Experiment: DMSO control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21078 and SM_b21079 are separated by 428 nucleotides SM_b21079 and SM_b21080 are separated by 300 nucleotides
SM_b21078: SM_b21078 - glycosyltransferase, at 714,876 to 716,084
_b21078
SM_b21079: SM_b21079 - transcriptional regulator, at 716,513 to 717,244
_b21079
SM_b21080: SM_b21080 - response regulator protein, at 717,545 to 718,369
_b21080
Position (kb) 716
717
718 Strain fitness (log2 ratio) -1
0
1
2 at 715.599 kb on + strand, within SM_b21078 at 715.599 kb on + strand, within SM_b21078 at 715.665 kb on - strand, within SM_b21078 at 715.912 kb on - strand, within SM_b21078 at 715.965 kb on - strand at 715.978 kb on + strand at 715.978 kb on + strand at 715.979 kb on - strand at 715.979 kb on - strand at 715.979 kb on - strand at 715.979 kb on - strand at 716.049 kb on + strand at 716.077 kb on + strand at 716.077 kb on + strand at 716.077 kb on + strand at 716.077 kb on + strand at 716.077 kb on + strand at 716.077 kb on + strand at 716.078 kb on - strand at 716.078 kb on - strand at 716.082 kb on + strand at 716.236 kb on - strand at 716.336 kb on + strand at 716.337 kb on - strand at 716.337 kb on - strand at 716.337 kb on - strand at 716.337 kb on - strand at 716.438 kb on - strand at 716.477 kb on + strand at 716.478 kb on - strand at 716.480 kb on + strand at 716.481 kb on - strand at 716.582 kb on - strand at 716.587 kb on + strand, within SM_b21079 at 716.588 kb on - strand, within SM_b21079 at 716.588 kb on - strand, within SM_b21079 at 716.588 kb on - strand, within SM_b21079 at 716.588 kb on - strand, within SM_b21079 at 716.627 kb on + strand, within SM_b21079 at 716.648 kb on - strand, within SM_b21079 at 716.769 kb on + strand, within SM_b21079 at 716.769 kb on + strand, within SM_b21079 at 716.769 kb on + strand, within SM_b21079 at 716.832 kb on + strand, within SM_b21079 at 716.832 kb on + strand, within SM_b21079 at 717.012 kb on + strand, within SM_b21079 at 717.013 kb on - strand, within SM_b21079 at 717.013 kb on - strand, within SM_b21079 at 717.065 kb on + strand, within SM_b21079 at 717.065 kb on + strand, within SM_b21079 at 717.066 kb on - strand, within SM_b21079 at 717.140 kb on + strand at 717.369 kb on - strand at 717.369 kb on - strand at 717.543 kb on + strand at 717.562 kb on + strand at 717.613 kb on + strand at 717.614 kb on - strand at 717.643 kb on + strand at 717.643 kb on + strand, within SM_b21080 at 717.643 kb on + strand, within SM_b21080 at 717.646 kb on + strand, within SM_b21080 at 717.646 kb on + strand, within SM_b21080 at 717.658 kb on + strand, within SM_b21080 at 717.658 kb on + strand, within SM_b21080 at 717.659 kb on - strand, within SM_b21080 at 717.748 kb on + strand, within SM_b21080 at 717.765 kb on + strand, within SM_b21080 at 717.766 kb on - strand, within SM_b21080 at 717.986 kb on + strand, within SM_b21080 at 717.986 kb on + strand, within SM_b21080 at 717.986 kb on + strand, within SM_b21080 at 717.987 kb on - strand, within SM_b21080 at 717.987 kb on - strand, within SM_b21080 at 717.987 kb on - strand, within SM_b21080 at 717.987 kb on - strand, within SM_b21080 at 717.988 kb on + strand, within SM_b21080 at 717.988 kb on + strand, within SM_b21080 at 717.988 kb on + strand, within SM_b21080 at 717.989 kb on - strand, within SM_b21080 at 718.053 kb on + strand, within SM_b21080 at 718.053 kb on + strand, within SM_b21080 at 718.123 kb on + strand, within SM_b21080 at 718.124 kb on - strand, within SM_b21080 at 718.203 kb on - strand, within SM_b21080 at 718.231 kb on - strand, within SM_b21080
Per-strain Table
Position Strand Gene LocusTag Fraction DMSO control remove 715,599 + SM_b21078 0.60 +0.1 715,599 + SM_b21078 0.60 -0.3 715,665 - SM_b21078 0.65 +0.1 715,912 - SM_b21078 0.86 +1.3 715,965 - +0.3 715,978 + +1.8 715,978 + +0.4 715,979 - -0.1 715,979 - -0.1 715,979 - -0.1 715,979 - -0.0 716,049 + +0.8 716,077 + +0.3 716,077 + -1.5 716,077 + -0.4 716,077 + +1.1 716,077 + -0.1 716,077 + -0.4 716,078 - -1.0 716,078 - +0.8 716,082 + -0.2 716,236 - -0.6 716,336 + +1.3 716,337 - -0.5 716,337 - -0.2 716,337 - -1.0 716,337 - +1.8 716,438 - +0.6 716,477 + +0.5 716,478 - -0.1 716,480 + -0.5 716,481 - -1.4 716,582 - -0.1 716,587 + SM_b21079 0.10 -0.4 716,588 - SM_b21079 0.10 +1.8 716,588 - SM_b21079 0.10 -0.1 716,588 - SM_b21079 0.10 -0.1 716,588 - SM_b21079 0.10 -0.2 716,627 + SM_b21079 0.16 +1.2 716,648 - SM_b21079 0.18 -0.8 716,769 + SM_b21079 0.35 -0.2 716,769 + SM_b21079 0.35 -1.7 716,769 + SM_b21079 0.35 -0.5 716,832 + SM_b21079 0.44 -0.2 716,832 + SM_b21079 0.44 -0.2 717,012 + SM_b21079 0.68 +1.3 717,013 - SM_b21079 0.68 +0.8 717,013 - SM_b21079 0.68 -0.8 717,065 + SM_b21079 0.75 +1.8 717,065 + SM_b21079 0.75 -1.1 717,066 - SM_b21079 0.76 -0.1 717,140 + +0.8 717,369 - -0.5 717,369 - +0.4 717,543 + -0.5 717,562 + +1.2 717,613 + -0.5 717,614 - -0.8 717,643 + +0.8 717,643 + SM_b21080 0.12 +0.6 717,643 + SM_b21080 0.12 -1.5 717,646 + SM_b21080 0.12 -0.2 717,646 + SM_b21080 0.12 -0.2 717,658 + SM_b21080 0.14 +0.1 717,658 + SM_b21080 0.14 -0.1 717,659 - SM_b21080 0.14 +1.8 717,748 + SM_b21080 0.25 +0.0 717,765 + SM_b21080 0.27 -0.1 717,766 - SM_b21080 0.27 +0.0 717,986 + SM_b21080 0.53 +1.5 717,986 + SM_b21080 0.53 -0.0 717,986 + SM_b21080 0.53 -0.2 717,987 - SM_b21080 0.54 +1.8 717,987 - SM_b21080 0.54 +1.0 717,987 - SM_b21080 0.54 +1.1 717,987 - SM_b21080 0.54 -1.1 717,988 + SM_b21080 0.54 +0.5 717,988 + SM_b21080 0.54 +0.1 717,988 + SM_b21080 0.54 -0.3 717,989 - SM_b21080 0.54 -0.5 718,053 + SM_b21080 0.62 -0.1 718,053 + SM_b21080 0.62 +0.0 718,123 + SM_b21080 0.70 +0.3 718,124 - SM_b21080 0.70 -0.4 718,203 - SM_b21080 0.80 +0.2 718,231 - SM_b21080 0.83 +0.5
Or see this region's nucleotide sequence