Experiment: DMSO control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa0900 and SMa0903 are separated by 145 nucleotides SMa0903 and SMa0905 are separated by 89 nucleotides SMa0905 and SMa0907 are separated by 127 nucleotides
SMa0900: SMa0900 - anti-restriction protein, at 502,545 to 503,021
SMa0900
SMa0903: SMa0903 - hypothetical protein, at 503,167 to 504,357
SMa0903
SMa0905: SMa0905 - hypothetical protein, at 504,447 to 504,848
SMa0905
SMa0907: SMa0907 - hypothetical protein, at 504,976 to 506,214
SMa0907
Position (kb) 503
504
505 Strain fitness (log2 ratio) -1
0
1
2 at 502.335 kb on - strand at 502.391 kb on - strand at 502.592 kb on + strand at 502.593 kb on - strand, within SMa0900 at 502.716 kb on + strand, within SMa0900 at 502.717 kb on - strand, within SMa0900 at 502.717 kb on - strand, within SMa0900 at 502.719 kb on - strand, within SMa0900 at 502.719 kb on - strand, within SMa0900 at 502.749 kb on + strand, within SMa0900 at 502.750 kb on - strand, within SMa0900 at 502.773 kb on + strand, within SMa0900 at 502.966 kb on - strand, within SMa0900 at 502.972 kb on - strand, within SMa0900 at 503.221 kb on - strand at 503.458 kb on + strand, within SMa0903 at 503.473 kb on - strand, within SMa0903 at 503.763 kb on + strand, within SMa0903 at 503.776 kb on - strand, within SMa0903 at 503.776 kb on - strand, within SMa0903 at 503.788 kb on + strand, within SMa0903 at 503.813 kb on + strand, within SMa0903 at 503.813 kb on + strand, within SMa0903 at 503.814 kb on - strand, within SMa0903 at 503.814 kb on - strand, within SMa0903 at 503.879 kb on - strand, within SMa0903 at 503.894 kb on - strand, within SMa0903 at 503.894 kb on - strand, within SMa0903 at 503.894 kb on - strand, within SMa0903 at 503.944 kb on + strand, within SMa0903 at 503.971 kb on - strand, within SMa0903 at 504.369 kb on + strand at 504.369 kb on + strand at 504.369 kb on + strand at 504.370 kb on - strand at 504.534 kb on - strand, within SMa0905 at 504.896 kb on + strand at 504.896 kb on + strand at 504.975 kb on - strand at 505.045 kb on + strand at 505.046 kb on - strand at 505.051 kb on - strand at 505.070 kb on + strand at 505.071 kb on - strand at 505.071 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction DMSO control remove 502,335 - +1.0 502,391 - -0.0 502,592 + +0.0 502,593 - SMa0900 0.10 +0.3 502,716 + SMa0900 0.36 -0.1 502,717 - SMa0900 0.36 -0.4 502,717 - SMa0900 0.36 +0.3 502,719 - SMa0900 0.36 +2.2 502,719 - SMa0900 0.36 +0.6 502,749 + SMa0900 0.43 -0.1 502,750 - SMa0900 0.43 -0.2 502,773 + SMa0900 0.48 +0.9 502,966 - SMa0900 0.88 +0.1 502,972 - SMa0900 0.90 +0.0 503,221 - +1.4 503,458 + SMa0903 0.24 -1.1 503,473 - SMa0903 0.26 +0.6 503,763 + SMa0903 0.50 +0.2 503,776 - SMa0903 0.51 +1.1 503,776 - SMa0903 0.51 +0.1 503,788 + SMa0903 0.52 -0.9 503,813 + SMa0903 0.54 -0.1 503,813 + SMa0903 0.54 -1.6 503,814 - SMa0903 0.54 +0.7 503,814 - SMa0903 0.54 +0.3 503,879 - SMa0903 0.60 +0.1 503,894 - SMa0903 0.61 +0.6 503,894 - SMa0903 0.61 +0.4 503,894 - SMa0903 0.61 +0.1 503,944 + SMa0903 0.65 +1.1 503,971 - SMa0903 0.68 +0.2 504,369 + +0.3 504,369 + -0.8 504,369 + -0.1 504,370 - +0.6 504,534 - SMa0905 0.22 +0.3 504,896 + -0.2 504,896 + +0.5 504,975 - -0.8 505,045 + +0.6 505,046 - -0.7 505,051 - +0.3 505,070 + +0.9 505,071 - +0.3 505,071 - -0.6
Or see this region's nucleotide sequence