Experiment: 6-Pentyl-2H-pyran-2-one 0.4557668333 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21267 and SM_b21268 are separated by 151 nucleotides SM_b21268 and SM_b21269 overlap by 53 nucleotides SM_b21269 and SM_b21270 are separated by 96 nucleotides SM_b21270 and SM_b21271 are separated by 83 nucleotides
SM_b21267: SM_b21267 - hypothetical protein, at 840,855 to 841,532
_b21267
SM_b21268: SM_b21268 - hypothetical protein, at 841,684 to 842,397
_b21268
SM_b21269: SM_b21269 - ABC transporter ATPase, at 842,345 to 844,435
_b21269
SM_b21270: SM_b21270 - transcriptional regulator, at 844,532 to 844,996
_b21270
SM_b21271: SM_b21271 - nucleotide-binding protein, at 845,080 to 845,829
_b21271
Position (kb)
842
843
844
845 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 841.459 kb on + strand, within SM_b21267 at 841.459 kb on + strand, within SM_b21267 at 841.460 kb on - strand at 841.526 kb on + strand at 841.526 kb on + strand at 841.527 kb on - strand at 841.527 kb on - strand at 841.527 kb on - strand at 841.527 kb on - strand at 841.538 kb on + strand at 841.538 kb on + strand at 841.545 kb on + strand at 841.545 kb on + strand at 841.545 kb on + strand at 841.546 kb on - strand at 841.663 kb on + strand at 841.704 kb on + strand at 841.704 kb on + strand at 841.705 kb on - strand at 841.705 kb on - strand at 841.744 kb on + strand at 841.744 kb on + strand at 841.782 kb on - strand, within SM_b21268 at 841.813 kb on + strand, within SM_b21268 at 841.814 kb on - strand, within SM_b21268 at 842.041 kb on + strand, within SM_b21268 at 842.042 kb on - strand, within SM_b21268 at 842.043 kb on + strand, within SM_b21268 at 842.043 kb on + strand, within SM_b21268 at 842.043 kb on + strand, within SM_b21268 at 842.049 kb on + strand, within SM_b21268 at 842.049 kb on + strand, within SM_b21268 at 842.049 kb on + strand, within SM_b21268 at 842.050 kb on - strand, within SM_b21268 at 842.050 kb on - strand, within SM_b21268 at 842.053 kb on + strand, within SM_b21268 at 842.054 kb on - strand, within SM_b21268 at 842.054 kb on - strand, within SM_b21268 at 842.336 kb on - strand at 842.455 kb on + strand at 842.456 kb on - strand at 842.456 kb on - strand at 842.517 kb on - strand at 842.525 kb on + strand at 842.526 kb on - strand at 842.591 kb on + strand, within SM_b21269 at 842.592 kb on - strand, within SM_b21269 at 842.607 kb on - strand, within SM_b21269 at 842.663 kb on + strand, within SM_b21269 at 842.732 kb on - strand at 842.732 kb on - strand, within SM_b21269 at 842.735 kb on + strand, within SM_b21269 at 843.010 kb on - strand, within SM_b21269 at 843.022 kb on + strand, within SM_b21269 at 843.024 kb on + strand, within SM_b21269 at 843.024 kb on + strand, within SM_b21269 at 843.025 kb on - strand, within SM_b21269 at 843.025 kb on - strand, within SM_b21269 at 843.060 kb on + strand, within SM_b21269 at 843.061 kb on - strand, within SM_b21269 at 843.065 kb on + strand, within SM_b21269 at 843.251 kb on + strand, within SM_b21269 at 843.482 kb on + strand, within SM_b21269 at 843.482 kb on + strand, within SM_b21269 at 843.483 kb on - strand, within SM_b21269 at 843.483 kb on - strand, within SM_b21269 at 843.588 kb on + strand, within SM_b21269 at 843.617 kb on + strand, within SM_b21269 at 843.754 kb on - strand, within SM_b21269 at 843.754 kb on - strand, within SM_b21269 at 843.822 kb on - strand, within SM_b21269 at 843.942 kb on - strand, within SM_b21269 at 843.942 kb on - strand, within SM_b21269 at 843.957 kb on - strand, within SM_b21269 at 843.957 kb on - strand, within SM_b21269 at 843.957 kb on - strand, within SM_b21269 at 844.076 kb on + strand, within SM_b21269 at 844.078 kb on + strand, within SM_b21269 at 844.079 kb on - strand, within SM_b21269 at 844.196 kb on + strand, within SM_b21269 at 844.299 kb on + strand at 844.416 kb on - strand at 844.416 kb on - strand at 844.416 kb on - strand at 844.438 kb on + strand at 844.438 kb on + strand at 844.438 kb on + strand at 844.438 kb on + strand at 844.439 kb on - strand at 844.439 kb on - strand at 844.439 kb on - strand at 844.439 kb on - strand at 844.439 kb on - strand at 844.441 kb on + strand at 844.441 kb on + strand at 844.442 kb on - strand at 844.442 kb on - strand at 844.442 kb on - strand at 844.463 kb on + strand at 844.463 kb on + strand at 844.463 kb on + strand at 844.464 kb on - strand at 844.464 kb on - strand at 844.464 kb on - strand at 844.532 kb on - strand at 844.539 kb on + strand at 844.638 kb on - strand, within SM_b21270 at 844.688 kb on + strand, within SM_b21270 at 844.688 kb on + strand, within SM_b21270 at 844.689 kb on - strand, within SM_b21270 at 845.068 kb on + strand at 845.069 kb on - strand at 845.096 kb on - strand at 845.096 kb on - strand at 845.113 kb on + strand at 845.224 kb on + strand, within SM_b21271 at 845.225 kb on - strand, within SM_b21271 at 845.225 kb on - strand, within SM_b21271 at 845.227 kb on - strand, within SM_b21271
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.4557668333 mM remove 841,459 + SM_b21267 0.89 -0.7 841,459 + SM_b21267 0.89 +0.1 841,460 - +0.7 841,526 + +0.8 841,526 + -0.6 841,527 - +0.1 841,527 - -0.0 841,527 - -0.4 841,527 - +1.7 841,538 + +0.1 841,538 + +0.1 841,545 + -0.1 841,545 + +0.2 841,545 + -0.9 841,546 - +3.5 841,663 + +0.0 841,704 + -0.0 841,704 + -0.2 841,705 - +0.5 841,705 - -3.4 841,744 + +1.0 841,744 + -0.5 841,782 - SM_b21268 0.14 -1.9 841,813 + SM_b21268 0.18 -2.1 841,814 - SM_b21268 0.18 -2.6 842,041 + SM_b21268 0.50 -1.8 842,042 - SM_b21268 0.50 -1.8 842,043 + SM_b21268 0.50 -1.3 842,043 + SM_b21268 0.50 +0.1 842,043 + SM_b21268 0.50 -2.2 842,049 + SM_b21268 0.51 -0.0 842,049 + SM_b21268 0.51 -1.1 842,049 + SM_b21268 0.51 -1.3 842,050 - SM_b21268 0.51 -1.1 842,050 - SM_b21268 0.51 -1.1 842,053 + SM_b21268 0.52 -0.9 842,054 - SM_b21268 0.52 +0.5 842,054 - SM_b21268 0.52 -2.8 842,336 - -1.8 842,455 + -1.7 842,456 - -2.2 842,456 - -2.2 842,517 - -0.3 842,525 + -1.7 842,526 - -1.3 842,591 + SM_b21269 0.12 -0.6 842,592 - SM_b21269 0.12 -1.5 842,607 - SM_b21269 0.13 -0.6 842,663 + SM_b21269 0.15 -1.6 842,732 - +0.7 842,732 - SM_b21269 0.19 -0.8 842,735 + SM_b21269 0.19 -1.7 843,010 - SM_b21269 0.32 -2.4 843,022 + SM_b21269 0.32 -0.3 843,024 + SM_b21269 0.32 -1.8 843,024 + SM_b21269 0.32 +0.7 843,025 - SM_b21269 0.33 -0.7 843,025 - SM_b21269 0.33 -1.8 843,060 + SM_b21269 0.34 -2.0 843,061 - SM_b21269 0.34 -1.7 843,065 + SM_b21269 0.34 -2.6 843,251 + SM_b21269 0.43 -0.5 843,482 + SM_b21269 0.54 -1.1 843,482 + SM_b21269 0.54 -2.2 843,483 - SM_b21269 0.54 +1.1 843,483 - SM_b21269 0.54 -1.0 843,588 + SM_b21269 0.59 -0.4 843,617 + SM_b21269 0.61 -1.1 843,754 - SM_b21269 0.67 -1.9 843,754 - SM_b21269 0.67 -4.0 843,822 - SM_b21269 0.71 -1.9 843,942 - SM_b21269 0.76 -1.4 843,942 - SM_b21269 0.76 -2.3 843,957 - SM_b21269 0.77 -2.1 843,957 - SM_b21269 0.77 -1.2 843,957 - SM_b21269 0.77 -3.0 844,076 + SM_b21269 0.83 -1.3 844,078 + SM_b21269 0.83 -2.3 844,079 - SM_b21269 0.83 +0.1 844,196 + SM_b21269 0.89 -1.0 844,299 + -1.0 844,416 - -0.9 844,416 - +0.1 844,416 - +0.4 844,438 + -0.6 844,438 + -0.0 844,438 + -2.1 844,438 + +0.1 844,439 - -0.6 844,439 - -0.4 844,439 - +0.3 844,439 - -0.6 844,439 - -1.8 844,441 + -1.0 844,441 + +0.2 844,442 - -0.7 844,442 - +1.7 844,442 - -0.0 844,463 + +0.0 844,463 + -0.5 844,463 + -0.1 844,464 - -0.7 844,464 - +0.0 844,464 - -0.1 844,532 - -0.3 844,539 + +0.2 844,638 - SM_b21270 0.23 +0.9 844,688 + SM_b21270 0.34 -0.9 844,688 + SM_b21270 0.34 +0.1 844,689 - SM_b21270 0.34 -0.3 845,068 + +0.1 845,069 - +2.1 845,096 - +0.9 845,096 - +0.3 845,113 + +0.7 845,224 + SM_b21271 0.19 +0.1 845,225 - SM_b21271 0.19 +0.1 845,225 - SM_b21271 0.19 +0.9 845,227 - SM_b21271 0.20 +0.4
Or see this region's nucleotide sequence