Experiment: 6-Pentyl-2H-pyran-2-one 0.4557668333 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21255 and SM_b21256 overlap by 11 nucleotides SM_b21256 and SM_b21257 are separated by 351 nucleotides
SM_b21255: SM_b21255 - hypothetical protein, at 825,490 to 826,692
_b21255
SM_b21256: SM_b21256 - nucleotide sugar oxidase, at 826,682 to 828,115
_b21256
SM_b21257: SM_b21257 - adenylate cyclase, at 828,467 to 829,486
_b21257
Position (kb) 826
827
828
829 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 825.928 kb on + strand, within SM_b21255 at 825.928 kb on + strand, within SM_b21255 at 825.929 kb on - strand, within SM_b21255 at 825.929 kb on - strand, within SM_b21255 at 825.954 kb on - strand, within SM_b21255 at 826.496 kb on + strand, within SM_b21255 at 826.497 kb on - strand, within SM_b21255 at 826.497 kb on - strand, within SM_b21255 at 826.542 kb on + strand, within SM_b21255 at 826.543 kb on - strand, within SM_b21255 at 826.572 kb on + strand at 826.572 kb on + strand at 826.572 kb on + strand at 826.573 kb on - strand at 826.573 kb on - strand at 826.573 kb on - strand at 826.669 kb on - strand at 826.776 kb on + strand at 826.914 kb on + strand, within SM_b21256 at 826.915 kb on - strand, within SM_b21256 at 826.952 kb on + strand, within SM_b21256 at 826.952 kb on + strand, within SM_b21256 at 827.002 kb on - strand, within SM_b21256 at 827.142 kb on - strand, within SM_b21256 at 827.142 kb on - strand, within SM_b21256 at 827.148 kb on + strand, within SM_b21256 at 827.173 kb on - strand, within SM_b21256 at 827.173 kb on - strand, within SM_b21256 at 827.220 kb on + strand, within SM_b21256 at 827.233 kb on - strand, within SM_b21256 at 827.233 kb on - strand, within SM_b21256 at 827.295 kb on + strand, within SM_b21256 at 827.345 kb on - strand, within SM_b21256 at 827.490 kb on + strand, within SM_b21256 at 827.491 kb on - strand, within SM_b21256 at 827.587 kb on + strand, within SM_b21256 at 827.607 kb on + strand, within SM_b21256 at 827.607 kb on + strand, within SM_b21256 at 827.608 kb on - strand, within SM_b21256 at 827.671 kb on + strand, within SM_b21256 at 827.672 kb on - strand, within SM_b21256 at 827.835 kb on + strand, within SM_b21256 at 827.836 kb on - strand, within SM_b21256 at 827.836 kb on - strand, within SM_b21256 at 828.239 kb on + strand at 828.239 kb on + strand at 828.299 kb on + strand at 828.300 kb on - strand at 828.689 kb on - strand, within SM_b21257 at 828.754 kb on + strand, within SM_b21257 at 828.755 kb on + strand, within SM_b21257 at 828.758 kb on + strand, within SM_b21257 at 828.759 kb on - strand, within SM_b21257 at 828.759 kb on - strand, within SM_b21257 at 828.759 kb on - strand, within SM_b21257 at 828.759 kb on - strand, within SM_b21257 at 828.762 kb on - strand, within SM_b21257 at 828.866 kb on + strand, within SM_b21257 at 828.866 kb on + strand, within SM_b21257 at 828.867 kb on - strand, within SM_b21257 at 828.867 kb on - strand, within SM_b21257 at 828.870 kb on + strand, within SM_b21257 at 828.870 kb on + strand, within SM_b21257 at 828.870 kb on + strand, within SM_b21257 at 828.871 kb on - strand, within SM_b21257 at 828.871 kb on - strand, within SM_b21257 at 829.039 kb on + strand, within SM_b21257 at 829.039 kb on + strand, within SM_b21257 at 829.039 kb on + strand, within SM_b21257 at 829.039 kb on + strand, within SM_b21257 at 829.040 kb on - strand, within SM_b21257 at 829.052 kb on + strand, within SM_b21257 at 829.052 kb on + strand, within SM_b21257 at 829.052 kb on + strand, within SM_b21257 at 829.052 kb on + strand, within SM_b21257 at 829.053 kb on - strand, within SM_b21257 at 829.053 kb on - strand, within SM_b21257 at 829.053 kb on - strand, within SM_b21257 at 829.053 kb on - strand, within SM_b21257 at 829.081 kb on - strand, within SM_b21257
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.4557668333 mM remove 825,928 + SM_b21255 0.36 +1.7 825,928 + SM_b21255 0.36 -1.5 825,929 - SM_b21255 0.36 +0.4 825,929 - SM_b21255 0.36 -0.4 825,954 - SM_b21255 0.39 +0.0 826,496 + SM_b21255 0.84 -0.5 826,497 - SM_b21255 0.84 -0.6 826,497 - SM_b21255 0.84 -0.3 826,542 + SM_b21255 0.87 -0.4 826,543 - SM_b21255 0.88 +0.7 826,572 + +0.5 826,572 + -0.1 826,572 + +0.9 826,573 - -0.3 826,573 - +0.3 826,573 - +0.4 826,669 - -0.1 826,776 + -1.8 826,914 + SM_b21256 0.16 -2.1 826,915 - SM_b21256 0.16 +0.4 826,952 + SM_b21256 0.19 -1.7 826,952 + SM_b21256 0.19 -1.3 827,002 - SM_b21256 0.22 -0.3 827,142 - SM_b21256 0.32 -1.9 827,142 - SM_b21256 0.32 -1.8 827,148 + SM_b21256 0.32 -1.5 827,173 - SM_b21256 0.34 -2.7 827,173 - SM_b21256 0.34 -1.1 827,220 + SM_b21256 0.38 -1.7 827,233 - SM_b21256 0.38 -1.5 827,233 - SM_b21256 0.38 -3.0 827,295 + SM_b21256 0.43 -2.9 827,345 - SM_b21256 0.46 -0.9 827,490 + SM_b21256 0.56 -2.5 827,491 - SM_b21256 0.56 -2.2 827,587 + SM_b21256 0.63 -0.6 827,607 + SM_b21256 0.65 +0.1 827,607 + SM_b21256 0.65 -0.6 827,608 - SM_b21256 0.65 -2.2 827,671 + SM_b21256 0.69 -1.5 827,672 - SM_b21256 0.69 -3.1 827,835 + SM_b21256 0.80 -2.4 827,836 - SM_b21256 0.80 -2.0 827,836 - SM_b21256 0.80 -1.1 828,239 + +0.0 828,239 + -0.0 828,299 + +0.0 828,300 - -0.0 828,689 - SM_b21257 0.22 -0.2 828,754 + SM_b21257 0.28 +0.0 828,755 + SM_b21257 0.28 +0.1 828,758 + SM_b21257 0.29 +0.1 828,759 - SM_b21257 0.29 +0.5 828,759 - SM_b21257 0.29 -0.2 828,759 - SM_b21257 0.29 +0.7 828,759 - SM_b21257 0.29 -0.7 828,762 - SM_b21257 0.29 +0.6 828,866 + SM_b21257 0.39 +0.7 828,866 + SM_b21257 0.39 +0.3 828,867 - SM_b21257 0.39 +0.3 828,867 - SM_b21257 0.39 -0.8 828,870 + SM_b21257 0.40 -0.5 828,870 + SM_b21257 0.40 +0.7 828,870 + SM_b21257 0.40 -0.3 828,871 - SM_b21257 0.40 +0.2 828,871 - SM_b21257 0.40 +0.1 829,039 + SM_b21257 0.56 -0.5 829,039 + SM_b21257 0.56 +0.1 829,039 + SM_b21257 0.56 -1.0 829,039 + SM_b21257 0.56 +2.0 829,040 - SM_b21257 0.56 +0.2 829,052 + SM_b21257 0.57 +0.2 829,052 + SM_b21257 0.57 +0.1 829,052 + SM_b21257 0.57 +0.3 829,052 + SM_b21257 0.57 +0.1 829,053 - SM_b21257 0.57 +0.3 829,053 - SM_b21257 0.57 -0.1 829,053 - SM_b21257 0.57 +0.0 829,053 - SM_b21257 0.57 -0.1 829,081 - SM_b21257 0.60 -0.7
Or see this region's nucleotide sequence