Experiment: LB no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa0461 and SMa0462 are separated by 67 nucleotides SMa0462 and SMa0464 are separated by 214 nucleotides
SMa0461: SMa0461 - TRm3 transposase, at 245,116 to 246,318
SMa0461
SMa0462: SMa0462 - hypothetical protein, at 246,386 to 248,227
SMa0462
SMa0464: SMa0464 - guanylate cyclase, at 248,442 to 251,618
SMa0464
Position (kb) 246
247
248
249 Strain fitness (log2 ratio) -2
-1
0
1 at 246.387 kb on + strand at 246.489 kb on + strand at 246.490 kb on - strand at 246.490 kb on - strand at 246.490 kb on - strand at 246.600 kb on + strand, within SMa0462 at 246.600 kb on + strand, within SMa0462 at 246.600 kb on + strand, within SMa0462 at 246.600 kb on + strand, within SMa0462 at 246.601 kb on - strand, within SMa0462 at 246.601 kb on - strand, within SMa0462 at 246.603 kb on + strand, within SMa0462 at 246.603 kb on + strand, within SMa0462 at 246.603 kb on + strand, within SMa0462 at 246.603 kb on + strand, within SMa0462 at 246.620 kb on - strand, within SMa0462 at 246.680 kb on + strand, within SMa0462 at 246.701 kb on - strand, within SMa0462 at 246.829 kb on + strand, within SMa0462 at 246.829 kb on + strand, within SMa0462 at 246.830 kb on - strand, within SMa0462 at 247.006 kb on + strand, within SMa0462 at 247.007 kb on - strand, within SMa0462 at 247.018 kb on + strand, within SMa0462 at 247.019 kb on - strand, within SMa0462 at 247.075 kb on + strand, within SMa0462 at 247.076 kb on - strand, within SMa0462 at 247.265 kb on - strand, within SMa0462 at 247.327 kb on + strand, within SMa0462 at 247.328 kb on - strand, within SMa0462 at 247.394 kb on - strand, within SMa0462 at 247.397 kb on - strand, within SMa0462 at 247.397 kb on - strand, within SMa0462 at 247.399 kb on + strand, within SMa0462 at 247.468 kb on + strand, within SMa0462 at 247.480 kb on - strand, within SMa0462 at 247.480 kb on - strand, within SMa0462 at 247.493 kb on + strand, within SMa0462 at 247.494 kb on - strand, within SMa0462 at 247.494 kb on - strand, within SMa0462 at 247.494 kb on - strand, within SMa0462 at 247.494 kb on - strand, within SMa0462 at 247.632 kb on + strand, within SMa0462 at 247.650 kb on - strand, within SMa0462 at 247.804 kb on - strand, within SMa0462 at 247.804 kb on - strand, within SMa0462 at 247.855 kb on - strand, within SMa0462 at 247.899 kb on - strand, within SMa0462 at 247.980 kb on - strand, within SMa0462 at 248.089 kb on + strand at 248.090 kb on - strand at 248.156 kb on - strand at 248.164 kb on + strand at 248.357 kb on + strand at 248.358 kb on - strand at 248.435 kb on - strand at 248.768 kb on + strand, within SMa0464 at 249.067 kb on - strand, within SMa0464 at 249.067 kb on - strand, within SMa0464 at 249.193 kb on + strand, within SMa0464 at 249.196 kb on + strand, within SMa0464
Per-strain Table
Position Strand Gene LocusTag Fraction LB no stress control remove 246,387 + -1.0 246,489 + -0.2 246,490 - -1.0 246,490 - -0.4 246,490 - +0.1 246,600 + SMa0462 0.12 -0.1 246,600 + SMa0462 0.12 +0.1 246,600 + SMa0462 0.12 +0.2 246,600 + SMa0462 0.12 +1.2 246,601 - SMa0462 0.12 -0.3 246,601 - SMa0462 0.12 +0.8 246,603 + SMa0462 0.12 -0.8 246,603 + SMa0462 0.12 +0.6 246,603 + SMa0462 0.12 -0.3 246,603 + SMa0462 0.12 -0.0 246,620 - SMa0462 0.13 -0.7 246,680 + SMa0462 0.16 -0.2 246,701 - SMa0462 0.17 +0.5 246,829 + SMa0462 0.24 -1.2 246,829 + SMa0462 0.24 -0.5 246,830 - SMa0462 0.24 +0.1 247,006 + SMa0462 0.34 -0.5 247,007 - SMa0462 0.34 -0.7 247,018 + SMa0462 0.34 +0.2 247,019 - SMa0462 0.34 -0.1 247,075 + SMa0462 0.37 -0.2 247,076 - SMa0462 0.37 -0.2 247,265 - SMa0462 0.48 +0.3 247,327 + SMa0462 0.51 -0.3 247,328 - SMa0462 0.51 -0.8 247,394 - SMa0462 0.55 -1.5 247,397 - SMa0462 0.55 -0.6 247,397 - SMa0462 0.55 -1.0 247,399 + SMa0462 0.55 +0.5 247,468 + SMa0462 0.59 -0.5 247,480 - SMa0462 0.59 +1.4 247,480 - SMa0462 0.59 -0.3 247,493 + SMa0462 0.60 +0.3 247,494 - SMa0462 0.60 +1.4 247,494 - SMa0462 0.60 -0.1 247,494 - SMa0462 0.60 -1.8 247,494 - SMa0462 0.60 -0.0 247,632 + SMa0462 0.68 -0.1 247,650 - SMa0462 0.69 -0.7 247,804 - SMa0462 0.77 -0.0 247,804 - SMa0462 0.77 -0.5 247,855 - SMa0462 0.80 -0.9 247,899 - SMa0462 0.82 -0.9 247,980 - SMa0462 0.87 -0.2 248,089 + -0.2 248,090 - +0.9 248,156 - +0.5 248,164 + +0.8 248,357 + -1.5 248,358 - +0.6 248,435 - +0.2 248,768 + SMa0464 0.10 -0.1 249,067 - SMa0464 0.20 -0.3 249,067 - SMa0464 0.20 +0.5 249,193 + SMa0464 0.24 +0.2 249,196 + SMa0464 0.24 +0.4
Or see this region's nucleotide sequence