,596 + SMa1379 0.61 +0.5 760,597 - SMa1379 0.61 -0.1 760,597 - SMa1379 0.61 -0.5 760,597 - SMa1379 0.61 -0.0 760,629 - SMa1379 0.64 -0.2 760,706 + SMa1379 0.69 -0.1 760,706 + SMa1379 0.69 -0.5 760,768 + SMa1379 0.73 -0.2 760,799 + SMa1379 0.75 -0.4 760,799 + SMa1379 0.75 -0.3 760,800 - SMa1379 0.75 -1.4 760,800 - SMa1379 0.75 +0.3 760,800 - SMa1379 0.75 -0.8 761,011 - SMa1379 0.89 -0.3 761,182 - -0.5 761,212 + +0.1 761,213 - +0.9 761,219 - +1.0 761,288 - -1.4 761,927 - SMa1381 0.49 +0.0
Or see this region's nucleotide sequence