Experiment: 6-Pentyl-2H-pyran-2-one 0.4557668333 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa0830 and SMa0831 are separated by 495 nucleotides SMa0831 and SMa0833 are separated by 542 nucleotides SMa0833 and SMa0834 overlap by 4 nucleotides SMa0834 and SMa5036 overlap by 29 nucleotides
SMa0830: SMa0830 - nitrogenase molybdenum-cofactor biosynthesis protein NifE, at 457,737 to 459,167
SMa0830
SMa0831: SMa0831 - NifX iron-molybdenum cluster-binding protein, at 459,663 to 460,163
SMa0831
SMa0833: SMa0833 - hypothetical protein, at 460,706 to 460,846
SMa0833
SMa0834: SMa0834 - FdxB ferredoxin III, at 460,843 to 461,160
SMa0834
SMa5036: SMa5036 - hypothetical protein, at 461,132 to 461,632
SMa5036
Position (kb) 459
460
461 Strain fitness (log2 ratio) -1
0
1
2 at 458.811 kb on - strand, within SMa0830 at 458.871 kb on - strand, within SMa0830 at 458.921 kb on + strand, within SMa0830 at 458.921 kb on + strand, within SMa0830 at 459.170 kb on + strand at 459.170 kb on + strand at 459.171 kb on - strand at 459.424 kb on - strand at 459.438 kb on + strand at 459.456 kb on + strand at 459.633 kb on - strand at 459.765 kb on - strand, within SMa0831 at 459.814 kb on - strand, within SMa0831 at 459.952 kb on + strand, within SMa0831 at 459.953 kb on - strand, within SMa0831 at 459.953 kb on - strand, within SMa0831 at 460.207 kb on + strand at 460.482 kb on - strand at 460.573 kb on + strand at 460.619 kb on - strand at 460.713 kb on - strand at 460.744 kb on + strand, within SMa0833 at 460.891 kb on + strand, within SMa0834 at 460.892 kb on - strand, within SMa0834 at 460.895 kb on + strand, within SMa0834 at 460.941 kb on + strand, within SMa0834 at 460.962 kb on + strand, within SMa0834 at 460.962 kb on + strand, within SMa0834 at 460.979 kb on + strand, within SMa0834 at 460.989 kb on - strand, within SMa0834 at 461.049 kb on + strand, within SMa0834 at 461.148 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.4557668333 mM remove 458,811 - SMa0830 0.75 +0.2 458,871 - SMa0830 0.79 -0.0 458,921 + SMa0830 0.83 -0.4 458,921 + SMa0830 0.83 +0.8 459,170 + +0.2 459,170 + +1.0 459,171 - +0.0 459,424 - -1.2 459,438 + +1.1 459,456 + +0.3 459,633 - -0.5 459,765 - SMa0831 0.20 -0.7 459,814 - SMa0831 0.30 -0.5 459,952 + SMa0831 0.58 -0.1 459,953 - SMa0831 0.58 -0.8 459,953 - SMa0831 0.58 -0.1 460,207 + +0.2 460,482 - +0.8 460,573 + +0.2 460,619 - +0.5 460,713 - +1.8 460,744 + SMa0833 0.27 +0.1 460,891 + SMa0834 0.15 -0.5 460,892 - SMa0834 0.15 +1.8 460,895 + SMa0834 0.16 -0.1 460,941 + SMa0834 0.31 +0.5 460,962 + SMa0834 0.37 +0.2 460,962 + SMa0834 0.37 +0.6 460,979 + SMa0834 0.43 +0.8 460,989 - SMa0834 0.46 -0.5 461,049 + SMa0834 0.65 -0.1 461,148 - +0.2
Or see this region's nucleotide sequence