Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS29885

Experiment: Glucose (C) and Ammonium chloride (N); with MOPS; with PEG

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and Ammonium chloride (N); with MOPS; with PEG
6,645,201	+		PFLU_RS29880	0.44	-2.4
6,645,243	+		PFLU_RS29880	0.46	-1.0
6,645,243	+		PFLU_RS29880	0.46	-2.5
6,645,243	+		PFLU_RS29880	0.46	-1.8
6,645,244	-		PFLU_RS29880	0.47	-3.2
6,645,439	+		PFLU_RS29880	0.60	-2.3
6,645,439	+		PFLU_RS29880	0.60	-1.4
6,645,553	+		PFLU_RS29880	0.68	-2.5
6,645,553	+		PFLU_RS29880	0.68	-1.9
6,645,553	+		PFLU_RS29880	0.68	-3.0
6,645,553	+		PFLU_RS29880	0.68	-0.9
6,645,553	+		PFLU_RS29880	0.68	-1.7
6,645,554	-		PFLU_RS29880	0.68	-1.8
6,645,554	-		PFLU_RS29880	0.68	-2.8
6,645,825	+		PFLU_RS29880	0.88	-3.6
6,645,826	-		PFLU_RS29880	0.88	-0.2
6,645,906	+				-1.2
6,645,907	-				-1.2
6,645,907	-				-2.1
6,645,907	-				-2.3
6,645,996	-				-2.6
6,646,041	+				-3.4
6,646,041	+				-2.5
6,646,041	+				-2.9
6,646,042	-				-1.3
6,646,042	-				-1.1
6,646,097	-				-0.3
6,646,097	-				+0.1
6,646,156	+				-2.1
6,646,156	+				-2.5
6,646,159	-				-1.1
6,646,201	-				-0.0
6,646,267	+				-1.4
6,646,267	+				-1.1
6,646,267	+				-0.8
6,646,267	+				-2.2
6,646,267	+				-2.6
6,646,268	-				-3.7
6,646,268	-				-2.0
6,646,268	-				-0.7
6,646,268	-				-2.2
6,646,311	+		PFLU_RS29885	0.12	-1.0
6,646,311	+		PFLU_RS29885	0.12	-2.6
6,646,316	+		PFLU_RS29885	0.12	-0.3
6,646,316	+		PFLU_RS29885	0.12	-0.3
6,646,317	-		PFLU_RS29885	0.13	-3.1
6,646,317	-		PFLU_RS29885	0.13	-1.7
6,646,363	+		PFLU_RS29885	0.17	-1.0
6,646,363	+		PFLU_RS29885	0.17	-2.6
6,646,363	+		PFLU_RS29885	0.17	-3.8
6,646,363	+		PFLU_RS29885	0.17	-2.6
6,646,363	+		PFLU_RS29885	0.17	-1.5
6,646,364	-		PFLU_RS29885	0.17	-2.6
6,646,364	-		PFLU_RS29885	0.17	-3.1
6,646,381	+		PFLU_RS29885	0.19	-1.5
6,646,382	-		PFLU_RS29885	0.19	-2.1
6,646,382	-		PFLU_RS29885	0.19	-0.6
6,646,452	+		PFLU_RS29885	0.26	-2.1
6,646,453	-		PFLU_RS29885	0.26	-2.0
6,646,522	+		PFLU_RS29885	0.34	-2.3
6,646,522	+		PFLU_RS29885	0.34	-2.4
6,646,523	-		PFLU_RS29885	0.34	-2.7
6,646,696	-		PFLU_RS29885	0.51	-2.5
6,646,777	+		PFLU_RS29885	0.60	-1.3
6,646,777	+		PFLU_RS29885	0.60	-2.0
6,646,777	+		PFLU_RS29885	0.60	-1.3
6,646,777	+		PFLU_RS29885	0.60	-1.3
6,646,777	+		PFLU_RS29885	0.60	-1.0
6,646,777	+		PFLU_RS29885	0.60	-1.0
6,646,777	+		PFLU_RS29885	0.60	-1.8
6,646,777	+		PFLU_RS29885	0.60	-1.8
6,646,777	+		PFLU_RS29885	0.60	-0.2
6,646,777	+		PFLU_RS29885	0.60	-0.1
6,646,777	+		PFLU_RS29885	0.60	-2.3
6,646,778	-		PFLU_RS29885	0.60	-1.4
6,646,778	-		PFLU_RS29885	0.60	-2.0
6,646,778	-		PFLU_RS29885	0.60	-2.1
6,646,778	-		PFLU_RS29885	0.60	-0.3
6,646,778	-		PFLU_RS29885	0.60	-3.6
6,646,778	-		PFLU_RS29885	0.60	-2.8
6,646,831	+		PFLU_RS29885	0.65	-1.9
6,646,831	+		PFLU_RS29885	0.65	-1.5
6,646,831	+		PFLU_RS29885	0.65	-1.5
6,646,831	+		PFLU_RS29885	0.65	-1.7
6,646,832	-		PFLU_RS29885	0.65	-3.5
6,646,832	-		PFLU_RS29885	0.65	-1.6
6,646,832	-		PFLU_RS29885	0.65	-2.5
6,646,904	+		PFLU_RS29885	0.73	-1.8
6,646,904	+		PFLU_RS29885	0.73	-1.0
6,646,904	+		PFLU_RS29885	0.73	-1.3
6,646,905	-		PFLU_RS29885	0.73	-0.8
6,646,905	-		PFLU_RS29885	0.73	-0.4
6,646,905	-		PFLU_RS29885	0.73	-2.0
6,646,905	-		PFLU_RS29885	0.73	-1.7
6,647,160	+				-0.8
6,647,161	-				-1.1
6,647,318	-				-0.3
6,647,318	-				-1.2
6,647,326	+				-0.5
6,647,327	-				-0.9
6,647,327	-				-0.2
6,647,369	+				-2.1
6,647,369	+				+0.3
6,647,369	+				+0.6
6,647,369	+				+0.2
6,647,369	+				+0.8
6,647,369	+				+1.1
6,647,370	-				-0.0
6,647,370	-				+0.4
6,647,370	-				+0.3
6,647,370	-				+1.0
6,647,370	-				-0.2
6,647,370	-				-0.7
6,647,397	-				+0.8
6,647,397	-				-1.4
6,647,397	-				-1.0
6,647,397	-				+1.5
6,647,397	-				-0.1
6,647,439	+				-1.2
6,647,439	+				+0.2
6,647,439	+				-0.8
6,647,439	+				+0.6
6,647,440	-				-1.9
6,647,440	-				+0.7
6,647,440	-				+0.3
6,647,440	-				-0.7
6,647,440	-				+0.2
6,647,440	-				-2.2
6,647,455	+				+0.4
6,647,455	+				+0.4
6,647,456	-				+0.1
6,647,510	+				-0.0
6,647,510	+				-1.6
6,647,510	+				+0.4
6,647,510	+				-0.3
6,647,510	+				-0.4
6,647,510	+				+0.0
6,647,510	+				+0.1
6,647,510	+				+1.8
6,647,510	+				+0.7
6,647,510	+				-1.0
6,647,510	+				+0.5
6,647,511	-				+0.2
6,647,511	-				+1.4
6,647,511	-				+0.1
6,647,511	-				-0.1
6,647,511	-				-1.7
6,647,511	-				-0.0
6,647,511	-				-0.1
6,647,511	-				+0.1
6,647,511	-				+0.1
6,647,683	+		PFLU_RS29890	0.19	-0.9
6,647,683	+		PFLU_RS29890	0.19	+0.0
6,647,683	+		PFLU_RS29890	0.19	+1.5
6,647,683	+		PFLU_RS29890	0.19	+0.7
6,647,683	+		PFLU_RS29890	0.19	+0.7
6,647,683	+		PFLU_RS29890	0.19	-0.3
6,647,684	-		PFLU_RS29890	0.19	-2.1
6,647,684	-		PFLU_RS29890	0.19	-1.1
6,647,684	-		PFLU_RS29890	0.19	-0.2
6,647,684	-		PFLU_RS29890	0.19	+0.1
6,647,684	-		PFLU_RS29890	0.19	+0.6
6,647,905	+		PFLU_RS29890	0.45	-0.1
6,647,905	+		PFLU_RS29890	0.45	-0.2
6,647,905	+		PFLU_RS29890	0.45	-0.3
6,647,905	+		PFLU_RS29890	0.45	+0.1
6,647,906	-		PFLU_RS29890	0.45	+0.3
6,647,906	-		PFLU_RS29890	0.45	+0.2
6,647,906	-		PFLU_RS29890	0.45	+0.0
6,647,983	+		PFLU_RS29890	0.54	-0.5
6,647,983	+		PFLU_RS29890	0.54	+1.0
6,647,983	+		PFLU_RS29890	0.54	+2.3
6,647,983	+		PFLU_RS29890	0.54	-0.9
6,647,983	+		PFLU_RS29890	0.54	-0.4
6,647,984	-		PFLU_RS29890	0.54	-0.6
6,647,984	-		PFLU_RS29890	0.54	-1.5
6,647,984	-		PFLU_RS29890	0.54	-0.1
6,647,984	-		PFLU_RS29890	0.54	+0.1
6,647,984	-		PFLU_RS29890	0.54	+1.3
6,647,984	-		PFLU_RS29890	0.54	-1.0
6,647,984	-		PFLU_RS29890	0.54	-0.9
6,647,984	-		PFLU_RS29890	0.54	-0.4
6,647,984	-		PFLU_RS29890	0.54	-2.1
6,647,984	-		PFLU_RS29890	0.54	+1.2
6,648,103	+		PFLU_RS29890	0.68	-0.3
6,648,103	+		PFLU_RS29890	0.68	-0.8
6,648,103	+		PFLU_RS29890	0.68	-0.5
6,648,104	-		PFLU_RS29890	0.68	+1.6
6,648,104	-		PFLU_RS29890	0.68	-1.9
6,648,104	-		PFLU_RS29890	0.68	-1.6
6,648,104	-		PFLU_RS29890	0.68	-1.3
6,648,104	-		PFLU_RS29890	0.68	-0.7