Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS09255

Experiment: p-Coumaric (C) and Ammonium chloride (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) and Ammonium chloride (N); with MOPS
2,048,043	-		PFLU_RS09250	0.25	-1.6
2,048,043	-		PFLU_RS09250	0.25	-0.6
2,048,188	+		PFLU_RS09250	0.40	-0.0
2,048,836	+				+4.2
2,048,836	+				-1.6
2,048,836	+				+0.3
2,048,836	+				-0.3
2,048,836	+				-2.6
2,048,836	+				-1.0
2,048,836	+				+1.0
2,048,836	+				+0.8
2,048,836	+				-0.1
2,048,836	+				+0.5
2,048,836	+				-0.6
2,048,836	+				+0.6
2,048,836	+				-0.2
2,048,836	+				-1.6
2,048,836	+				-0.6
2,048,836	+				+0.1
2,048,836	+				+0.6
2,048,836	+				+1.2
2,048,836	+				+1.1
2,048,836	+				+0.8
2,048,837	-				+1.8
2,048,837	-				+0.4
2,048,837	-				-1.1
2,048,837	-				-1.6
2,048,837	-				+0.1
2,048,837	-				+1.9
2,048,837	-				+0.9
2,048,837	-				-2.2
2,048,837	-				+1.4
2,048,837	-				-0.2
2,048,837	-				+0.5
2,048,837	-				+1.0
2,048,837	-				+0.8
2,048,837	-				-3.0
2,048,837	-				+1.5
2,048,837	-				-2.9
2,048,837	-				+1.4
2,048,837	-				-0.6
2,048,837	-				+1.3
2,048,837	-				+1.8
2,048,837	-				-1.3
2,048,837	-				+2.5
2,048,845	+				+1.4
2,048,845	+				-0.7
2,048,845	+				+2.0
2,048,846	-				+1.8
2,048,846	-				+0.1
2,048,904	+				+0.3
2,048,904	+				+0.2
2,048,904	+				-0.2
2,048,905	-				+0.0
2,048,905	-				+1.8
2,048,905	-				-0.7
2,048,905	-				-0.8
2,048,905	-				-0.6
2,048,905	-				+0.9
2,048,905	-				+0.4
2,048,905	-				+2.8
2,048,905	-				+0.3
2,048,905	-				+1.1
2,049,463	+		PFLU_RS09255	0.61	+2.3
2,049,464	-		PFLU_RS09255	0.61	-0.4
2,049,464	-		PFLU_RS09255	0.61	-2.1
2,049,523	+		PFLU_RS09255	0.67	+0.2
2,049,523	+		PFLU_RS09255	0.67	+0.2
2,049,523	+		PFLU_RS09255	0.67	+1.0
2,049,523	+		PFLU_RS09255	0.67	+1.0
2,049,523	+		PFLU_RS09255	0.67	-2.9
2,049,523	+		PFLU_RS09255	0.67	-0.7
2,049,524	-		PFLU_RS09255	0.67	-1.0
2,049,524	-		PFLU_RS09255	0.67	+2.0
2,049,525	+		PFLU_RS09255	0.68	+0.2
2,049,525	+		PFLU_RS09255	0.68	+0.9
2,049,525	+		PFLU_RS09255	0.68	+0.2
2,049,525	+		PFLU_RS09255	0.68	+1.8
2,049,525	+		PFLU_RS09255	0.68	+0.2
2,049,525	+		PFLU_RS09255	0.68	+0.2
2,049,525	+		PFLU_RS09255	0.68	-2.2
2,049,525	+		PFLU_RS09255	0.68	-0.1
2,049,525	+		PFLU_RS09255	0.68	-0.8
2,049,525	+		PFLU_RS09255	0.68	+2.8
2,049,525	+		PFLU_RS09255	0.68	+0.8
2,049,525	+		PFLU_RS09255	0.68	+1.0
2,049,526	-		PFLU_RS09255	0.68	-1.4
2,049,526	-		PFLU_RS09255	0.68	+1.1
2,049,526	-		PFLU_RS09255	0.68	-0.2
2,049,526	-		PFLU_RS09255	0.68	-2.5
2,049,526	-		PFLU_RS09255	0.68	+2.8
2,049,526	-		PFLU_RS09255	0.68	+0.6
2,049,526	-		PFLU_RS09255	0.68	+0.4
2,049,526	-		PFLU_RS09255	0.68	+1.6
2,049,526	-		PFLU_RS09255	0.68	+0.6
2,049,526	-		PFLU_RS09255	0.68	+0.2
2,049,676	+		PFLU_RS09255	0.84	+2.0
2,049,677	-		PFLU_RS09255	0.84	+4.1
2,049,699	+		PFLU_RS09255	0.86	-0.0
2,049,699	+		PFLU_RS09255	0.86	+0.4
2,049,699	+		PFLU_RS09255	0.86	+1.1
2,049,699	+		PFLU_RS09255	0.86	-0.5
2,049,699	+		PFLU_RS09255	0.86	-0.8
2,049,700	-		PFLU_RS09255	0.87	+1.8
2,049,700	-		PFLU_RS09255	0.87	+1.2
2,049,700	-		PFLU_RS09255	0.87	+0.6
2,049,700	-		PFLU_RS09255	0.87	+1.0
2,049,700	-		PFLU_RS09255	0.87	-2.3
2,049,700	-		PFLU_RS09255	0.87	-0.8
2,049,798	+				+0.4
2,049,798	+				+1.1
2,049,798	+				-0.8
2,049,798	+				+0.2
2,049,799	-				+1.2
2,049,799	-				+4.6
2,049,799	-				+1.2
2,049,799	-				+0.8
2,049,799	-				-0.9
2,049,799	-				+0.0
2,049,802	+				-0.8
2,049,802	+				+0.5
2,049,802	+				-1.9
2,049,802	+				+0.9
2,049,802	+				-1.9
2,049,802	+				+1.8
2,049,802	+				-1.6
2,049,802	+				-0.6
2,049,802	+				+2.0
2,049,802	+				+1.4
2,049,802	+				-2.2
2,049,802	+				+2.2
2,049,802	+				-0.5
2,049,802	+				-0.7
2,049,802	+				-0.8
2,049,802	+				-1.2
2,049,802	+				+1.3
2,049,802	+				+2.4
2,049,802	+				+0.6
2,049,802	+				-0.2
2,049,803	-				-0.1
2,049,803	-				+1.9
2,049,803	-				+1.4
2,049,803	-				-2.0
2,049,803	-				-0.4
2,049,803	-				+1.4
2,049,803	-				+1.8
2,049,803	-				+1.0
2,049,803	-				+1.3
2,049,803	-				+0.8
2,049,803	-				+1.6
2,049,803	-				-0.2
2,049,803	-				+2.1
2,049,803	-				+0.8
2,049,803	-				-0.5
2,049,803	-				+1.3
2,049,803	-				-0.2
2,049,803	-				+1.7
2,049,803	-				+1.8
2,049,841	+				-0.1
2,049,841	+				+0.8
2,049,842	-				-0.5
2,049,842	-				-0.3
2,049,843	+				-2.8
2,049,843	+				-0.6
2,049,843	+				+0.5
2,049,843	+				+0.4
2,049,843	+				-0.5
2,049,843	+				-2.3
2,049,843	+				+1.4
2,049,843	+				+0.2
2,049,843	+				+2.4
2,049,843	+				-0.6
2,049,843	+				-1.9
2,049,844	-				-0.5
2,049,844	-				+0.5
2,049,844	-				-0.8
2,049,844	-				-0.5
2,049,844	-				+0.4
2,049,844	-				-0.4
2,049,844	-				-0.0
2,049,858	+				-0.9
2,049,858	+				-1.1
2,049,859	-				-2.6
2,049,859	-				+0.1
2,049,859	-				+1.1
2,049,859	-				-0.4
2,049,859	-				-0.7
2,049,892	+				+0.4
2,049,893	-				+0.8
2,049,893	-				-1.1
2,049,923	+				+0.4
2,049,957	+				-0.4
2,050,163	+				-0.5
2,050,278	+				-0.7
2,050,306	+				+1.8
2,050,503	+				-1.0
2,050,503	+				-0.5
2,050,503	+				+1.3
2,050,516	+				+0.6
2,050,549	+				+0.7
2,050,615	+				+0.4
2,050,616	-				-2.0
2,050,616	-				-1.2
2,050,616	-				-2.6
2,050,616	-				-0.9
2,050,619	+				+0.6
2,050,620	-				+0.8
2,050,627	+				-0.7
2,050,627	+				-0.8
2,050,627	+				+1.1
2,050,627	+				-0.1
2,050,627	+				-2.6
2,050,628	-				+0.6
2,050,628	-				-1.4
2,050,628	-				-1.8
2,050,628	-				+1.5
2,050,632	-				-0.7
2,050,652	+				+0.4
2,050,652	+				+0.4
2,050,653	-				+0.9
2,050,678	+				+0.8
2,050,703	+				-0.8
2,050,703	+				+1.4
2,050,703	+				-1.7
2,050,703	+				-0.6
2,050,703	+				-0.7
2,050,703	+				+3.1
2,050,703	+				+2.1
2,050,703	+				+1.3
2,050,703	+				+0.6
2,050,703	+				-1.9
2,050,703	+				+0.8
2,050,703	+				+1.3
2,050,703	+				-1.9
2,050,703	+				-1.0
2,050,703	+				-0.1
2,050,703	+				+1.3
2,050,703	+				-0.1
2,050,704	-				+0.4
2,050,704	-				+1.3
2,050,704	-				+1.0
2,050,704	-				+0.7
2,050,704	-				+0.8
2,050,704	-				+1.8
2,050,704	-				+0.8
2,050,704	-				+0.6
2,050,750	+				-0.4
2,050,750	+				+0.2
2,050,750	+				+0.3
2,050,750	+				+1.8
2,050,751	-				-0.7
2,050,751	-				-0.8
2,050,751	-				-0.6
2,050,787	+				+0.8
2,050,787	+				+0.8
2,050,787	+				+2.3
2,050,787	+				-1.2
2,050,787	+				-0.6
2,050,787	+				-0.1
2,050,787	+				+1.1
2,050,788	-				+1.3
2,050,788	-				-1.3
2,050,788	-				+0.4
2,050,789	+				+0.2
2,050,789	+				+0.2
2,050,789	+				+0.6
2,050,789	+				+0.7
2,050,789	+				-1.7
2,050,789	+				-0.2
2,050,789	+				+2.0
2,050,789	+				-0.6
2,050,789	+				+0.6
2,050,789	+				-1.0
2,050,789	+				+0.2
2,050,789	+				-3.1
2,050,789	+				-1.6
2,050,789	+				-1.9
2,050,789	+				-0.9
2,050,789	+				+1.3
2,050,789	+				-1.1
2,050,789	+				-1.0
2,050,789	+				-0.2
2,050,789	+				+1.8
2,050,789	+				+0.5
2,050,789	+				+0.1
2,050,789	+				-1.7
2,050,790	-				+1.6
2,050,790	-				-0.9
2,050,790	-				+1.0
2,050,790	-				+1.2
2,050,790	-				+1.1
2,050,790	-				-2.3
2,050,790	-				-1.6
2,050,790	-				-2.7
2,050,790	-				-0.8
2,050,790	-				+1.0
2,050,790	-				-0.6
2,050,790	-				-2.3
2,050,790	-				+1.5
2,050,790	-				-0.2
2,050,790	-				-0.6
2,050,790	-				-1.0
2,050,790	-				-0.2
2,050,790	-				-0.5
2,050,790	-				-0.4
2,050,790	-				-1.1
2,050,790	-				-0.2
2,050,790	-				-0.1
2,050,790	-				-0.4
2,050,790	-				+1.3
2,050,790	-				+1.2
2,050,790	-				-1.2
2,050,794	+				-0.7
2,050,794	+				-1.6
2,050,795	-				+1.8
2,050,795	-				+0.4
2,050,795	-				-0.7
2,050,795	-				+0.5