Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS06205

Experiment: p-Coumaric (C) and Ammonium chloride (N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	p-Coumaric (C) and Ammonium chloride (N); with MOPS
1,388,126	+		PFLU_RS06200	0.68	+1.0
1,388,126	+		PFLU_RS06200	0.68	-0.6
1,388,126	+		PFLU_RS06200	0.68	+0.4
1,388,126	+		PFLU_RS06200	0.68	-0.1
1,388,126	+		PFLU_RS06200	0.68	+0.9
1,388,126	+		PFLU_RS06200	0.68	+1.1
1,388,126	+		PFLU_RS06200	0.68	+0.3
1,388,126	+		PFLU_RS06200	0.68	-1.3
1,388,126	+		PFLU_RS06200	0.68	+0.9
1,388,126	+		PFLU_RS06200	0.68	+2.8
1,388,126	+		PFLU_RS06200	0.68	+0.2
1,388,126	+		PFLU_RS06200	0.68	+0.9
1,388,126	+		PFLU_RS06200	0.68	-1.2
1,388,126	+		PFLU_RS06200	0.68	+0.5
1,388,126	+		PFLU_RS06200	0.68	+0.4
1,388,126	+		PFLU_RS06200	0.68	+0.8
1,388,127	-		PFLU_RS06200	0.68	+0.4
1,388,127	-		PFLU_RS06200	0.68	+0.6
1,388,127	-		PFLU_RS06200	0.68	-0.1
1,388,127	-		PFLU_RS06200	0.68	+0.1
1,388,127	-		PFLU_RS06200	0.68	+1.3
1,388,127	-		PFLU_RS06200	0.68	+1.2
1,388,127	-		PFLU_RS06200	0.68	+0.6
1,388,127	-		PFLU_RS06200	0.68	+1.5
1,388,127	-		PFLU_RS06200	0.68	-0.7
1,388,127	-		PFLU_RS06200	0.68	+0.7
1,388,132	+		PFLU_RS06200	0.69	+3.3
1,388,133	-		PFLU_RS06200	0.69	-0.3
1,388,367	+		PFLU_RS06200	0.78	+0.3
1,388,367	+		PFLU_RS06200	0.78	+0.7
1,388,367	+		PFLU_RS06200	0.78	+1.6
1,388,368	-		PFLU_RS06200	0.78	+0.9
1,388,368	-		PFLU_RS06200	0.78	+1.0
1,388,368	-		PFLU_RS06200	0.78	+0.4
1,388,368	-		PFLU_RS06200	0.78	-0.8
1,388,397	+		PFLU_RS06200	0.79	-2.6
1,388,397	+		PFLU_RS06200	0.79	+1.2
1,388,458	+		PFLU_RS06200	0.82	+0.7
1,388,459	-		PFLU_RS06200	0.82	+1.1
1,388,459	-		PFLU_RS06200	0.82	+0.3
1,388,666	+		PFLU_RS06200	0.90	+1.8
1,388,666	+		PFLU_RS06200	0.90	+0.4
1,388,666	+		PFLU_RS06200	0.90	+0.5
1,388,792	+				+1.6
1,388,792	+				+0.0
1,388,792	+				+0.8
1,388,792	+				+1.6
1,388,792	+				+1.4
1,388,792	+				+1.2
1,388,792	+				+1.9
1,388,792	+				-0.7
1,388,792	+				+0.4
1,388,792	+				+0.3
1,388,792	+				-0.6
1,388,792	+				+1.1
1,388,792	+				+1.1
1,388,792	+				+2.2
1,388,792	+				-0.1
1,388,792	+				+1.4
1,388,793	-				+0.8
1,388,793	-				+1.0
1,388,793	-				+0.7
1,388,793	-				-0.7
1,388,793	-				+1.6
1,388,793	-				+1.2
1,388,793	-				+0.3
1,388,793	-				-1.7
1,388,793	-				+1.7
1,388,827	+				+0.8
1,388,867	+				-1.2
1,388,867	+				+2.3
1,388,867	+				+1.0
1,388,867	+				+1.0
1,388,868	-				+0.7
1,388,868	-				-0.8
1,388,868	-				+1.1
1,388,868	-				+0.0
1,388,868	-				-0.3
1,388,868	-				+1.8
1,388,868	-				+1.1
1,388,868	-				-0.3
1,388,868	-				+0.2
1,388,868	-				+0.4
1,388,868	-				+0.9
1,388,868	-				-0.7
1,388,897	-				-0.0
1,388,897	-				-0.8
1,388,922	+				+1.5
1,388,922	+				+1.3
1,388,922	+				+0.1
1,388,922	+				+1.2
1,388,922	+				-0.2
1,388,922	+				+1.0
1,388,922	+				-0.1
1,388,923	-				+0.1
1,388,923	-				-1.6
1,388,971	-				+0.0
1,388,980	+				+0.4
1,388,981	-				+2.0
1,388,981	-				+0.4
1,388,981	-				-0.7
1,389,013	+				+1.3
1,389,013	+				+0.1
1,389,013	+				+1.3
1,389,013	+				+0.7
1,389,014	-				-1.2
1,389,014	-				+0.4
1,389,014	-				-0.5
1,389,045	+				-1.7
1,389,045	+				-1.6
1,389,045	+				-2.6
1,389,045	+				-1.4
1,389,046	-				-2.3
1,389,046	-				-0.0
1,389,046	-				-2.0
1,389,046	-				-1.9
1,389,046	-				-0.7
1,389,047	+				-1.2
1,389,047	+				+0.5
1,389,048	-				+0.4
1,389,048	-				+0.4
1,389,048	-				-1.5
1,389,048	-				-1.0
1,389,079	+				-1.5
1,389,080	-				+2.0
1,389,080	-				-3.0
1,389,080	-				-1.2
1,389,080	-				-0.4
1,389,155	-		PFLU_RS06205	0.25	-0.4
1,389,155	-		PFLU_RS06205	0.25	-2.7
1,389,163	-		PFLU_RS06205	0.29	-0.2
1,389,163	-		PFLU_RS06205	0.29	+0.7
1,389,199	+		PFLU_RS06205	0.46	-2.5
1,389,200	-		PFLU_RS06205	0.46	-0.4
1,389,256	+		PFLU_RS06205	0.73	-2.0
1,389,256	+		PFLU_RS06205	0.73	-1.4
1,389,256	+		PFLU_RS06205	0.73	-1.3
1,389,308	+				-2.0
1,389,308	+				+1.1
1,389,308	+				+0.8
1,389,308	+				-2.0
1,389,309	-				-1.7
1,389,309	-				+0.9
1,389,309	-				-0.6
1,389,309	-				-0.5
1,389,309	-				-0.6
1,389,309	-				+1.1
1,389,309	-				+1.4
1,389,309	-				-2.0
1,389,310	+				-0.5
1,389,310	+				+0.6
1,389,310	+				-1.5
1,389,310	+				+0.2
1,389,311	-				-0.5
1,389,311	-				+1.6
1,389,311	-				+2.2
1,389,311	-				-0.6
1,389,311	-				+1.2
1,389,311	-				+0.7
1,389,311	-				+2.0
1,389,311	-				-0.9
1,389,311	-				-2.0
1,389,324	+				+1.0
1,389,324	+				+0.0
1,389,324	+				-1.4
1,389,325	-				+0.1
1,389,325	-				-1.4
1,389,325	-				-2.4
1,389,325	-				-1.8
1,389,390	+				+1.1
1,389,390	+				-1.1
1,389,429	-				-1.8
1,389,446	-				-2.0
1,389,477	+				-1.2
1,389,477	+				+2.0
1,389,477	+				+1.1
1,389,477	+				-0.7
1,389,686	-		PFLU_RS06210	0.50	-3.9
1,389,705	+		PFLU_RS06210	0.55	+1.2
1,389,705	+		PFLU_RS06210	0.55	-0.6
1,389,706	-		PFLU_RS06210	0.55	+1.0
1,389,706	-		PFLU_RS06210	0.55	+0.1
1,389,725	+		PFLU_RS06210	0.60	+1.4
1,389,725	+		PFLU_RS06210	0.60	+1.1
1,389,732	+		PFLU_RS06210	0.62	-1.6
1,389,733	-		PFLU_RS06210	0.62	-0.9
1,389,733	-		PFLU_RS06210	0.62	+1.2
1,389,733	-		PFLU_RS06210	0.62	-2.5
1,389,733	-		PFLU_RS06210	0.62	+1.3
1,389,754	+		PFLU_RS06210	0.68	-1.9
1,389,754	+		PFLU_RS06210	0.68	+2.4
1,389,754	+		PFLU_RS06210	0.68	+0.6
1,389,754	+		PFLU_RS06210	0.68	+0.0
1,389,754	+		PFLU_RS06210	0.68	-2.6
1,389,754	+		PFLU_RS06210	0.68	+0.1
1,389,755	-		PFLU_RS06210	0.68	+0.3
1,389,755	-		PFLU_RS06210	0.68	-1.5
1,389,755	-		PFLU_RS06210	0.68	-0.8
1,389,755	-		PFLU_RS06210	0.68	+0.6
1,389,755	-		PFLU_RS06210	0.68	-0.7
1,389,826	+		PFLU_RS06210	0.87	+1.5
1,389,826	+		PFLU_RS06210	0.87	+0.1
1,389,826	+		PFLU_RS06210	0.87	+0.7
1,389,826	+		PFLU_RS06210	0.87	+0.4
1,389,826	+		PFLU_RS06210	0.87	+1.1
1,389,827	-		PFLU_RS06210	0.87	+1.5
1,389,827	-		PFLU_RS06210	0.87	-3.9
1,389,827	-		PFLU_RS06210	0.87	-1.5
1,389,827	-		PFLU_RS06210	0.87	+1.1
1,389,827	-		PFLU_RS06210	0.87	-0.2
1,389,827	-		PFLU_RS06210	0.87	+1.7
1,389,827	-		PFLU_RS06210	0.87	+2.2
1,389,850	+				-1.5
1,389,851	-				+0.9
1,389,851	-				-0.5
1,389,858	+				-0.8
1,389,858	+				+2.0
1,389,858	+				-2.8
1,389,858	+				-0.4
1,389,858	+				-2.4
1,389,858	+				-0.9
1,389,858	+				-0.5
1,389,858	+				+1.3
1,389,858	+				+0.8
1,389,858	+				-0.7
1,389,859	-				+1.8
1,389,859	-				+1.0
1,389,859	-				+1.7
1,389,859	-				-2.4
1,389,859	-				+0.1
1,389,859	-				-0.7
1,389,859	-				-0.1
1,389,859	-				-0.2
1,389,859	-				-0.0
1,389,859	-				-0.5
1,389,931	+				+2.1
1,389,931	+				-0.2
1,389,931	+				-0.4
1,389,931	+				-0.1
1,389,932	-				+0.7
1,389,946	+				+0.5
1,389,946	+				-0.2
1,389,947	-				+0.1
1,389,947	-				+1.6
1,389,947	-				+0.8
1,389,947	-				-2.3
1,389,953	-				-1.2
1,390,159	+		PFLU_RS06215	0.28	-0.0
1,390,159	+		PFLU_RS06215	0.28	+0.5
1,390,160	-		PFLU_RS06215	0.28	-1.7
1,390,160	-		PFLU_RS06215	0.28	-0.0
1,390,160	-		PFLU_RS06215	0.28	+1.1
1,390,160	-		PFLU_RS06215	0.28	-1.9
1,390,177	+		PFLU_RS06215	0.30	-0.4
1,390,178	-		PFLU_RS06215	0.31	+0.2
1,390,179	+		PFLU_RS06215	0.31	-1.9
1,390,179	+		PFLU_RS06215	0.31	+1.1
1,390,179	+		PFLU_RS06215	0.31	+1.1