Experiment: DMSO control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc02596 and SMc04463 are separated by 75 nucleotides SMc04463 and SMc02600 are separated by 48 nucleotides
SMc02596: SMc02596 - transcriptional regulator, at 93,287 to 94,138
SMc02596
SMc04463: SMc04463 - hypothetical protein, at 94,214 to 94,570
SMc04463
SMc02600: SMc02600 - hypothetical protein, at 94,619 to 95,767
SMc02600
Position (kb) 94
95 Strain fitness (log2 ratio) -2
-1
0
1 at 93.222 kb on + strand at 93.222 kb on + strand at 93.307 kb on + strand at 93.308 kb on - strand at 93.498 kb on + strand, within SMc02596 at 93.498 kb on + strand, within SMc02596 at 93.499 kb on - strand, within SMc02596 at 93.508 kb on - strand, within SMc02596 at 93.723 kb on - strand, within SMc02596 at 93.752 kb on - strand, within SMc02596 at 93.793 kb on + strand, within SMc02596 at 93.794 kb on - strand, within SMc02596 at 93.866 kb on + strand, within SMc02596 at 93.962 kb on + strand, within SMc02596 at 93.989 kb on + strand, within SMc02596 at 93.990 kb on - strand, within SMc02596 at 94.049 kb on + strand, within SMc02596 at 94.050 kb on - strand, within SMc02596 at 94.050 kb on - strand, within SMc02596 at 94.081 kb on + strand at 94.081 kb on + strand at 94.081 kb on + strand at 94.081 kb on + strand at 94.082 kb on - strand at 94.181 kb on + strand at 94.181 kb on + strand at 94.182 kb on - strand at 94.229 kb on - strand at 94.286 kb on + strand, within SMc04463 at 94.287 kb on - strand, within SMc04463 at 94.367 kb on + strand, within SMc04463 at 94.368 kb on - strand, within SMc04463 at 94.461 kb on + strand, within SMc04463 at 94.461 kb on + strand, within SMc04463 at 94.461 kb on + strand, within SMc04463 at 94.461 kb on + strand, within SMc04463 at 94.461 kb on + strand, within SMc04463 at 94.462 kb on - strand, within SMc04463 at 94.462 kb on - strand, within SMc04463 at 94.462 kb on - strand, within SMc04463 at 94.504 kb on - strand, within SMc04463 at 94.596 kb on + strand at 94.597 kb on - strand at 94.597 kb on - strand at 94.597 kb on - strand at 94.599 kb on - strand at 94.601 kb on + strand at 94.602 kb on - strand at 94.646 kb on + strand at 94.663 kb on + strand at 94.883 kb on - strand, within SMc02600 at 94.883 kb on - strand, within SMc02600 at 94.921 kb on + strand, within SMc02600 at 94.922 kb on - strand, within SMc02600 at 94.986 kb on - strand, within SMc02600 at 95.118 kb on - strand, within SMc02600 at 95.118 kb on - strand at 95.129 kb on + strand, within SMc02600 at 95.129 kb on + strand, within SMc02600 at 95.129 kb on + strand, within SMc02600 at 95.129 kb on + strand, within SMc02600 at 95.129 kb on + strand, within SMc02600 at 95.129 kb on + strand, within SMc02600 at 95.130 kb on - strand, within SMc02600 at 95.130 kb on - strand, within SMc02600 at 95.130 kb on - strand, within SMc02600 at 95.130 kb on - strand, within SMc02600 at 95.188 kb on + strand, within SMc02600 at 95.189 kb on - strand, within SMc02600 at 95.189 kb on - strand, within SMc02600 at 95.189 kb on - strand, within SMc02600 at 95.189 kb on - strand, within SMc02600 at 95.454 kb on + strand, within SMc02600 at 95.454 kb on + strand, within SMc02600 at 95.455 kb on - strand, within SMc02600 at 95.455 kb on - strand, within SMc02600
Per-strain Table
Position Strand Gene LocusTag Fraction DMSO control remove 93,222 + -0.1 93,222 + +1.3 93,307 + -0.3 93,308 - +0.3 93,498 + SMc02596 0.25 +0.1 93,498 + SMc02596 0.25 +0.1 93,499 - SMc02596 0.25 +0.1 93,508 - SMc02596 0.26 -0.5 93,723 - SMc02596 0.51 -0.3 93,752 - SMc02596 0.55 +0.1 93,793 + SMc02596 0.59 -0.1 93,794 - SMc02596 0.60 -0.2 93,866 + SMc02596 0.68 +0.2 93,962 + SMc02596 0.79 +0.6 93,989 + SMc02596 0.82 +0.1 93,990 - SMc02596 0.83 -0.2 94,049 + SMc02596 0.89 -0.1 94,050 - SMc02596 0.90 +0.3 94,050 - SMc02596 0.90 +0.5 94,081 + -0.5 94,081 + +0.6 94,081 + -0.4 94,081 + -0.3 94,082 - +0.6 94,181 + -0.2 94,181 + -1.4 94,182 - +0.0 94,229 - -0.0 94,286 + SMc04463 0.20 +0.3 94,287 - SMc04463 0.20 -0.1 94,367 + SMc04463 0.43 -0.9 94,368 - SMc04463 0.43 -0.3 94,461 + SMc04463 0.69 -0.3 94,461 + SMc04463 0.69 -1.0 94,461 + SMc04463 0.69 -0.9 94,461 + SMc04463 0.69 +0.3 94,461 + SMc04463 0.69 -0.1 94,462 - SMc04463 0.69 +0.1 94,462 - SMc04463 0.69 -1.3 94,462 - SMc04463 0.69 -1.4 94,504 - SMc04463 0.81 -1.6 94,596 + +0.0 94,597 - +0.6 94,597 - +0.3 94,597 - -1.3 94,599 - -1.9 94,601 + -0.3 94,602 - -2.2 94,646 + +0.3 94,663 + +0.0 94,883 - SMc02600 0.23 +0.2 94,883 - SMc02600 0.23 -0.0 94,921 + SMc02600 0.26 +0.1 94,922 - SMc02600 0.26 -0.2 94,986 - SMc02600 0.32 +0.3 95,118 - SMc02600 0.43 -0.1 95,118 - +0.6 95,129 + SMc02600 0.44 -0.0 95,129 + SMc02600 0.44 -0.2 95,129 + SMc02600 0.44 -0.6 95,129 + SMc02600 0.44 -0.9 95,129 + SMc02600 0.44 +0.1 95,129 + SMc02600 0.44 -0.8 95,130 - SMc02600 0.44 -0.3 95,130 - SMc02600 0.44 -0.1 95,130 - SMc02600 0.44 +1.1 95,130 - SMc02600 0.44 -1.2 95,188 + SMc02600 0.50 +0.3 95,189 - SMc02600 0.50 -0.3 95,189 - SMc02600 0.50 -0.3 95,189 - SMc02600 0.50 -0.6 95,189 - SMc02600 0.50 -0.2 95,454 + SMc02600 0.73 +1.6 95,454 + SMc02600 0.73 -0.9 95,455 - SMc02600 0.73 -0.1 95,455 - SMc02600 0.73 +0.4
Or see this region's nucleotide sequence