Experiment: LB no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc03023 and SMc03024 are separated by 1 nucleotides SMc03024 and SMc03025 are separated by 45 nucleotides SMc03025 and SMc03026 overlap by 4 nucleotides SMc03026 and SMc03027 are separated by 307 nucleotides
SMc03023: SMc03023 - hypothetical protein, at 721,127 to 721,906
SMc03023
SMc03024: SMc03024 - flagellar basal body rod protein FlgF, at 721,908 to 722,633
SMc03024
SMc03025: SMc03025 - flagellum-specific ATP synthase, at 722,679 to 724,082
SMc03025
SMc03026: SMc03026 - hypothetical protein, at 724,079 to 724,630
SMc03026
SMc03027: SMc03027 - flagellar basal body rod protein FlgB, at 724,938 to 725,318
SMc03027
Position (kb) 722
723
724
725 Strain fitness (log2 ratio) -1
0
1 at 721.706 kb on + strand, within SMc03023 at 721.707 kb on - strand, within SMc03023 at 721.923 kb on + strand at 721.923 kb on + strand at 721.924 kb on - strand at 721.982 kb on + strand, within SMc03024 at 722.070 kb on + strand, within SMc03024 at 722.071 kb on - strand, within SMc03024 at 722.071 kb on - strand, within SMc03024 at 722.071 kb on - strand, within SMc03024 at 722.243 kb on - strand, within SMc03024 at 722.377 kb on - strand, within SMc03024 at 722.377 kb on - strand, within SMc03024 at 722.377 kb on - strand, within SMc03024 at 722.410 kb on - strand, within SMc03024 at 722.515 kb on + strand, within SMc03024 at 722.516 kb on - strand, within SMc03024 at 722.516 kb on - strand, within SMc03024 at 722.573 kb on + strand at 722.573 kb on + strand at 722.574 kb on - strand at 722.574 kb on - strand at 722.751 kb on + strand at 722.814 kb on + strand at 722.814 kb on + strand at 722.815 kb on - strand at 722.815 kb on - strand at 722.815 kb on - strand at 722.815 kb on - strand at 723.169 kb on + strand, within SMc03025 at 723.767 kb on - strand, within SMc03025 at 723.934 kb on + strand, within SMc03025 at 723.935 kb on - strand, within SMc03025 at 723.955 kb on - strand at 724.158 kb on + strand, within SMc03026 at 724.158 kb on + strand, within SMc03026 at 724.159 kb on - strand, within SMc03026 at 724.159 kb on - strand at 724.211 kb on + strand, within SMc03026 at 724.212 kb on - strand, within SMc03026 at 724.217 kb on + strand, within SMc03026 at 724.218 kb on - strand, within SMc03026 at 724.514 kb on + strand, within SMc03026 at 724.514 kb on + strand, within SMc03026 at 724.514 kb on + strand, within SMc03026 at 724.514 kb on + strand, within SMc03026 at 724.514 kb on + strand, within SMc03026 at 724.514 kb on + strand, within SMc03026 at 724.514 kb on + strand, within SMc03026 at 724.514 kb on + strand, within SMc03026 at 724.514 kb on + strand, within SMc03026 at 724.515 kb on - strand, within SMc03026 at 724.515 kb on - strand, within SMc03026 at 724.515 kb on - strand, within SMc03026 at 724.515 kb on - strand, within SMc03026 at 724.515 kb on - strand, within SMc03026 at 724.515 kb on - strand, within SMc03026 at 724.516 kb on + strand, within SMc03026 at 724.517 kb on - strand, within SMc03026 at 724.517 kb on - strand, within SMc03026 at 724.526 kb on - strand, within SMc03026 at 724.828 kb on - strand at 724.863 kb on + strand at 724.863 kb on + strand at 724.864 kb on - strand at 724.864 kb on - strand at 724.909 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB no stress control remove 721,706 + SMc03023 0.74 -0.1 721,707 - SMc03023 0.74 -0.8 721,923 + -0.5 721,923 + -1.1 721,924 - -0.1 721,982 + SMc03024 0.10 +0.5 722,070 + SMc03024 0.22 -0.0 722,071 - SMc03024 0.22 -0.6 722,071 - SMc03024 0.22 +0.4 722,071 - SMc03024 0.22 -0.2 722,243 - SMc03024 0.46 -0.1 722,377 - SMc03024 0.65 -0.2 722,377 - SMc03024 0.65 -0.0 722,377 - SMc03024 0.65 +1.2 722,410 - SMc03024 0.69 +0.3 722,515 + SMc03024 0.84 +0.3 722,516 - SMc03024 0.84 +0.9 722,516 - SMc03024 0.84 +1.6 722,573 + +0.1 722,573 + -0.4 722,574 - +0.6 722,574 - +0.5 722,751 + +0.2 722,814 + +0.1 722,814 + +0.1 722,815 - -0.3 722,815 - -0.0 722,815 - -0.5 722,815 - +0.4 723,169 + SMc03025 0.35 +0.8 723,767 - SMc03025 0.77 +0.4 723,934 + SMc03025 0.89 -0.1 723,935 - SMc03025 0.89 +0.3 723,955 - -0.1 724,158 + SMc03026 0.14 +0.1 724,158 + SMc03026 0.14 -0.1 724,159 - SMc03026 0.14 -0.6 724,159 - -1.3 724,211 + SMc03026 0.24 +0.1 724,212 - SMc03026 0.24 -0.1 724,217 + SMc03026 0.25 -0.6 724,218 - SMc03026 0.25 +0.2 724,514 + SMc03026 0.79 -0.6 724,514 + SMc03026 0.79 -0.7 724,514 + SMc03026 0.79 +0.1 724,514 + SMc03026 0.79 -0.1 724,514 + SMc03026 0.79 -0.8 724,514 + SMc03026 0.79 -0.2 724,514 + SMc03026 0.79 +0.1 724,514 + SMc03026 0.79 -0.4 724,514 + SMc03026 0.79 +0.2 724,515 - SMc03026 0.79 +0.1 724,515 - SMc03026 0.79 -0.4 724,515 - SMc03026 0.79 -0.5 724,515 - SMc03026 0.79 -0.6 724,515 - SMc03026 0.79 +0.3 724,515 - SMc03026 0.79 -0.0 724,516 + SMc03026 0.79 -0.4 724,517 - SMc03026 0.79 -0.9 724,517 - SMc03026 0.79 -1.3 724,526 - SMc03026 0.81 -0.4 724,828 - +0.3 724,863 + -0.5 724,863 + +0.6 724,864 - +0.2 724,864 - -0.1 724,909 - +0.5
Or see this region's nucleotide sequence