Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS20515

Experiment: Glucose (C) and Ammonium chloride (N); with MOPS; with PEG

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and Ammonium chloride (N); with MOPS; with PEG
4,618,557	+		PFLU_RS20510	0.27	-2.1
4,618,557	+		PFLU_RS20510	0.27	-1.3
4,618,558	-		PFLU_RS20510	0.27	-2.3
4,618,558	-		PFLU_RS20510	0.27	-3.8
4,619,022	+		PFLU_RS20510	0.65	-2.3
4,619,022	+		PFLU_RS20510	0.65	-0.9
4,619,022	+		PFLU_RS20510	0.65	-2.6
4,619,022	+		PFLU_RS20510	0.65	-1.9
4,619,022	+		PFLU_RS20510	0.65	-1.1
4,619,022	+		PFLU_RS20510	0.65	-2.1
4,619,023	-		PFLU_RS20510	0.65	-2.2
4,619,023	-		PFLU_RS20510	0.65	-4.5
4,619,023	-		PFLU_RS20510	0.65	-3.2
4,619,023	-		PFLU_RS20510	0.65	-3.0
4,619,023	-		PFLU_RS20510	0.65	-2.3
4,619,052	+		PFLU_RS20510	0.67	-3.1
4,619,052	+		PFLU_RS20510	0.67	+0.1
4,619,052	+		PFLU_RS20510	0.67	-1.6
4,619,052	+		PFLU_RS20510	0.67	-1.3
4,619,052	+		PFLU_RS20510	0.67	-2.1
4,619,053	-		PFLU_RS20510	0.67	-2.4
4,619,053	-		PFLU_RS20510	0.67	+0.4
4,619,053	-		PFLU_RS20510	0.67	-3.2
4,619,053	-		PFLU_RS20510	0.67	-1.3
4,619,236	+		PFLU_RS20510	0.83	-2.5
4,619,236	+		PFLU_RS20510	0.83	-0.9
4,619,236	+		PFLU_RS20510	0.83	-1.7
4,619,236	+		PFLU_RS20510	0.83	-3.2
4,619,236	+		PFLU_RS20510	0.83	-1.7
4,619,236	+		PFLU_RS20510	0.83	-2.2
4,619,236	+		PFLU_RS20510	0.83	-3.5
4,619,236	+		PFLU_RS20510	0.83	-2.4
4,619,236	+		PFLU_RS20510	0.83	+0.1
4,619,236	+		PFLU_RS20510	0.83	-3.5
4,619,236	+		PFLU_RS20510	0.83	-3.0
4,619,236	+		PFLU_RS20510	0.83	-2.3
4,619,236	+		PFLU_RS20510	0.83	-2.9
4,619,236	+		PFLU_RS20510	0.83	-1.7
4,619,236	+		PFLU_RS20510	0.83	-2.9
4,619,237	-		PFLU_RS20510	0.83	-3.9
4,619,237	-		PFLU_RS20510	0.83	-2.0
4,619,237	-		PFLU_RS20510	0.83	-2.2
4,619,237	-		PFLU_RS20510	0.83	-0.6
4,619,237	-		PFLU_RS20510	0.83	-2.6
4,619,237	-		PFLU_RS20510	0.83	-3.3
4,619,237	-		PFLU_RS20510	0.83	-3.0
4,619,237	-		PFLU_RS20510	0.83	-3.7
4,619,237	-		PFLU_RS20510	0.83	-1.4
4,619,237	-		PFLU_RS20510	0.83	-1.7
4,619,247	+		PFLU_RS20510	0.83	-1.7
4,619,247	+		PFLU_RS20510	0.83	-2.1
4,619,247	+		PFLU_RS20510	0.83	-2.0
4,619,247	+		PFLU_RS20510	0.83	-2.0
4,619,247	+		PFLU_RS20510	0.83	-2.2
4,619,248	-		PFLU_RS20510	0.84	-4.1
4,619,248	-		PFLU_RS20510	0.84	-1.9
4,619,248	-		PFLU_RS20510	0.84	-1.4
4,619,248	-		PFLU_RS20510	0.84	-4.0
4,619,310	+		PFLU_RS20510	0.89	-1.9
4,619,310	+		PFLU_RS20510	0.89	-2.1
4,619,310	+		PFLU_RS20510	0.89	-3.8
4,619,310	+		PFLU_RS20510	0.89	-1.7
4,619,310	+		PFLU_RS20510	0.89	-2.7
4,619,310	+		PFLU_RS20510	0.89	-1.9
4,619,310	+		PFLU_RS20510	0.89	-2.5
4,619,310	+		PFLU_RS20510	0.89	-2.5
4,619,310	+		PFLU_RS20510	0.89	-2.7
4,619,310	+		PFLU_RS20510	0.89	-3.9
4,619,310	+		PFLU_RS20510	0.89	-3.2
4,619,310	+		PFLU_RS20510	0.89	-3.1
4,619,310	+		PFLU_RS20510	0.89	-0.6
4,619,310	+		PFLU_RS20510	0.89	-2.8
4,619,310	+		PFLU_RS20510	0.89	-1.6
4,619,310	+		PFLU_RS20510	0.89	-1.1
4,619,310	+		PFLU_RS20510	0.89	-3.5
4,619,310	+		PFLU_RS20510	0.89	-3.5
4,619,310	+		PFLU_RS20510	0.89	+0.1
4,619,310	+		PFLU_RS20510	0.89	-3.1
4,619,310	+		PFLU_RS20510	0.89	-0.3
4,619,310	+		PFLU_RS20510	0.89	-1.4
4,619,310	+		PFLU_RS20510	0.89	-3.5
4,619,310	+		PFLU_RS20510	0.89	-2.9
4,619,310	+		PFLU_RS20510	0.89	-1.6
4,619,310	+		PFLU_RS20510	0.89	-1.7
4,619,310	+		PFLU_RS20510	0.89	+0.7
4,619,310	+		PFLU_RS20510	0.89	-1.9
4,619,310	+		PFLU_RS20510	0.89	-2.8
4,619,310	+		PFLU_RS20510	0.89	-1.4
4,619,311	-		PFLU_RS20510	0.89	-2.4
4,619,311	-		PFLU_RS20510	0.89	-3.4
4,619,311	-		PFLU_RS20510	0.89	-2.4
4,619,311	-		PFLU_RS20510	0.89	-2.2
4,619,311	-		PFLU_RS20510	0.89	-1.6
4,619,311	-		PFLU_RS20510	0.89	-1.3
4,619,311	-		PFLU_RS20510	0.89	-1.9
4,619,311	-		PFLU_RS20510	0.89	-2.9
4,619,311	-		PFLU_RS20510	0.89	-1.9
4,619,311	-		PFLU_RS20510	0.89	-3.3
4,619,311	-		PFLU_RS20510	0.89	-1.9
4,619,311	-		PFLU_RS20510	0.89	-0.6
4,619,311	-		PFLU_RS20510	0.89	-3.1
4,619,396	+				-2.5
4,619,396	+				-3.6
4,619,396	+				-1.3
4,619,396	+				-2.6
4,619,396	+				-4.4
4,619,397	-				-0.6
4,619,397	-				-3.4
4,619,397	-				-3.7
4,619,459	+				-2.9
4,619,471	+				-0.5
4,619,471	+				+0.5
4,619,471	+				+1.0
4,619,471	+				+0.7
4,619,475	+				-1.1
4,619,475	+				-0.1
4,619,475	+				-0.7
4,619,475	+				+0.2
4,619,475	+				-1.8
4,619,475	+				+1.1
4,619,475	+				-0.5
4,619,475	+				-1.4
4,619,475	+				-0.5
4,619,475	+				-2.1
4,619,475	+				-0.1
4,619,475	+				-0.9
4,619,476	-				-0.4
4,619,476	-				-0.5
4,619,476	-				+0.3
4,619,476	-				-0.2
4,619,476	-				-0.4
4,619,476	-				-0.3
4,619,476	-				-0.9
4,619,476	-				-0.9
4,619,476	-				-0.4
4,619,480	+				+0.8
4,619,480	+				+0.7
4,619,480	+				+2.2
4,619,481	-				+0.7
4,619,522	+				+1.0
4,619,522	+				+0.1
4,619,522	+				-0.4
4,619,522	+				+0.4
4,619,522	+				-0.7
4,619,523	-				-1.7
4,619,523	-				-1.4
4,619,523	-				-0.7
4,619,523	-				-0.4
4,619,601	-				-2.1
4,619,627	+				+0.1
4,619,627	+				+1.7
4,619,627	+				-0.3
4,619,628	-				-1.4
4,619,628	-				-1.7
4,619,628	-				-0.9
4,619,628	-				-1.1
4,619,628	-				-1.3
4,619,715	-		PFLU_RS20515	0.13	-2.1
4,619,715	-		PFLU_RS20515	0.13	-1.6
4,619,807	+		PFLU_RS20515	0.20	-1.7
4,619,808	-		PFLU_RS20515	0.20	-1.1
4,619,808	-		PFLU_RS20515	0.20	-1.1
4,619,808	-		PFLU_RS20515	0.20	-0.3
4,619,849	+		PFLU_RS20515	0.22	+1.7
4,619,849	+		PFLU_RS20515	0.22	+0.7
4,619,850	-		PFLU_RS20515	0.22	-1.4
4,619,850	-		PFLU_RS20515	0.22	-1.4
4,619,850	-		PFLU_RS20515	0.22	-0.0
4,619,850	-		PFLU_RS20515	0.22	-1.4
4,620,035	+		PFLU_RS20515	0.35	-0.9
4,620,035	+		PFLU_RS20515	0.35	+0.7
4,620,036	-		PFLU_RS20515	0.35	-1.3
4,620,206	+		PFLU_RS20515	0.46	+0.1
4,620,206	+		PFLU_RS20515	0.46	+0.7
4,620,207	-		PFLU_RS20515	0.46	-0.6
4,620,248	+		PFLU_RS20515	0.49	-0.6
4,620,329	+		PFLU_RS20515	0.54	-0.9
4,620,329	+		PFLU_RS20515	0.54	+0.1
4,620,329	+		PFLU_RS20515	0.54	-1.1
4,620,329	+		PFLU_RS20515	0.54	-1.3
4,620,330	-		PFLU_RS20515	0.54	+0.1
4,620,330	-		PFLU_RS20515	0.54	-2.6
4,620,330	-		PFLU_RS20515	0.54	+1.7
4,620,330	-		PFLU_RS20515	0.54	-0.3
4,620,330	-		PFLU_RS20515	0.54	-1.3
4,620,410	+		PFLU_RS20515	0.60	+0.1
4,620,410	+		PFLU_RS20515	0.60	-1.3
4,620,411	-		PFLU_RS20515	0.60	-1.9
4,620,411	-		PFLU_RS20515	0.60	-2.2
4,620,411	-		PFLU_RS20515	0.60	-1.7
4,620,411	-		PFLU_RS20515	0.60	-0.3
4,620,674	+		PFLU_RS20515	0.77	-1.7
4,620,753	-		PFLU_RS20515	0.82	-1.6
4,620,865	+		PFLU_RS20515	0.90	-0.9
4,620,866	-		PFLU_RS20515	0.90	-1.1
4,620,866	-		PFLU_RS20515	0.90	-1.6
4,620,965	+				-0.9
4,620,965	+				-1.4
4,620,966	-				-0.7
4,620,966	-				-0.3
4,620,966	-				+0.7
4,620,966	-				-0.3
4,620,966	-				-1.4
4,621,032	-				-0.1
4,621,032	-				-2.7
4,621,032	-				-0.3
4,621,032	-				-1.4
4,621,032	-				-0.9
4,621,035	+				-1.3
4,621,035	+				-0.6
4,621,036	-				-0.4
4,621,036	-				-0.3
4,621,060	+				-0.6
4,621,060	+				+0.3
4,621,061	-				+0.7
4,621,061	-				-0.3
4,621,061	-				-0.0
4,621,061	-				-0.5
4,621,061	-				-0.9
4,621,080	+				-1.3
4,621,344	+		PFLU_RS20520	0.51	-1.3
4,621,344	+		PFLU_RS20520	0.51	+1.5
4,621,344	+		PFLU_RS20520	0.51	-0.5
4,621,344	+		PFLU_RS20520	0.51	-0.7
4,621,344	+		PFLU_RS20520	0.51	+0.7
4,621,344	+		PFLU_RS20520	0.51	-1.7
4,621,344	+		PFLU_RS20520	0.51	-1.4
4,621,344	+		PFLU_RS20520	0.51	+0.3
4,621,344	+		PFLU_RS20520	0.51	+2.3
4,621,345	-		PFLU_RS20520	0.51	-0.3
4,621,345	-		PFLU_RS20520	0.51	+0.7
4,621,345	-		PFLU_RS20520	0.51	-0.7
4,621,345	-		PFLU_RS20520	0.51	+0.4
4,621,345	-		PFLU_RS20520	0.51	+0.7
4,621,345	-		PFLU_RS20520	0.51	+0.1
4,621,345	-		PFLU_RS20520	0.51	-0.6
4,621,345	-		PFLU_RS20520	0.51	+1.7
4,621,345	-		PFLU_RS20520	0.51	+0.4
4,621,345	-		PFLU_RS20520	0.51	-0.8
4,621,345	-		PFLU_RS20520	0.51	-0.0
4,621,345	-		PFLU_RS20520	0.51	-1.7
4,621,345	-		PFLU_RS20520	0.51	+0.1
4,621,345	-		PFLU_RS20520	0.51	+1.7
4,621,345	-		PFLU_RS20520	0.51	-1.6
4,621,345	-		PFLU_RS20520	0.51	-0.3
4,621,345	-		PFLU_RS20520	0.51	+0.4
4,621,345	-		PFLU_RS20520	0.51	-1.1
4,621,358	+		PFLU_RS20520	0.54	+0.7
4,621,358	+		PFLU_RS20520	0.54	-0.3
4,621,358	+		PFLU_RS20520	0.54	-0.6
4,621,359	-		PFLU_RS20520	0.54	-0.9
4,621,359	-		PFLU_RS20520	0.54	-0.9
4,621,363	+		PFLU_RS20520	0.54	-1.4
4,621,363	+		PFLU_RS20520	0.54	-1.7
4,621,363	+		PFLU_RS20520	0.54	-0.7
4,621,363	+		PFLU_RS20520	0.54	-0.1
4,621,363	+		PFLU_RS20520	0.54	+0.4
4,621,363	+		PFLU_RS20520	0.54	-0.9
4,621,363	+		PFLU_RS20520	0.54	-0.6
4,621,364	-		PFLU_RS20520	0.55	-0.6
4,621,364	-		PFLU_RS20520	0.55	-0.9
4,621,364	-		PFLU_RS20520	0.55	+0.4
4,621,364	-		PFLU_RS20520	0.55	+0.6
4,621,364	-		PFLU_RS20520	0.55	-0.6
4,621,364	-		PFLU_RS20520	0.55	-2.0
4,621,364	-		PFLU_RS20520	0.55	-1.4
4,621,364	-		PFLU_RS20520	0.55	-1.1
4,621,447	+		PFLU_RS20520	0.70	-0.9
4,621,447	+		PFLU_RS20520	0.70	-0.1
4,621,448	-		PFLU_RS20520	0.70	-0.3
4,621,448	-		PFLU_RS20520	0.70	-0.8
4,621,448	-		PFLU_RS20520	0.70	+1.1
4,621,459	+		PFLU_RS20520	0.72	-1.6
4,621,459	+		PFLU_RS20520	0.72	-1.4
4,621,459	+		PFLU_RS20520	0.72	+0.7
4,621,460	-		PFLU_RS20520	0.72	-0.5
4,621,460	-		PFLU_RS20520	0.72	+0.1
4,621,491	+		PFLU_RS20520	0.77	+0.1
4,621,492	-		PFLU_RS20520	0.78	-0.1
4,621,536	+		PFLU_RS20520	0.85	+0.5
4,621,537	-		PFLU_RS20520	0.86	+1.7
4,621,537	-		PFLU_RS20520	0.86	-0.7
4,621,551	+		PFLU_RS20520	0.88	-0.6
4,621,551	+		PFLU_RS20520	0.88	-2.0
4,621,607	+				+0.1
4,621,607	+				-1.4
4,621,607	+				-0.1
4,621,607	+				-1.0
4,621,607	+				-0.6
4,621,608	-				+0.6
4,621,608	-				-0.6
4,621,608	-				+0.1
4,621,608	-				-2.1
4,621,608	-				-0.7
4,621,608	-				-0.8
4,621,651	+				-3.0
4,621,652	-				-0.8
4,621,742	+				+1.2
4,621,743	-				+0.4
4,621,743	-				-1.5
4,621,743	-				-0.0
4,621,765	+				+1.0
4,621,765	+				-0.8
4,621,765	+				-0.6
4,621,766	-				+0.8
4,621,766	-				-0.2
4,621,766	-				+0.1
4,621,766	-				-0.0
4,621,792	+				+1.1
4,621,792	+				+0.4
4,621,792	+				-1.3
4,621,792	+				+1.7
4,621,792	+				+0.9
4,621,792	+				-1.3
4,621,793	-				-0.6
4,621,793	-				-0.4
4,622,015	-		PFLU_RS20525	0.21	+1.7
4,622,016	+		PFLU_RS20525	0.21	-0.0
4,622,016	+		PFLU_RS20525	0.21	-0.4
4,622,016	+		PFLU_RS20525	0.21	+2.1
4,622,016	+		PFLU_RS20525	0.21	+1.7
4,622,016	+		PFLU_RS20525	0.21	+1.1
4,622,016	+		PFLU_RS20525	0.21	+0.6
4,622,016	+		PFLU_RS20525	0.21	+2.7
4,622,017	-		PFLU_RS20525	0.22	+1.1
4,622,017	-		PFLU_RS20525	0.22	-2.7
4,622,017	-		PFLU_RS20525	0.22	+0.9
4,622,017	-		PFLU_RS20525	0.22	-0.9
4,622,017	-		PFLU_RS20525	0.22	-0.0
4,622,017	-		PFLU_RS20525	0.22	-0.9