Experiment: DMSO control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa0892 and SMa0894 are separated by 116 nucleotides SMa0894 and SMa0896 are separated by 166 nucleotides
SMa0892: SMa0892 - DnaE3 DNA polymerase III alpha chain, at 497,392 to 500,655
SMa0892
SMa0894: SMa0894 - hypothetical protein, at 500,772 to 501,068
SMa0894
SMa0896: SMa0896 - hypothetical protein, at 501,235 to 501,954
SMa0896
Position (kb) 500
501
502 Strain fitness (log2 ratio) -1
0
1
2 at 499.832 kb on + strand, within SMa0892 at 499.833 kb on - strand, within SMa0892 at 500.105 kb on + strand, within SMa0892 at 500.106 kb on - strand, within SMa0892 at 500.113 kb on + strand, within SMa0892 at 500.113 kb on + strand, within SMa0892 at 500.113 kb on + strand, within SMa0892 at 500.113 kb on + strand, within SMa0892 at 500.114 kb on - strand, within SMa0892 at 500.122 kb on - strand, within SMa0892 at 500.597 kb on + strand at 500.597 kb on + strand at 500.597 kb on + strand at 500.597 kb on + strand at 500.598 kb on - strand at 500.598 kb on - strand at 500.598 kb on - strand at 500.598 kb on - strand at 500.598 kb on - strand at 500.617 kb on - strand at 500.689 kb on + strand at 500.707 kb on - strand at 500.869 kb on - strand, within SMa0894 at 500.869 kb on - strand, within SMa0894 at 501.149 kb on - strand at 501.263 kb on - strand at 501.263 kb on - strand at 501.366 kb on + strand, within SMa0896 at 501.492 kb on + strand, within SMa0896 at 501.637 kb on + strand, within SMa0896 at 501.638 kb on - strand, within SMa0896 at 501.707 kb on - strand, within SMa0896 at 501.770 kb on - strand, within SMa0896 at 501.770 kb on - strand, within SMa0896 at 501.816 kb on + strand, within SMa0896 at 501.816 kb on + strand, within SMa0896 at 501.817 kb on - strand, within SMa0896 at 501.817 kb on - strand, within SMa0896 at 501.817 kb on - strand, within SMa0896 at 501.836 kb on + strand, within SMa0896 at 501.912 kb on + strand at 501.913 kb on - strand at 501.913 kb on - strand at 502.040 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction DMSO control remove 499,832 + SMa0892 0.75 +0.3 499,833 - SMa0892 0.75 +0.3 500,105 + SMa0892 0.83 -0.2 500,106 - SMa0892 0.83 +0.6 500,113 + SMa0892 0.83 +0.3 500,113 + SMa0892 0.83 +1.5 500,113 + SMa0892 0.83 -0.2 500,113 + SMa0892 0.83 +1.4 500,114 - SMa0892 0.83 +1.8 500,122 - SMa0892 0.84 -0.0 500,597 + -1.1 500,597 + -0.1 500,597 + +0.2 500,597 + -0.3 500,598 - -0.2 500,598 - -0.8 500,598 - -0.1 500,598 - -0.8 500,598 - -0.2 500,617 - -0.7 500,689 + +0.7 500,707 - +0.1 500,869 - SMa0894 0.33 -1.4 500,869 - SMa0894 0.33 -0.5 501,149 - -0.3 501,263 - -0.6 501,263 - -0.1 501,366 + SMa0896 0.18 -1.0 501,492 + SMa0896 0.36 +0.2 501,637 + SMa0896 0.56 -0.1 501,638 - SMa0896 0.56 +0.1 501,707 - SMa0896 0.66 +0.9 501,770 - SMa0896 0.74 -0.1 501,770 - SMa0896 0.74 +0.2 501,816 + SMa0896 0.81 -0.1 501,816 + SMa0896 0.81 +0.4 501,817 - SMa0896 0.81 +0.7 501,817 - SMa0896 0.81 -0.0 501,817 - SMa0896 0.81 +0.1 501,836 + SMa0896 0.83 +1.4 501,912 + -0.3 501,913 - -0.3 501,913 - +0.0 502,040 + +0.0
Or see this region's nucleotide sequence