Experiment: DMSO control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21023 and SM_b21024 are separated by 168 nucleotides SM_b21024 and SM_b21025 are separated by 11 nucleotides SM_b21025 and SM_b21026 are separated by 143 nucleotides SM_b21026 and SM_b21027 are separated by 696 nucleotides
SM_b21023: SM_b21023 - hypothetical protein, at 646,729 to 647,043
_b21023
SM_b21024: SM_b21024 - hypothetical protein, at 647,212 to 647,379
_b21024
SM_b21025: SM_b21025 - hypothetical protein, at 647,391 to 647,810
_b21025
SM_b21026: SM_b21026 - exopeptide, at 647,954 to 648,091
_b21026
SM_b21027: SM_b21027 - hypothetical protein, at 648,788 to 649,504
_b21027
Position (kb) 647
648
649 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 646.998 kb on - strand, within SM_b21023 at 646.999 kb on + strand, within SM_b21023 at 646.999 kb on + strand, within SM_b21023 at 646.999 kb on + strand, within SM_b21023 at 647.000 kb on - strand, within SM_b21023 at 647.000 kb on - strand, within SM_b21023 at 647.001 kb on + strand, within SM_b21023 at 647.002 kb on - strand, within SM_b21023 at 647.042 kb on - strand at 647.055 kb on + strand at 647.194 kb on - strand at 647.194 kb on - strand at 647.288 kb on + strand, within SM_b21024 at 647.289 kb on - strand, within SM_b21024 at 647.289 kb on - strand, within SM_b21024 at 647.443 kb on - strand, within SM_b21025 at 647.578 kb on + strand, within SM_b21025 at 647.579 kb on - strand, within SM_b21025 at 647.580 kb on + strand, within SM_b21025 at 647.580 kb on + strand, within SM_b21025 at 647.580 kb on + strand, within SM_b21025 at 647.580 kb on + strand, within SM_b21025 at 647.581 kb on - strand, within SM_b21025 at 647.581 kb on - strand, within SM_b21025 at 647.581 kb on - strand, within SM_b21025 at 647.706 kb on - strand, within SM_b21025 at 647.752 kb on - strand, within SM_b21025 at 647.820 kb on - strand at 647.934 kb on + strand at 647.935 kb on - strand at 647.935 kb on - strand at 647.935 kb on - strand at 647.960 kb on + strand at 647.961 kb on - strand at 648.062 kb on + strand, within SM_b21026 at 648.062 kb on + strand, within SM_b21026 at 648.062 kb on + strand, within SM_b21026 at 648.063 kb on - strand, within SM_b21026 at 648.096 kb on + strand at 648.097 kb on - strand at 648.097 kb on - strand at 648.097 kb on - strand at 648.099 kb on + strand at 648.100 kb on - strand at 648.135 kb on + strand at 648.135 kb on + strand at 648.136 kb on - strand at 648.214 kb on + strand at 648.223 kb on + strand at 648.223 kb on + strand at 648.224 kb on - strand at 648.285 kb on - strand at 648.296 kb on + strand at 648.297 kb on - strand at 648.297 kb on - strand at 648.539 kb on + strand at 648.539 kb on + strand at 648.540 kb on - strand at 648.593 kb on - strand at 648.593 kb on - strand at 648.594 kb on + strand at 648.594 kb on + strand at 648.595 kb on - strand at 648.635 kb on - strand at 648.699 kb on + strand at 648.731 kb on + strand at 648.756 kb on + strand at 648.773 kb on + strand at 648.796 kb on + strand at 648.796 kb on + strand at 648.861 kb on + strand, within SM_b21027 at 648.861 kb on + strand, within SM_b21027 at 648.861 kb on + strand, within SM_b21027 at 648.861 kb on + strand, within SM_b21027 at 648.862 kb on - strand, within SM_b21027 at 648.862 kb on - strand, within SM_b21027 at 648.877 kb on - strand, within SM_b21027 at 648.879 kb on - strand, within SM_b21027 at 648.879 kb on - strand, within SM_b21027
Per-strain Table
Position Strand Gene LocusTag Fraction DMSO control remove 646,998 - SM_b21023 0.85 +0.0 646,999 + SM_b21023 0.86 +0.3 646,999 + SM_b21023 0.86 -0.3 646,999 + SM_b21023 0.86 -0.0 647,000 - SM_b21023 0.86 +0.2 647,000 - SM_b21023 0.86 +0.4 647,001 + SM_b21023 0.86 -0.7 647,002 - SM_b21023 0.87 -0.0 647,042 - -0.6 647,055 + +0.2 647,194 - +0.3 647,194 - -0.5 647,288 + SM_b21024 0.45 -0.8 647,289 - SM_b21024 0.46 -0.2 647,289 - SM_b21024 0.46 -0.1 647,443 - SM_b21025 0.12 -0.6 647,578 + SM_b21025 0.45 -0.4 647,579 - SM_b21025 0.45 +0.6 647,580 + SM_b21025 0.45 +0.6 647,580 + SM_b21025 0.45 -0.5 647,580 + SM_b21025 0.45 -1.0 647,580 + SM_b21025 0.45 -0.1 647,581 - SM_b21025 0.45 +0.0 647,581 - SM_b21025 0.45 -1.0 647,581 - SM_b21025 0.45 -0.2 647,706 - SM_b21025 0.75 +0.2 647,752 - SM_b21025 0.86 -0.1 647,820 - -0.4 647,934 + +0.0 647,935 - +0.0 647,935 - +0.3 647,935 - +0.3 647,960 + -0.0 647,961 - +1.5 648,062 + SM_b21026 0.78 +0.3 648,062 + SM_b21026 0.78 -1.4 648,062 + SM_b21026 0.78 -0.3 648,063 - SM_b21026 0.79 -0.4 648,096 + +2.9 648,097 - +0.4 648,097 - -0.1 648,097 - +0.5 648,099 + -0.6 648,100 - -0.2 648,135 + +0.1 648,135 + +0.3 648,136 - +1.0 648,214 + +0.1 648,223 + +0.4 648,223 + -0.6 648,224 - -0.4 648,285 - -1.1 648,296 + +0.2 648,297 - -0.4 648,297 - -2.1 648,539 + -0.3 648,539 + -0.4 648,540 - -1.3 648,593 - +1.0 648,593 - +1.3 648,594 + +0.5 648,594 + +0.3 648,595 - -0.7 648,635 - +1.9 648,699 + -1.0 648,731 + +0.7 648,756 + +0.5 648,773 + +0.5 648,796 + +0.2 648,796 + -0.9 648,861 + SM_b21027 0.10 -0.4 648,861 + SM_b21027 0.10 -0.1 648,861 + SM_b21027 0.10 +0.2 648,861 + SM_b21027 0.10 +0.2 648,862 - SM_b21027 0.10 -0.1 648,862 - SM_b21027 0.10 -0.5 648,877 - SM_b21027 0.12 -0.2 648,879 - SM_b21027 0.13 -0.4 648,879 - SM_b21027 0.13 -1.0
Or see this region's nucleotide sequence