Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS29780

Experiment: Glucose (C) and nitrate (N); with TAPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and nitrate (N); with TAPS
6,618,959	-		PFLU_RS29775	0.54	+1.5
6,618,969	+		PFLU_RS29775	0.55	-0.2
6,618,991	+		PFLU_RS29775	0.56	-1.3
6,618,991	+		PFLU_RS29775	0.56	+1.8
6,618,992	-		PFLU_RS29775	0.57	+0.8
6,618,992	-		PFLU_RS29775	0.57	+0.5
6,618,992	-		PFLU_RS29775	0.57	+1.1
6,618,993	+		PFLU_RS29775	0.57	-1.1
6,618,993	+		PFLU_RS29775	0.57	+0.9
6,618,993	+		PFLU_RS29775	0.57	-0.5
6,618,993	+		PFLU_RS29775	0.57	+0.1
6,618,993	+		PFLU_RS29775	0.57	-0.5
6,618,993	+		PFLU_RS29775	0.57	+1.6
6,618,993	+		PFLU_RS29775	0.57	+0.7
6,618,993	+		PFLU_RS29775	0.57	+1.6
6,618,993	+		PFLU_RS29775	0.57	+0.5
6,618,994	-		PFLU_RS29775	0.57	-0.4
6,618,994	-		PFLU_RS29775	0.57	+0.1
6,618,994	-		PFLU_RS29775	0.57	+0.8
6,618,994	-		PFLU_RS29775	0.57	+1.0
6,618,994	-		PFLU_RS29775	0.57	-1.8
6,619,094	+		PFLU_RS29775	0.64	+2.9
6,619,095	-		PFLU_RS29775	0.64	+0.1
6,619,206	+		PFLU_RS29775	0.73	+1.3
6,619,206	+		PFLU_RS29775	0.73	+2.1
6,619,206	+		PFLU_RS29775	0.73	-2.7
6,619,206	+		PFLU_RS29775	0.73	+0.1
6,619,206	+		PFLU_RS29775	0.73	-0.9
6,619,207	-		PFLU_RS29775	0.73	-3.3
6,619,207	-		PFLU_RS29775	0.73	+0.2
6,619,449	+				+0.7
6,619,450	-				+0.1
6,619,450	-				-2.2
6,619,494	+				-0.4
6,619,495	-				+1.8
6,619,567	+				-0.9
6,619,567	+				-1.1
6,619,567	+				+0.6
6,619,567	+				+0.9
6,619,567	+				+0.1
6,619,567	+				-0.6
6,619,567	+				-0.1
6,619,567	+				-0.5
6,619,567	+				-2.9
6,619,567	+				+1.4
6,619,567	+				+0.6
6,619,567	+				-0.1
6,619,567	+				+1.1
6,619,567	+				+0.5
6,619,567	+				-2.9
6,619,567	+				+0.1
6,619,567	+				+0.3
6,619,567	+				-0.6
6,619,567	+				+0.2
6,619,568	-				+0.6
6,619,568	-				-0.6
6,619,568	-				+0.0
6,619,568	-				-0.6
6,619,568	-				-0.1
6,619,568	-				+0.5
6,619,568	-				-0.6
6,619,568	-				+0.7
6,619,568	-				+0.2
6,619,568	-				+0.5
6,619,568	-				-1.0
6,619,568	-				-1.3
6,619,568	-				+0.2
6,619,568	-				-0.3
6,619,568	-				+1.7
6,619,568	-				-3.1
6,619,568	-				+0.6
6,619,568	-				-1.0
6,619,569	+				-1.2
6,619,569	+				+0.3
6,619,569	+				+0.9
6,619,569	+				-1.1
6,619,569	+				-0.1
6,619,569	+				+0.7
6,619,569	+				+0.5
6,619,569	+				-0.4
6,619,569	+				+1.6
6,619,569	+				-0.5
6,619,569	+				-1.5
6,619,569	+				-1.9
6,619,569	+				-0.5
6,619,569	+				+0.8
6,619,569	+				+0.8
6,619,569	+				+1.0
6,619,569	+				-0.1
6,619,569	+				-0.2
6,619,569	+				+0.2
6,619,569	+				+0.1
6,619,569	+				-1.3
6,619,570	-				-3.3
6,619,570	-				+0.4
6,619,570	-				-1.3
6,619,570	-				-0.6
6,619,570	-				+1.3
6,619,570	-				-0.0
6,619,570	-				+0.3
6,619,570	-				-0.2
6,619,570	-				-0.5
6,619,570	-				+0.7
6,619,570	-				+0.5
6,619,570	-				-1.5
6,619,570	-				+1.4
6,619,570	-				-0.5
6,619,570	-				+0.5
6,619,570	-				-0.4
6,619,570	-				+1.6
6,619,570	-				-1.2
6,619,570	-				+0.6
6,619,570	-				+0.3
6,619,570	-				+1.5
6,619,572	+				+0.2
6,619,572	+				+0.1
6,619,572	+				-2.5
6,619,572	+				+0.4
6,619,572	+				+0.0
6,619,572	+				-0.3
6,619,573	-				+0.1
6,619,573	-				-0.6
6,619,573	-				-1.1
6,619,573	-				-0.2
6,619,573	-				-0.3
6,619,573	-				+0.3
6,619,573	-				-0.0
6,619,573	-				+0.7
6,619,573	-				+1.9
6,619,573	-				+1.2
6,619,573	-				-1.4
6,619,573	-				-1.4
6,619,573	-				+0.2
6,619,573	-				+1.1
6,619,573	-				-0.7
6,619,573	-				-1.5
6,619,585	-				-1.8
6,619,638	+				-1.3
6,619,639	-				+0.3
6,619,691	+				+0.1
6,619,691	+				+0.1
6,619,692	-				+0.5
6,619,692	-				+0.3
6,619,695	+				-0.1
6,619,695	+				-0.1
6,619,695	+				+0.8
6,619,696	-				+0.4
6,619,696	-				+0.4
6,619,696	-				+1.4
6,619,696	-				+0.5
6,619,696	-				+1.2
6,619,744	-				-0.7
6,619,744	-				+0.4
6,619,745	+				+1.7
6,619,745	+				+0.1
6,619,745	+				-0.1
6,619,745	+				-0.3
6,619,745	+				+0.3
6,619,746	-				+0.9
6,619,746	-				+1.1
6,619,746	-				+0.9
6,619,746	-				+1.0
6,619,746	-				+0.2
6,619,842	+				-0.1
6,619,842	+				+1.6
6,619,843	-				+0.3
6,619,843	-				+1.6
6,619,843	-				+0.3
6,619,843	-				-0.1
6,619,843	-				+0.8
6,619,843	-				+1.8
6,619,843	-				-0.5
6,619,845	+				+0.5
6,619,845	+				+1.1
6,619,845	+				-0.8
6,619,845	+				-1.5
6,619,845	+				-1.4
6,619,845	+				-0.1
6,619,846	-				+1.6
6,619,846	-				-2.3
6,619,846	-				+1.5
6,619,846	-				+0.4
6,619,852	+				+1.5
6,619,853	-				+0.5
6,619,853	-				+1.0
6,619,875	+				+0.2
6,619,875	+				-1.4
6,619,875	+				-0.9
6,619,875	+				+0.2
6,619,875	+				+1.4
6,619,875	+				-0.2
6,619,875	+				-0.9
6,619,875	+				+0.2
6,619,875	+				+0.4
6,619,875	+				+1.5
6,619,875	+				-0.5
6,619,875	+				-1.3
6,619,875	+				+0.7
6,619,875	+				+0.4
6,619,875	+				-0.9
6,619,875	+				+4.1
6,619,875	+				-0.9
6,619,875	+				+0.6
6,619,875	+				-0.5
6,619,875	+				-1.0
6,619,875	+				+1.9
6,619,875	+				-1.4
6,619,875	+				-0.0
6,619,875	+				+2.1
6,619,875	+				-1.3
6,619,875	+				-0.6
6,619,875	+				+0.3
6,619,876	-				+1.6
6,619,876	-				+1.6
6,619,876	-				+1.1
6,619,876	-				+0.5
6,619,876	-				-0.3
6,619,876	-				+0.3
6,619,876	-				+2.2
6,619,876	-				+1.9
6,619,876	-				+0.5
6,619,876	-				+3.1
6,619,876	-				+0.2
6,619,876	-				+0.1
6,619,876	-				-0.6
6,619,876	-				+0.7
6,619,876	-				-0.5
6,619,876	-				+0.2
6,619,876	-				+0.1
6,619,876	-				-1.4
6,619,876	-				-0.1
6,619,876	-				-0.5
6,619,876	-				+2.4
6,619,876	-				-0.6
6,619,876	-				+3.1
6,619,876	-				+2.1
6,619,876	-				+0.2
6,619,876	-				-0.3
6,619,923	+				+3.1
6,619,923	+				+0.6
6,619,923	+				-0.9
6,619,923	+				+0.7
6,619,924	-				+2.0
6,619,924	-				+1.4
6,619,924	-				+1.5
6,619,924	-				+0.0
6,619,924	-				+1.6
6,620,141	+		PFLU_RS29780	0.45	+0.9
6,620,196	+		PFLU_RS29780	0.59	+1.9
6,620,196	+		PFLU_RS29780	0.59	+2.7
6,620,196	+		PFLU_RS29780	0.59	+0.3
6,620,196	+		PFLU_RS29780	0.59	+0.7
6,620,196	+		PFLU_RS29780	0.59	+1.2
6,620,196	+		PFLU_RS29780	0.59	-0.4
6,620,196	+		PFLU_RS29780	0.59	-1.4
6,620,196	+		PFLU_RS29780	0.59	-0.9
6,620,196	+		PFLU_RS29780	0.59	+1.6
6,620,196	+		PFLU_RS29780	0.59	+0.4
6,620,197	-		PFLU_RS29780	0.59	+1.7
6,620,197	-		PFLU_RS29780	0.59	+0.5
6,620,197	-		PFLU_RS29780	0.59	+0.7
6,620,197	-		PFLU_RS29780	0.59	+0.8
6,620,197	-		PFLU_RS29780	0.59	+0.7
6,620,197	-		PFLU_RS29780	0.59	+1.9
6,620,197	-		PFLU_RS29780	0.59	+1.6
6,620,197	-		PFLU_RS29780	0.59	+1.2
6,620,197	-		PFLU_RS29780	0.59	+1.6
6,620,197	-		PFLU_RS29780	0.59	-0.6
6,620,197	-		PFLU_RS29780	0.59	+1.7
6,620,197	-		PFLU_RS29780	0.59	-1.9
6,620,197	-		PFLU_RS29780	0.59	+1.1
6,620,199	-		PFLU_RS29780	0.59	+0.6
6,620,199	-		PFLU_RS29780	0.59	+1.7
6,620,305	+		PFLU_RS29780	0.85	-1.3
6,620,305	+		PFLU_RS29780	0.85	+0.5
6,620,305	+		PFLU_RS29780	0.85	+0.5
6,620,305	+		PFLU_RS29780	0.85	-0.9
6,620,361	+				+1.4
6,620,407	+				+0.7
6,620,407	+				-0.8
6,620,407	+				+0.3
6,620,407	+				+0.1
6,620,407	+				-0.6
6,620,407	+				+0.6
6,620,407	+				-0.3
6,620,408	-				+0.1
6,620,408	-				+0.7
6,620,408	-				-1.4
6,620,408	-				+0.2
6,620,408	-				+0.5
6,620,408	-				+0.5
6,620,420	+				+0.4
6,620,420	+				+0.1
6,620,420	+				+0.9
6,620,421	-				+1.1
6,620,421	-				+0.3
6,620,421	-				-1.1
6,620,421	-				-0.4
6,620,421	-				-0.1
6,620,421	-				-0.1
6,620,421	-				+0.9
6,620,427	-				-0.6
6,620,446	+				+0.4
6,620,447	-				+3.6
6,620,522	+		PFLU_RS29785	0.11	+1.1
6,620,522	+		PFLU_RS29785	0.11	+0.7
6,620,522	+		PFLU_RS29785	0.11	-0.3
6,620,522	+		PFLU_RS29785	0.11	-0.7
6,620,522	+		PFLU_RS29785	0.11	+0.5
6,620,522	+		PFLU_RS29785	0.11	+0.4
6,620,522	+		PFLU_RS29785	0.11	-1.1
6,620,522	+		PFLU_RS29785	0.11	-0.7
6,620,522	+		PFLU_RS29785	0.11	-1.1
6,620,522	+		PFLU_RS29785	0.11	+0.6
6,620,522	+		PFLU_RS29785	0.11	+1.5
6,620,522	+		PFLU_RS29785	0.11	+0.1
6,620,522	+		PFLU_RS29785	0.11	+2.1
6,620,522	+		PFLU_RS29785	0.11	-0.4
6,620,522	+		PFLU_RS29785	0.11	-0.9
6,620,522	+		PFLU_RS29785	0.11	+0.8
6,620,522	+		PFLU_RS29785	0.11	-0.9
6,620,522	+		PFLU_RS29785	0.11	-0.5
6,620,522	+		PFLU_RS29785	0.11	-0.8
6,620,522	+		PFLU_RS29785	0.11	-0.1
6,620,522	+		PFLU_RS29785	0.11	-0.9
6,620,522	+		PFLU_RS29785	0.11	-1.0
6,620,523	-		PFLU_RS29785	0.11	+0.9
6,620,523	-		PFLU_RS29785	0.11	-2.3
6,620,523	-		PFLU_RS29785	0.11	+1.1
6,620,523	-		PFLU_RS29785	0.11	-1.6
6,620,523	-		PFLU_RS29785	0.11	+1.4
6,620,523	-		PFLU_RS29785	0.11	-1.4
6,620,523	-		PFLU_RS29785	0.11	+0.9
6,620,523	-		PFLU_RS29785	0.11	+0.4
6,620,523	-		PFLU_RS29785	0.11	-1.5
6,620,523	-		PFLU_RS29785	0.11	-1.3
6,620,523	-		PFLU_RS29785	0.11	+0.4
6,620,523	-		PFLU_RS29785	0.11	+1.6
6,620,523	-		PFLU_RS29785	0.11	-1.3
6,620,523	-		PFLU_RS29785	0.11	-0.5
6,620,523	-		PFLU_RS29785	0.11	-2.2
6,620,523	-		PFLU_RS29785	0.11	+2.4
6,620,523	-		PFLU_RS29785	0.11	+1.6
6,620,523	-		PFLU_RS29785	0.11	-0.4
6,620,523	-		PFLU_RS29785	0.11	+1.0
6,620,523	-		PFLU_RS29785	0.11	-0.1
6,620,523	-		PFLU_RS29785	0.11	+1.4
6,620,523	-		PFLU_RS29785	0.11	+0.6
6,620,523	-		PFLU_RS29785	0.11	-1.5
6,620,523	-		PFLU_RS29785	0.11	+0.5
6,620,523	-		PFLU_RS29785	0.11	-0.3
6,620,523	-		PFLU_RS29785	0.11	+0.2
6,620,523	-		PFLU_RS29785	0.11	+0.5
6,620,523	-		PFLU_RS29785	0.11	+0.8
6,620,523	-		PFLU_RS29785	0.11	+1.5
6,620,523	-		PFLU_RS29785	0.11	-0.4
6,620,523	-		PFLU_RS29785	0.11	+0.6
6,620,524	+		PFLU_RS29785	0.11	-0.9
6,620,524	+		PFLU_RS29785	0.11	+0.9
6,620,524	+		PFLU_RS29785	0.11	+0.5
6,620,524	+		PFLU_RS29785	0.11	-0.4
6,620,524	+		PFLU_RS29785	0.11	+0.1
6,620,524	+		PFLU_RS29785	0.11	-2.3
6,620,524	+		PFLU_RS29785	0.11	+0.5
6,620,524	+		PFLU_RS29785	0.11	+0.5
6,620,524	+		PFLU_RS29785	0.11	-0.2
6,620,524	+		PFLU_RS29785	0.11	+1.7
6,620,524	+		PFLU_RS29785	0.11	+0.5
6,620,524	+		PFLU_RS29785	0.11	+1.4
6,620,525	-		PFLU_RS29785	0.12	-0.4
6,620,525	-		PFLU_RS29785	0.12	+0.2
6,620,525	-		PFLU_RS29785	0.12	-1.7
6,620,525	-		PFLU_RS29785	0.12	-1.6
6,620,525	-		PFLU_RS29785	0.12	+0.6
6,620,525	-		PFLU_RS29785	0.12	-1.8
6,620,525	-		PFLU_RS29785	0.12	-1.6
6,620,525	-		PFLU_RS29785	0.12	+0.5
6,620,525	-		PFLU_RS29785	0.12	-1.1
6,620,525	-		PFLU_RS29785	0.12	-1.9
6,620,525	-		PFLU_RS29785	0.12	+0.6
6,620,525	-		PFLU_RS29785	0.12	+1.3
6,620,525	-		PFLU_RS29785	0.12	-1.6
6,620,525	-		PFLU_RS29785	0.12	-1.9
6,620,525	-		PFLU_RS29785	0.12	+1.1
6,620,525	-		PFLU_RS29785	0.12	-1.6
6,620,525	-		PFLU_RS29785	0.12	-0.0
6,620,525	-		PFLU_RS29785	0.12	+2.5
6,620,525	-		PFLU_RS29785	0.12	+1.7
6,620,525	-		PFLU_RS29785	0.12	-0.5
6,620,525	-		PFLU_RS29785	0.12	+0.4
6,620,525	-		PFLU_RS29785	0.12	+1.2
6,620,525	-		PFLU_RS29785	0.12	-0.9
6,620,525	-		PFLU_RS29785	0.12	+2.9
6,620,606	+		PFLU_RS29785	0.21	-0.4
6,620,717	+		PFLU_RS29785	0.33	-2.5
6,620,717	+		PFLU_RS29785	0.33	+1.2
6,620,717	+		PFLU_RS29785	0.33	-1.6
6,620,717	+		PFLU_RS29785	0.33	-0.1
6,620,718	-		PFLU_RS29785	0.33	-0.3
6,620,718	-		PFLU_RS29785	0.33	-2.6
6,620,718	-		PFLU_RS29785	0.33	-1.4
6,620,718	-		PFLU_RS29785	0.33	-0.1
6,620,782	+		PFLU_RS29785	0.40	+1.4
6,620,783	-		PFLU_RS29785	0.40	-0.9
6,620,882	+		PFLU_RS29785	0.51	+0.5
6,620,928	+		PFLU_RS29785	0.56	-1.5
6,620,928	+		PFLU_RS29785	0.56	-1.4
6,620,928	+		PFLU_RS29785	0.56	-0.7
6,620,928	+		PFLU_RS29785	0.56	+1.0
6,620,928	+		PFLU_RS29785	0.56	-0.3
6,620,928	+		PFLU_RS29785	0.56	+0.3
6,620,928	+		PFLU_RS29785	0.56	+0.1
6,620,928	+		PFLU_RS29785	0.56	+0.1
6,620,928	+		PFLU_RS29785	0.56	-2.1
6,620,928	+		PFLU_RS29785	0.56	+0.4
6,620,928	+		PFLU_RS29785	0.56	+0.1
6,620,928	+		PFLU_RS29785	0.56	+0.7
6,620,928	+		PFLU_RS29785	0.56	+0.7
6,620,928	+		PFLU_RS29785	0.56	+0.7
6,620,928	+		PFLU_RS29785	0.56	+0.5
6,620,928	+		PFLU_RS29785	0.56	-1.5
6,620,928	+		PFLU_RS29785	0.56	+2.5
6,620,929	-		PFLU_RS29785	0.56	-1.8
6,620,929	-		PFLU_RS29785	0.56	+0.8
6,620,929	-		PFLU_RS29785	0.56	-0.8
6,620,929	-		PFLU_RS29785	0.56	-0.5
6,620,929	-		PFLU_RS29785	0.56	-0.2
6,620,929	-		PFLU_RS29785	0.56	+1.5
6,620,951	+		PFLU_RS29785	0.59	+1.2
6,620,952	-		PFLU_RS29785	0.59	+0.7
6,620,985	+		PFLU_RS29785	0.63	+2.6
6,620,985	+		PFLU_RS29785	0.63	+0.5
6,620,985	+		PFLU_RS29785	0.63	+0.9
6,620,985	+		PFLU_RS29785	0.63	+0.5
6,620,985	+		PFLU_RS29785	0.63	-0.9
6,620,985	+		PFLU_RS29785	0.63	-1.2
6,620,985	+		PFLU_RS29785	0.63	+0.6
6,620,985	+		PFLU_RS29785	0.63	-0.9
6,620,985	+		PFLU_RS29785	0.63	+1.8
6,620,985	+		PFLU_RS29785	0.63	+1.1
6,620,985	+		PFLU_RS29785	0.63	-2.0
6,620,985	+		PFLU_RS29785	0.63	+0.7
6,620,986	-		PFLU_RS29785	0.63	-0.2
6,620,986	-		PFLU_RS29785	0.63	-0.5
6,620,986	-		PFLU_RS29785	0.63	+0.8
6,620,986	-		PFLU_RS29785	0.63	+0.5
6,620,986	-		PFLU_RS29785	0.63	+0.8
6,620,986	-		PFLU_RS29785	0.63	-1.4
6,620,986	-		PFLU_RS29785	0.63	+0.3
6,620,986	-		PFLU_RS29785	0.63	-0.3
6,620,986	-		PFLU_RS29785	0.63	-0.3
6,620,986	-		PFLU_RS29785	0.63	-0.3
6,620,986	-		PFLU_RS29785	0.63	-0.5
6,620,986	-		PFLU_RS29785	0.63	-0.3
6,620,986	-		PFLU_RS29785	0.63	-0.9
6,620,986	-		PFLU_RS29785	0.63	-2.3
6,620,988	-		PFLU_RS29785	0.63	-0.0
6,621,064	-		PFLU_RS29785	0.71	+0.6
6,621,064	-		PFLU_RS29785	0.71	+1.3
6,621,064	-		PFLU_RS29785	0.71	-1.9
6,621,064	-		PFLU_RS29785	0.71	+0.1
6,621,064	-		PFLU_RS29785	0.71	+0.7
6,621,089	+		PFLU_RS29785	0.74	+0.2
6,621,089	+		PFLU_RS29785	0.74	+0.5
6,621,090	-		PFLU_RS29785	0.74	-1.3
6,621,090	-		PFLU_RS29785	0.74	+0.1
6,621,090	-		PFLU_RS29785	0.74	-1.3
6,621,318	+				-0.5
6,621,318	+				-1.2