Experiment: DMSO control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20502 and SM_b20503 are separated by 19 nucleotides SM_b20503 and SM_b20504 are separated by 65 nucleotides
SM_b20502: SM_b20502 - sugar ABC transporter permease, at 523,185 to 524,177
_b20502
SM_b20503: SM_b20503 - sugar ABC transporter ATP-binding protein, at 524,197 to 525,735
_b20503
SM_b20504: SM_b20504 - sugar ABC transporter substrate-binding protein, at 525,801 to 526,802
_b20504
Position (kb) 524
525
526 Strain fitness (log2 ratio) -2
-1
0
1
2 at 523.239 kb on + strand at 523.239 kb on + strand at 523.240 kb on - strand at 523.256 kb on + strand at 523.257 kb on - strand at 523.257 kb on - strand at 523.268 kb on - strand at 523.453 kb on + strand, within SM_b20502 at 523.453 kb on + strand, within SM_b20502 at 523.453 kb on + strand, within SM_b20502 at 523.453 kb on + strand, within SM_b20502 at 523.453 kb on + strand, within SM_b20502 at 523.453 kb on + strand, within SM_b20502 at 523.453 kb on + strand, within SM_b20502 at 523.454 kb on - strand, within SM_b20502 at 523.454 kb on - strand, within SM_b20502 at 523.454 kb on - strand, within SM_b20502 at 523.454 kb on - strand, within SM_b20502 at 523.454 kb on - strand, within SM_b20502 at 523.565 kb on - strand, within SM_b20502 at 523.645 kb on + strand, within SM_b20502 at 523.646 kb on - strand, within SM_b20502 at 523.665 kb on - strand, within SM_b20502 at 523.775 kb on + strand, within SM_b20502 at 523.775 kb on + strand, within SM_b20502 at 523.775 kb on + strand, within SM_b20502 at 523.776 kb on - strand, within SM_b20502 at 524.165 kb on + strand at 524.166 kb on - strand at 524.177 kb on + strand at 524.177 kb on + strand at 524.557 kb on - strand, within SM_b20503 at 524.733 kb on - strand, within SM_b20503 at 524.763 kb on - strand, within SM_b20503 at 524.965 kb on + strand, within SM_b20503 at 525.077 kb on + strand, within SM_b20503 at 525.078 kb on - strand, within SM_b20503 at 525.078 kb on - strand, within SM_b20503 at 525.078 kb on - strand, within SM_b20503 at 525.142 kb on - strand, within SM_b20503 at 525.142 kb on - strand, within SM_b20503 at 525.144 kb on + strand, within SM_b20503 at 525.144 kb on + strand, within SM_b20503 at 525.145 kb on - strand, within SM_b20503 at 525.146 kb on + strand, within SM_b20503 at 525.146 kb on + strand, within SM_b20503 at 525.146 kb on + strand, within SM_b20503 at 525.146 kb on + strand, within SM_b20503 at 525.146 kb on + strand, within SM_b20503 at 525.146 kb on + strand, within SM_b20503 at 525.146 kb on + strand, within SM_b20503 at 525.147 kb on - strand, within SM_b20503 at 525.147 kb on - strand, within SM_b20503 at 525.147 kb on - strand, within SM_b20503 at 525.147 kb on - strand, within SM_b20503 at 525.147 kb on - strand, within SM_b20503 at 525.386 kb on + strand, within SM_b20503 at 525.387 kb on - strand, within SM_b20503 at 525.661 kb on + strand at 525.661 kb on + strand at 525.803 kb on - strand at 525.822 kb on - strand at 525.838 kb on + strand at 525.999 kb on - strand, within SM_b20504 at 525.999 kb on - strand, within SM_b20504 at 526.000 kb on + strand, within SM_b20504 at 526.000 kb on + strand, within SM_b20504 at 526.001 kb on - strand, within SM_b20504 at 526.065 kb on + strand, within SM_b20504 at 526.068 kb on - strand, within SM_b20504 at 526.068 kb on - strand, within SM_b20504 at 526.068 kb on - strand, within SM_b20504 at 526.213 kb on + strand, within SM_b20504 at 526.213 kb on + strand, within SM_b20504 at 526.213 kb on + strand, within SM_b20504 at 526.214 kb on - strand, within SM_b20504 at 526.214 kb on - strand, within SM_b20504 at 526.349 kb on - strand, within SM_b20504 at 526.393 kb on + strand, within SM_b20504 at 526.393 kb on + strand, within SM_b20504 at 526.393 kb on + strand, within SM_b20504 at 526.393 kb on + strand, within SM_b20504 at 526.393 kb on + strand, within SM_b20504 at 526.393 kb on + strand, within SM_b20504 at 526.393 kb on + strand, within SM_b20504 at 526.393 kb on + strand, within SM_b20504 at 526.394 kb on - strand, within SM_b20504 at 526.394 kb on - strand, within SM_b20504 at 526.394 kb on - strand, within SM_b20504 at 526.394 kb on - strand, within SM_b20504 at 526.394 kb on - strand, within SM_b20504 at 526.397 kb on + strand, within SM_b20504 at 526.397 kb on + strand, within SM_b20504 at 526.426 kb on + strand, within SM_b20504 at 526.427 kb on - strand, within SM_b20504 at 526.432 kb on - strand, within SM_b20504 at 526.603 kb on + strand, within SM_b20504 at 526.622 kb on - strand, within SM_b20504 at 526.622 kb on - strand, within SM_b20504 at 526.685 kb on - strand, within SM_b20504 at 526.718 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction DMSO control remove 523,239 + +0.1 523,239 + -0.9 523,240 - +0.0 523,256 + +0.4 523,257 - -0.3 523,257 - +0.3 523,268 - +0.2 523,453 + SM_b20502 0.27 -0.3 523,453 + SM_b20502 0.27 +1.0 523,453 + SM_b20502 0.27 -0.0 523,453 + SM_b20502 0.27 +0.8 523,453 + SM_b20502 0.27 +0.3 523,453 + SM_b20502 0.27 -0.3 523,453 + SM_b20502 0.27 +0.4 523,454 - SM_b20502 0.27 +0.1 523,454 - SM_b20502 0.27 -0.3 523,454 - SM_b20502 0.27 +0.2 523,454 - SM_b20502 0.27 -0.3 523,454 - SM_b20502 0.27 -0.0 523,565 - SM_b20502 0.38 +0.4 523,645 + SM_b20502 0.46 +0.0 523,646 - SM_b20502 0.46 -1.3 523,665 - SM_b20502 0.48 +0.1 523,775 + SM_b20502 0.59 +0.6 523,775 + SM_b20502 0.59 +0.7 523,775 + SM_b20502 0.59 -0.4 523,776 - SM_b20502 0.60 +0.1 524,165 + +0.5 524,166 - -0.2 524,177 + +1.3 524,177 + -0.6 524,557 - SM_b20503 0.23 +0.1 524,733 - SM_b20503 0.35 +0.3 524,763 - SM_b20503 0.37 -1.8 524,965 + SM_b20503 0.50 +0.1 525,077 + SM_b20503 0.57 -0.6 525,078 - SM_b20503 0.57 -0.9 525,078 - SM_b20503 0.57 -0.2 525,078 - SM_b20503 0.57 -0.7 525,142 - SM_b20503 0.61 -0.4 525,142 - SM_b20503 0.61 -1.2 525,144 + SM_b20503 0.62 +0.9 525,144 + SM_b20503 0.62 -2.0 525,145 - SM_b20503 0.62 -0.7 525,146 + SM_b20503 0.62 +1.6 525,146 + SM_b20503 0.62 +0.1 525,146 + SM_b20503 0.62 +0.3 525,146 + SM_b20503 0.62 +0.3 525,146 + SM_b20503 0.62 -0.7 525,146 + SM_b20503 0.62 -0.4 525,146 + SM_b20503 0.62 +0.4 525,147 - SM_b20503 0.62 +0.4 525,147 - SM_b20503 0.62 +0.3 525,147 - SM_b20503 0.62 -0.3 525,147 - SM_b20503 0.62 +0.0 525,147 - SM_b20503 0.62 -0.9 525,386 + SM_b20503 0.77 -0.3 525,387 - SM_b20503 0.77 -0.8 525,661 + -0.2 525,661 + +0.6 525,803 - +0.3 525,822 - -0.2 525,838 + +2.5 525,999 - SM_b20504 0.20 +0.0 525,999 - SM_b20504 0.20 +1.9 526,000 + SM_b20504 0.20 -1.5 526,000 + SM_b20504 0.20 -0.3 526,001 - SM_b20504 0.20 +0.4 526,065 + SM_b20504 0.26 -0.2 526,068 - SM_b20504 0.27 -0.6 526,068 - SM_b20504 0.27 -0.2 526,068 - SM_b20504 0.27 -0.1 526,213 + SM_b20504 0.41 -0.2 526,213 + SM_b20504 0.41 -0.1 526,213 + SM_b20504 0.41 +0.1 526,214 - SM_b20504 0.41 -1.0 526,214 - SM_b20504 0.41 -0.6 526,349 - SM_b20504 0.55 +0.9 526,393 + SM_b20504 0.59 +1.1 526,393 + SM_b20504 0.59 +0.0 526,393 + SM_b20504 0.59 -0.7 526,393 + SM_b20504 0.59 -0.3 526,393 + SM_b20504 0.59 +0.1 526,393 + SM_b20504 0.59 -0.5 526,393 + SM_b20504 0.59 +0.2 526,393 + SM_b20504 0.59 +1.0 526,394 - SM_b20504 0.59 -0.1 526,394 - SM_b20504 0.59 +1.1 526,394 - SM_b20504 0.59 -0.3 526,394 - SM_b20504 0.59 +0.7 526,394 - SM_b20504 0.59 -1.4 526,397 + SM_b20504 0.59 +0.3 526,397 + SM_b20504 0.59 +0.3 526,426 + SM_b20504 0.62 -0.8 526,427 - SM_b20504 0.62 +0.2 526,432 - SM_b20504 0.63 -0.6 526,603 + SM_b20504 0.80 +1.3 526,622 - SM_b20504 0.82 +0.6 526,622 - SM_b20504 0.82 +0.5 526,685 - SM_b20504 0.88 -0.9 526,718 - -0.2
Or see this region's nucleotide sequence