Experiment: DMSO control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21061 and SM_b21062 are separated by 21 nucleotides SM_b21062 and SM_b21063 are separated by 58 nucleotides
SM_b21061: SM_b21061 - NDP-hexose 3-C-methyltransferase, at 694,544 to 695,791
_b21061
SM_b21062: SM_b21062 - NDP-hexose methyltransferase, at 695,813 to 697,012
_b21062
SM_b21063: SM_b21063 - nucleotide-binding protein, at 697,071 to 698,642
_b21063
Position (kb) 695
696
697
698 Strain fitness (log2 ratio) -2
-1
0
1
2 at 694.813 kb on - strand, within SM_b21061 at 694.919 kb on + strand, within SM_b21061 at 694.920 kb on - strand, within SM_b21061 at 694.920 kb on - strand, within SM_b21061 at 694.989 kb on + strand, within SM_b21061 at 695.126 kb on - strand, within SM_b21061 at 695.127 kb on + strand, within SM_b21061 at 695.127 kb on + strand, within SM_b21061 at 695.174 kb on + strand, within SM_b21061 at 695.174 kb on + strand, within SM_b21061 at 695.174 kb on + strand, within SM_b21061 at 695.175 kb on - strand, within SM_b21061 at 695.175 kb on - strand, within SM_b21061 at 695.175 kb on - strand, within SM_b21061 at 695.234 kb on + strand, within SM_b21061 at 695.235 kb on - strand, within SM_b21061 at 695.235 kb on - strand, within SM_b21061 at 695.254 kb on - strand, within SM_b21061 at 695.282 kb on + strand, within SM_b21061 at 695.282 kb on + strand, within SM_b21061 at 695.333 kb on + strand, within SM_b21061 at 695.334 kb on - strand, within SM_b21061 at 695.334 kb on - strand, within SM_b21061 at 695.407 kb on + strand, within SM_b21061 at 695.408 kb on - strand, within SM_b21061 at 695.408 kb on - strand, within SM_b21061 at 695.418 kb on - strand, within SM_b21061 at 695.575 kb on - strand, within SM_b21061 at 695.615 kb on + strand, within SM_b21061 at 695.615 kb on + strand, within SM_b21061 at 695.615 kb on + strand, within SM_b21061 at 695.616 kb on - strand, within SM_b21061 at 695.616 kb on - strand, within SM_b21061 at 695.616 kb on - strand, within SM_b21061 at 695.616 kb on - strand, within SM_b21061 at 695.617 kb on + strand, within SM_b21061 at 695.617 kb on + strand, within SM_b21061 at 695.617 kb on + strand, within SM_b21061 at 695.617 kb on + strand, within SM_b21061 at 695.617 kb on + strand, within SM_b21061 at 695.618 kb on - strand, within SM_b21061 at 695.678 kb on + strand at 695.679 kb on - strand at 695.796 kb on - strand at 695.895 kb on + strand at 695.923 kb on - strand at 695.968 kb on + strand, within SM_b21062 at 696.069 kb on - strand, within SM_b21062 at 696.139 kb on + strand, within SM_b21062 at 696.139 kb on + strand, within SM_b21062 at 696.140 kb on - strand, within SM_b21062 at 696.143 kb on + strand, within SM_b21062 at 696.143 kb on + strand, within SM_b21062 at 696.143 kb on + strand, within SM_b21062 at 696.143 kb on + strand, within SM_b21062 at 696.143 kb on + strand, within SM_b21062 at 696.143 kb on + strand, within SM_b21062 at 696.143 kb on + strand, within SM_b21062 at 696.143 kb on + strand, within SM_b21062 at 696.144 kb on - strand, within SM_b21062 at 696.144 kb on - strand, within SM_b21062 at 696.144 kb on - strand, within SM_b21062 at 696.144 kb on - strand, within SM_b21062 at 696.144 kb on - strand, within SM_b21062 at 696.144 kb on - strand, within SM_b21062 at 696.144 kb on - strand, within SM_b21062 at 696.361 kb on - strand, within SM_b21062 at 696.433 kb on - strand, within SM_b21062 at 696.437 kb on + strand, within SM_b21062 at 696.437 kb on + strand, within SM_b21062 at 696.461 kb on + strand, within SM_b21062 at 696.461 kb on + strand, within SM_b21062 at 696.497 kb on + strand, within SM_b21062 at 696.513 kb on - strand, within SM_b21062 at 696.596 kb on + strand, within SM_b21062 at 696.597 kb on - strand, within SM_b21062 at 696.845 kb on + strand, within SM_b21062 at 696.846 kb on - strand, within SM_b21062 at 696.948 kb on - strand at 696.948 kb on - strand at 697.171 kb on + strand at 697.172 kb on - strand at 697.172 kb on - strand at 697.188 kb on - strand at 697.188 kb on - strand at 697.199 kb on + strand at 697.232 kb on + strand, within SM_b21063 at 697.300 kb on - strand, within SM_b21063 at 697.420 kb on + strand, within SM_b21063 at 697.529 kb on + strand, within SM_b21063 at 697.534 kb on - strand, within SM_b21063 at 697.534 kb on - strand, within SM_b21063 at 697.534 kb on - strand, within SM_b21063 at 697.554 kb on + strand, within SM_b21063 at 697.578 kb on - strand, within SM_b21063 at 697.719 kb on + strand, within SM_b21063 at 697.720 kb on - strand, within SM_b21063 at 697.722 kb on + strand, within SM_b21063 at 697.722 kb on + strand, within SM_b21063 at 697.755 kb on + strand, within SM_b21063 at 697.755 kb on + strand, within SM_b21063 at 697.756 kb on - strand, within SM_b21063 at 697.758 kb on + strand, within SM_b21063 at 697.851 kb on + strand, within SM_b21063 at 697.873 kb on + strand, within SM_b21063 at 697.918 kb on + strand, within SM_b21063 at 697.918 kb on + strand, within SM_b21063 at 697.919 kb on - strand, within SM_b21063 at 697.919 kb on - strand, within SM_b21063
Per-strain Table
Position Strand Gene LocusTag Fraction DMSO control remove 694,813 - SM_b21061 0.22 -0.1 694,919 + SM_b21061 0.30 -0.1 694,920 - SM_b21061 0.30 +0.9 694,920 - SM_b21061 0.30 -1.5 694,989 + SM_b21061 0.36 -0.5 695,126 - SM_b21061 0.47 +0.2 695,127 + SM_b21061 0.47 +1.9 695,127 + SM_b21061 0.47 -0.2 695,174 + SM_b21061 0.50 +1.3 695,174 + SM_b21061 0.50 +1.9 695,174 + SM_b21061 0.50 -0.9 695,175 - SM_b21061 0.51 -0.1 695,175 - SM_b21061 0.51 -0.2 695,175 - SM_b21061 0.51 +0.7 695,234 + SM_b21061 0.55 +0.3 695,235 - SM_b21061 0.55 -0.0 695,235 - SM_b21061 0.55 +0.4 695,254 - SM_b21061 0.57 +0.8 695,282 + SM_b21061 0.59 +0.4 695,282 + SM_b21061 0.59 +0.1 695,333 + SM_b21061 0.63 -0.2 695,334 - SM_b21061 0.63 -0.5 695,334 - SM_b21061 0.63 +0.1 695,407 + SM_b21061 0.69 +1.9 695,408 - SM_b21061 0.69 -0.3 695,408 - SM_b21061 0.69 +0.0 695,418 - SM_b21061 0.70 +0.7 695,575 - SM_b21061 0.83 -0.0 695,615 + SM_b21061 0.86 +0.9 695,615 + SM_b21061 0.86 +0.3 695,615 + SM_b21061 0.86 -0.5 695,616 - SM_b21061 0.86 +0.3 695,616 - SM_b21061 0.86 +0.7 695,616 - SM_b21061 0.86 -0.4 695,616 - SM_b21061 0.86 +1.2 695,617 + SM_b21061 0.86 -0.7 695,617 + SM_b21061 0.86 -1.2 695,617 + SM_b21061 0.86 -0.3 695,617 + SM_b21061 0.86 +0.9 695,617 + SM_b21061 0.86 -0.1 695,618 - SM_b21061 0.86 +0.6 695,678 + +0.1 695,679 - -0.2 695,796 - -0.6 695,895 + +0.3 695,923 - -0.7 695,968 + SM_b21062 0.13 +0.0 696,069 - SM_b21062 0.21 -0.7 696,139 + SM_b21062 0.27 -0.2 696,139 + SM_b21062 0.27 -0.9 696,140 - SM_b21062 0.27 +0.4 696,143 + SM_b21062 0.28 +0.8 696,143 + SM_b21062 0.28 -1.9 696,143 + SM_b21062 0.28 -0.0 696,143 + SM_b21062 0.28 +0.5 696,143 + SM_b21062 0.28 +1.1 696,143 + SM_b21062 0.28 +1.7 696,143 + SM_b21062 0.28 +0.7 696,143 + SM_b21062 0.28 -0.3 696,144 - SM_b21062 0.28 +0.8 696,144 - SM_b21062 0.28 +0.3 696,144 - SM_b21062 0.28 +0.1 696,144 - SM_b21062 0.28 +0.2 696,144 - SM_b21062 0.28 +0.2 696,144 - SM_b21062 0.28 +0.3 696,144 - SM_b21062 0.28 -0.3 696,361 - SM_b21062 0.46 +0.8 696,433 - SM_b21062 0.52 -0.2 696,437 + SM_b21062 0.52 +1.3 696,437 + SM_b21062 0.52 -0.1 696,461 + SM_b21062 0.54 +0.9 696,461 + SM_b21062 0.54 -1.2 696,497 + SM_b21062 0.57 +0.4 696,513 - SM_b21062 0.58 +0.1 696,596 + SM_b21062 0.65 +0.1 696,597 - SM_b21062 0.65 -0.3 696,845 + SM_b21062 0.86 +0.3 696,846 - SM_b21062 0.86 +0.2 696,948 - -0.0 696,948 - +0.5 697,171 + -0.4 697,172 - +0.5 697,172 - -1.4 697,188 - -0.2 697,188 - -0.5 697,199 + +0.0 697,232 + SM_b21063 0.10 -0.2 697,300 - SM_b21063 0.15 +0.7 697,420 + SM_b21063 0.22 +0.3 697,529 + SM_b21063 0.29 -0.5 697,534 - SM_b21063 0.29 +0.7 697,534 - SM_b21063 0.29 -0.9 697,534 - SM_b21063 0.29 -1.1 697,554 + SM_b21063 0.31 +0.0 697,578 - SM_b21063 0.32 -0.0 697,719 + SM_b21063 0.41 -0.3 697,720 - SM_b21063 0.41 -0.5 697,722 + SM_b21063 0.41 -0.1 697,722 + SM_b21063 0.41 -0.3 697,755 + SM_b21063 0.44 +0.7 697,755 + SM_b21063 0.44 +0.1 697,756 - SM_b21063 0.44 -0.9 697,758 + SM_b21063 0.44 +0.3 697,851 + SM_b21063 0.50 -1.2 697,873 + SM_b21063 0.51 +0.2 697,918 + SM_b21063 0.54 -0.1 697,918 + SM_b21063 0.54 -0.3 697,919 - SM_b21063 0.54 -1.3 697,919 - SM_b21063 0.54 +0.7
Or see this region's nucleotide sequence