Experiment: 6-Pentyl-2H-pyran-2-one 0.4557668333 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa1757 and SMa1759 are separated by 45 nucleotides SMa1759 and SMa1760 overlap by 27 nucleotides
SMa1757: SMa1757 - Short chain, at 999,071 to 999,841
SMa1757
SMa1759: SMa1759 - GntR family transcriptional regulator, at 999,887 to 1,000,567
SMa1759
SMa1760: SMa1760 - phosphotransferase, at 1,000,541 to 1,001,788
SMa1760
Position (kb)
999
1000
1001 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 999.117 kb on + strand at 999.117 kb on + strand at 999.118 kb on - strand at 999.118 kb on - strand at 999.232 kb on + strand, within SMa1757 at 999.388 kb on + strand, within SMa1757 at 999.389 kb on - strand, within SMa1757 at 999.489 kb on - strand, within SMa1757 at 999.489 kb on - strand, within SMa1757 at 999.653 kb on - strand, within SMa1757 at 999.746 kb on + strand, within SMa1757 at 999.792 kb on + strand at 999.792 kb on + strand at 999.792 kb on + strand at 999.793 kb on - strand at 999.926 kb on - strand at 999.958 kb on + strand, within SMa1759 at 999.959 kb on - strand, within SMa1759 at 999.959 kb on - strand, within SMa1759 at 1000.059 kb on + strand, within SMa1759 at 1000.060 kb on - strand, within SMa1759 at 1000.060 kb on - strand, within SMa1759 at 1000.221 kb on - strand, within SMa1759 at 1000.243 kb on + strand, within SMa1759 at 1000.249 kb on + strand, within SMa1759 at 1000.260 kb on - strand, within SMa1759 at 1000.631 kb on + strand at 1000.632 kb on - strand at 1000.632 kb on - strand at 1000.691 kb on + strand, within SMa1760 at 1000.838 kb on + strand, within SMa1760 at 1000.838 kb on + strand, within SMa1760 at 1000.838 kb on + strand, within SMa1760 at 1000.838 kb on + strand, within SMa1760 at 1001.031 kb on + strand, within SMa1760 at 1001.032 kb on - strand, within SMa1760 at 1001.101 kb on + strand, within SMa1760 at 1001.101 kb on + strand, within SMa1760 at 1001.101 kb on + strand, within SMa1760 at 1001.102 kb on - strand, within SMa1760 at 1001.102 kb on - strand, within SMa1760
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.4557668333 mM remove 999,117 + +0.0 999,117 + -0.2 999,118 - -0.3 999,118 - +0.0 999,232 + SMa1757 0.21 -0.7 999,388 + SMa1757 0.41 +0.2 999,389 - SMa1757 0.41 -0.2 999,489 - SMa1757 0.54 +0.8 999,489 - SMa1757 0.54 -0.5 999,653 - SMa1757 0.75 +0.4 999,746 + SMa1757 0.88 -0.3 999,792 + -0.6 999,792 + -0.2 999,792 + +1.8 999,793 - -1.0 999,926 - -0.2 999,958 + SMa1759 0.10 +0.2 999,959 - SMa1759 0.11 +0.4 999,959 - SMa1759 0.11 +0.5 1,000,059 + SMa1759 0.25 +1.8 1,000,060 - SMa1759 0.25 -0.0 1,000,060 - SMa1759 0.25 +1.2 1,000,221 - SMa1759 0.49 -0.6 1,000,243 + SMa1759 0.52 +0.3 1,000,249 + SMa1759 0.53 +0.4 1,000,260 - SMa1759 0.55 +2.1 1,000,631 + -0.4 1,000,632 - -0.3 1,000,632 - -0.5 1,000,691 + SMa1760 0.12 -2.4 1,000,838 + SMa1760 0.24 -0.1 1,000,838 + SMa1760 0.24 -0.5 1,000,838 + SMa1760 0.24 -0.3 1,000,838 + SMa1760 0.24 +0.4 1,001,031 + SMa1760 0.39 +0.1 1,001,032 - SMa1760 0.39 -1.5 1,001,101 + SMa1760 0.45 -0.7 1,001,101 + SMa1760 0.45 -0.4 1,001,101 + SMa1760 0.45 +1.2 1,001,102 - SMa1760 0.45 +0.1 1,001,102 - SMa1760 0.45 +0.5
Or see this region's nucleotide sequence