Experiment: 6-Pentyl-2H-pyran-2-one 0.4557668333 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc04049 and SMc04050 are separated by 144 nucleotides SMc04050 and SMc04051 overlap by 4 nucleotides SMc04051 and SMc04052 are separated by 149 nucleotides SMc04052 and SMc04053 are separated by 152 nucleotides
SMc04049: SMc04049 - sulfite oxidase, at 3,053,090 to 3,054,289
SMc04049
SMc04050: SMc04050 - hypothetical protein, at 3,054,434 to 3,055,207
SMc04050
SMc04051: SMc04051 - RNA polymerase sigma-E factor (sigma-24) protein, at 3,055,204 to 3,055,740
SMc04051
SMc04052: SMc04052 - transcriptional regulator, at 3,055,890 to 3,056,336
SMc04052
SMc04053: SMc04053 - hypothetical protein, at 3,056,489 to 3,056,962
SMc04053
Position (kb)
3055
3056 Strain fitness (log2 ratio)
-1
0
1 at 3054.566 kb on + strand, within SMc04050 at 3054.566 kb on + strand, within SMc04050 at 3054.566 kb on + strand, within SMc04050 at 3054.567 kb on - strand, within SMc04050 at 3054.567 kb on - strand, within SMc04050 at 3054.702 kb on + strand, within SMc04050 at 3054.702 kb on + strand, within SMc04050 at 3054.702 kb on + strand, within SMc04050 at 3054.703 kb on - strand, within SMc04050 at 3054.709 kb on + strand, within SMc04050 at 3054.709 kb on + strand, within SMc04050 at 3054.709 kb on + strand, within SMc04050 at 3054.709 kb on + strand, within SMc04050 at 3054.709 kb on + strand, within SMc04050 at 3054.709 kb on + strand, within SMc04050 at 3054.710 kb on - strand, within SMc04050 at 3054.710 kb on - strand, within SMc04050 at 3054.710 kb on - strand, within SMc04050 at 3055.168 kb on - strand at 3055.168 kb on - strand at 3055.168 kb on - strand at 3055.168 kb on - strand at 3055.168 kb on - strand at 3055.260 kb on - strand, within SMc04051 at 3055.632 kb on + strand, within SMc04051 at 3055.691 kb on + strand at 3055.732 kb on - strand at 3055.851 kb on - strand at 3056.205 kb on - strand, within SMc04052 at 3056.316 kb on + strand at 3056.337 kb on - strand at 3056.337 kb on - strand at 3056.496 kb on + strand at 3056.497 kb on - strand at 3056.717 kb on + strand, within SMc04053 at 3056.725 kb on + strand, within SMc04053
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.4557668333 mM remove 3,054,566 + SMc04050 0.17 +0.4 3,054,566 + SMc04050 0.17 +0.4 3,054,566 + SMc04050 0.17 +0.1 3,054,567 - SMc04050 0.17 -0.2 3,054,567 - SMc04050 0.17 -0.0 3,054,702 + SMc04050 0.35 -1.4 3,054,702 + SMc04050 0.35 -0.3 3,054,702 + SMc04050 0.35 -0.2 3,054,703 - SMc04050 0.35 -0.2 3,054,709 + SMc04050 0.36 -0.2 3,054,709 + SMc04050 0.36 +0.4 3,054,709 + SMc04050 0.36 +0.2 3,054,709 + SMc04050 0.36 -1.1 3,054,709 + SMc04050 0.36 +0.5 3,054,709 + SMc04050 0.36 -0.4 3,054,710 - SMc04050 0.36 +0.7 3,054,710 - SMc04050 0.36 -0.1 3,054,710 - SMc04050 0.36 +0.8 3,055,168 - -0.4 3,055,168 - -0.3 3,055,168 - -0.1 3,055,168 - -0.2 3,055,168 - -0.1 3,055,260 - SMc04051 0.10 -0.8 3,055,632 + SMc04051 0.80 -0.9 3,055,691 + -0.4 3,055,732 - -0.0 3,055,851 - -0.2 3,056,205 - SMc04052 0.70 -0.2 3,056,316 + -0.0 3,056,337 - -1.3 3,056,337 - +1.5 3,056,496 + +0.8 3,056,497 - -0.1 3,056,717 + SMc04053 0.48 -0.0 3,056,725 + SMc04053 0.50 +0.5
Or see this region's nucleotide sequence