Experiment: 6-Pentyl-2H-pyran-2-one 0.4557668333 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa0809 and SMa0810 are separated by 619 nucleotides SMa0810 and SMa0811 are separated by 187 nucleotides SMa0811 and SMa0814 are separated by 30 nucleotides
SMa0809: SMa0809 - hypothetical protein, at 442,329 to 442,967
SMa0809
SMa0810: SMa0810 - nitrogen fixation protein FixU, at 443,587 to 443,793
SMa0810
SMa0811: SMa0811 - FdxN ferredoxin, at 443,981 to 444,175
SMa0811
SMa0814: SMa0814 - NifB FeMo cofactor biosynthesis protein, at 444,206 to 445,678
SMa0814
Position (kb) 443
444 Strain fitness (log2 ratio) -2
-1
0
1
2 at 442.844 kb on - strand, within SMa0809 at 442.844 kb on - strand, within SMa0809 at 442.987 kb on - strand at 443.049 kb on + strand at 443.050 kb on - strand at 443.050 kb on - strand at 443.242 kb on + strand at 443.243 kb on - strand at 443.310 kb on + strand at 443.364 kb on - strand at 443.366 kb on + strand at 443.398 kb on - strand at 443.461 kb on + strand at 443.462 kb on - strand at 443.557 kb on - strand at 443.681 kb on - strand, within SMa0810 at 443.695 kb on + strand, within SMa0810 at 443.696 kb on - strand, within SMa0810 at 443.751 kb on - strand, within SMa0810 at 443.751 kb on - strand, within SMa0810 at 443.855 kb on + strand at 443.855 kb on + strand at 443.856 kb on - strand at 443.856 kb on - strand at 443.861 kb on + strand at 443.861 kb on + strand at 443.861 kb on + strand at 443.862 kb on - strand at 443.862 kb on - strand at 443.862 kb on - strand at 443.862 kb on - strand at 443.944 kb on + strand at 443.945 kb on - strand at 443.945 kb on - strand at 443.968 kb on + strand at 443.968 kb on + strand at 443.968 kb on + strand at 443.968 kb on + strand at 443.969 kb on - strand at 443.969 kb on - strand at 444.082 kb on - strand, within SMa0811 at 444.179 kb on - strand at 444.224 kb on + strand at 444.283 kb on - strand at 444.283 kb on - strand at 444.343 kb on - strand at 444.375 kb on - strand, within SMa0814 at 444.375 kb on - strand, within SMa0814 at 444.493 kb on - strand, within SMa0814 at 444.493 kb on - strand, within SMa0814 at 444.493 kb on - strand, within SMa0814 at 444.579 kb on + strand, within SMa0814 at 444.580 kb on - strand, within SMa0814 at 444.593 kb on + strand, within SMa0814 at 444.623 kb on + strand, within SMa0814 at 444.624 kb on - strand at 444.624 kb on - strand, within SMa0814 at 444.684 kb on + strand, within SMa0814 at 444.684 kb on + strand, within SMa0814 at 444.685 kb on - strand, within SMa0814 at 444.685 kb on - strand, within SMa0814 at 444.685 kb on - strand, within SMa0814 at 444.689 kb on + strand, within SMa0814 at 444.690 kb on - strand, within SMa0814 at 444.749 kb on + strand, within SMa0814
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.4557668333 mM remove 442,844 - SMa0809 0.81 -0.2 442,844 - SMa0809 0.81 -0.4 442,987 - +0.2 443,049 + +0.8 443,050 - +1.4 443,050 - -1.5 443,242 + +0.6 443,243 - +0.8 443,310 + -0.2 443,364 - +0.3 443,366 + -0.2 443,398 - -0.2 443,461 + -1.1 443,462 - -0.6 443,557 - -0.8 443,681 - SMa0810 0.45 +0.4 443,695 + SMa0810 0.52 -1.4 443,696 - SMa0810 0.53 -0.5 443,751 - SMa0810 0.79 +0.5 443,751 - SMa0810 0.79 -1.3 443,855 + -1.7 443,855 + +0.5 443,856 - -1.7 443,856 - -0.9 443,861 + -0.1 443,861 + -0.6 443,861 + +0.4 443,862 - -0.3 443,862 - +0.8 443,862 - -0.5 443,862 - -1.0 443,944 + +0.6 443,945 - -0.8 443,945 - -0.4 443,968 + +0.8 443,968 + +0.6 443,968 + -0.6 443,968 + -0.4 443,969 - -0.8 443,969 - -0.5 444,082 - SMa0811 0.52 -0.8 444,179 - +0.0 444,224 + -0.3 444,283 - -0.1 444,283 - -0.5 444,343 - +1.1 444,375 - SMa0814 0.11 -0.2 444,375 - SMa0814 0.11 +0.4 444,493 - SMa0814 0.19 -0.4 444,493 - SMa0814 0.19 -0.2 444,493 - SMa0814 0.19 -1.8 444,579 + SMa0814 0.25 -0.1 444,580 - SMa0814 0.25 -0.3 444,593 + SMa0814 0.26 +0.8 444,623 + SMa0814 0.28 -0.0 444,624 - +0.2 444,624 - SMa0814 0.28 -1.5 444,684 + SMa0814 0.32 +1.8 444,684 + SMa0814 0.32 -0.1 444,685 - SMa0814 0.33 +0.4 444,685 - SMa0814 0.33 +0.9 444,685 - SMa0814 0.33 -0.6 444,689 + SMa0814 0.33 -1.2 444,690 - SMa0814 0.33 -0.5 444,749 + SMa0814 0.37 -0.5
Or see this region's nucleotide sequence