Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS16300

Experiment: Glucose (C) and Ammonium chloride (N); with MOPS; with PEG

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and Ammonium chloride (N); with MOPS; with PEG
3,699,657	+				-0.5
3,699,676	-				+2.9
3,699,750	+				-0.4
3,699,750	+				-1.0
3,699,750	+				+0.3
3,699,750	+				+2.0
3,699,751	-				+0.2
3,699,784	+				+0.0
3,699,785	-				+1.3
3,699,808	+				-2.0
3,699,808	+				+0.3
3,699,808	+				+0.3
3,699,808	+				+0.5
3,699,809	-				+0.6
3,699,830	-				-0.7
3,699,865	+				-0.6
3,699,866	-				-0.3
3,699,866	-				-1.0
3,699,866	-				-0.5
3,699,887	+				+1.1
3,699,888	-				-0.7
3,699,896	+				-0.4
3,699,896	+				+0.6
3,699,897	-				-1.0
3,699,897	-				-1.3
3,699,940	+				-0.1
3,699,954	+		PFLU_RS16295	0.11	-0.4
3,699,954	+		PFLU_RS16295	0.11	-0.5
3,699,954	+		PFLU_RS16295	0.11	-0.3
3,699,954	+		PFLU_RS16295	0.11	-0.1
3,699,954	+		PFLU_RS16295	0.11	-0.4
3,699,954	+		PFLU_RS16295	0.11	-0.2
3,699,955	-		PFLU_RS16295	0.11	-2.3
3,699,955	-		PFLU_RS16295	0.11	+2.9
3,699,955	-		PFLU_RS16295	0.11	+1.6
3,699,955	-		PFLU_RS16295	0.11	-1.5
3,699,955	-		PFLU_RS16295	0.11	-0.2
3,700,010	+		PFLU_RS16295	0.19	+0.3
3,700,011	-		PFLU_RS16295	0.19	-0.8
3,700,019	+		PFLU_RS16295	0.20	-1.5
3,700,021	+		PFLU_RS16295	0.20	+1.1
3,700,021	+		PFLU_RS16295	0.20	+0.0
3,700,021	+		PFLU_RS16295	0.20	-0.7
3,700,021	+		PFLU_RS16295	0.20	-0.9
3,700,022	-		PFLU_RS16295	0.21	+1.3
3,700,022	-		PFLU_RS16295	0.21	+1.3
3,700,022	-		PFLU_RS16295	0.21	+0.3
3,700,022	-		PFLU_RS16295	0.21	+1.3
3,700,022	-		PFLU_RS16295	0.21	-0.3
3,700,091	+		PFLU_RS16295	0.30	-0.9
3,700,091	+		PFLU_RS16295	0.30	+0.0
3,700,092	-		PFLU_RS16295	0.30	-0.3
3,700,092	-		PFLU_RS16295	0.30	-1.0
3,700,129	-		PFLU_RS16295	0.35	+0.0
3,700,173	-		PFLU_RS16295	0.41	+1.3
3,700,173	-		PFLU_RS16295	0.41	+0.3
3,700,183	-		PFLU_RS16295	0.42	+2.1
3,700,289	+		PFLU_RS16295	0.57	-0.5
3,700,289	+		PFLU_RS16295	0.57	+0.2
3,700,290	-		PFLU_RS16295	0.57	-0.4
3,700,290	-		PFLU_RS16295	0.57	+2.3
3,700,290	-		PFLU_RS16295	0.57	+0.6
3,700,297	+		PFLU_RS16295	0.58	-0.9
3,700,297	+		PFLU_RS16295	0.58	-0.1
3,700,297	+		PFLU_RS16295	0.58	-1.3
3,700,298	-		PFLU_RS16295	0.58	+2.3
3,700,298	-		PFLU_RS16295	0.58	+0.0
3,700,298	-		PFLU_RS16295	0.58	+0.8
3,700,298	-		PFLU_RS16295	0.58	+1.3
3,700,298	-		PFLU_RS16295	0.58	+1.3
3,700,298	-		PFLU_RS16295	0.58	-2.4
3,700,298	-		PFLU_RS16295	0.58	-1.5
3,700,302	+		PFLU_RS16295	0.58	-0.3
3,700,303	-		PFLU_RS16295	0.58	-0.7
3,700,303	-		PFLU_RS16295	0.58	-0.3
3,700,328	+		PFLU_RS16295	0.62	+0.1
3,700,329	-		PFLU_RS16295	0.62	-0.7
3,700,329	-		PFLU_RS16295	0.62	-1.3
3,700,329	-		PFLU_RS16295	0.62	+0.3
3,700,329	-		PFLU_RS16295	0.62	-1.5
3,700,343	+		PFLU_RS16295	0.64	+0.9
3,700,344	-		PFLU_RS16295	0.64	+0.2
3,700,347	+		PFLU_RS16295	0.64	+1.9
3,700,424	+		PFLU_RS16295	0.75	+0.3
3,700,425	-		PFLU_RS16295	0.75	-1.0
3,700,462	+		PFLU_RS16295	0.80	+0.5
3,700,462	+		PFLU_RS16295	0.80	+0.2
3,700,465	+		PFLU_RS16295	0.80	-0.2
3,700,466	-		PFLU_RS16295	0.80	-0.1
3,700,466	-		PFLU_RS16295	0.80	-1.7
3,700,474	+		PFLU_RS16295	0.82	+1.3
3,700,475	-		PFLU_RS16295	0.82	-0.8
3,700,587	+				+0.1
3,700,604	+				-0.4
3,700,604	+				-1.5
3,700,604	+				-0.0
3,700,703	-				+0.6
3,700,899	+		PFLU_RS16300	0.44	-1.5
3,701,026	-		PFLU_RS16300	0.67	+0.3
3,701,053	+		PFLU_RS16300	0.72	-0.5
3,701,056	+		PFLU_RS16300	0.72	-1.5
3,701,056	+		PFLU_RS16300	0.72	-0.3
3,701,056	+		PFLU_RS16300	0.72	-0.5
3,701,057	-		PFLU_RS16300	0.73	-0.7
3,701,092	+		PFLU_RS16300	0.79	-1.5
3,701,092	+		PFLU_RS16300	0.79	-0.1
3,701,171	-				+0.3
3,701,177	+				-2.1
3,701,178	-				+1.3
3,701,178	-				-0.0
3,701,178	-				+2.3
3,701,179	+				+0.2
3,701,209	-				+0.7
3,701,214	+				-0.7
3,701,234	+				-0.5
3,701,254	+				+1.3
3,701,255	-				+0.3
3,701,274	+		PFLU_RS16305	0.10	-1.5
3,701,274	+		PFLU_RS16305	0.10	-0.1
3,701,274	+		PFLU_RS16305	0.10	-0.0
3,701,275	-		PFLU_RS16305	0.10	-0.3
3,701,276	+		PFLU_RS16305	0.10	+0.1
3,701,276	+		PFLU_RS16305	0.10	-0.5
3,701,277	-		PFLU_RS16305	0.11	+0.3
3,701,320	-		PFLU_RS16305	0.21	-0.3
3,701,322	+		PFLU_RS16305	0.22	-1.1
3,701,322	+		PFLU_RS16305	0.22	-0.9
3,701,322	+		PFLU_RS16305	0.22	-2.4
3,701,323	-		PFLU_RS16305	0.22	+0.5
3,701,323	-		PFLU_RS16305	0.22	-1.3
3,701,323	-		PFLU_RS16305	0.22	+1.0
3,701,332	-		PFLU_RS16305	0.24	+0.7
3,701,438	+		PFLU_RS16305	0.50	+2.3
3,701,438	+		PFLU_RS16305	0.50	-0.7
3,701,439	-		PFLU_RS16305	0.50	+1.6
3,701,439	-		PFLU_RS16305	0.50	-1.3
3,701,451	+		PFLU_RS16305	0.53	-0.8
3,701,451	+		PFLU_RS16305	0.53	-1.0
3,701,452	-		PFLU_RS16305	0.53	+0.8
3,701,452	-		PFLU_RS16305	0.53	-0.8
3,701,481	+		PFLU_RS16305	0.60	-0.1
3,701,481	+		PFLU_RS16305	0.60	-0.8
3,701,487	-		PFLU_RS16305	0.62	+1.6
3,701,487	-		PFLU_RS16305	0.62	+1.8
3,701,487	-		PFLU_RS16305	0.62	-0.8
3,701,508	+		PFLU_RS16305	0.67	+0.0
3,701,509	-		PFLU_RS16305	0.67	-0.3
3,701,509	-		PFLU_RS16305	0.67	-0.1
3,701,564	+		PFLU_RS16305	0.81	-1.3
3,701,569	+		PFLU_RS16305	0.82	+0.9
3,701,569	+		PFLU_RS16305	0.82	+2.0
3,701,569	+		PFLU_RS16305	0.82	-2.0
3,701,569	+		PFLU_RS16305	0.82	+0.5
3,701,569	+		PFLU_RS16305	0.82	-0.8
3,701,569	+		PFLU_RS16305	0.82	-0.5
3,701,569	+		PFLU_RS16305	0.82	-1.4
3,701,569	+		PFLU_RS16305	0.82	-0.3
3,701,569	+		PFLU_RS16305	0.82	-0.4
3,701,569	+		PFLU_RS16305	0.82	+1.3
3,701,569	+		PFLU_RS16305	0.82	-1.3
3,701,569	+		PFLU_RS16305	0.82	-1.4
3,701,569	+		PFLU_RS16305	0.82	+0.3
3,701,569	+		PFLU_RS16305	0.82	+1.3
3,701,569	+		PFLU_RS16305	0.82	+0.2
3,701,569	+		PFLU_RS16305	0.82	+1.2
3,701,569	+		PFLU_RS16305	0.82	+1.1
3,701,569	+		PFLU_RS16305	0.82	-1.7
3,701,569	+		PFLU_RS16305	0.82	+1.0
3,701,570	-		PFLU_RS16305	0.82	-1.5
3,701,570	-		PFLU_RS16305	0.82	+2.3
3,701,570	-		PFLU_RS16305	0.82	+0.6
3,701,570	-		PFLU_RS16305	0.82	-1.7
3,701,570	-		PFLU_RS16305	0.82	-1.3
3,701,570	-		PFLU_RS16305	0.82	+1.1
3,701,570	-		PFLU_RS16305	0.82	+1.1
3,701,570	-		PFLU_RS16305	0.82	-0.3
3,701,570	-		PFLU_RS16305	0.82	+0.5
3,701,570	-		PFLU_RS16305	0.82	+1.8
3,701,570	-		PFLU_RS16305	0.82	-0.5
3,701,570	-		PFLU_RS16305	0.82	-1.8
3,701,570	-		PFLU_RS16305	0.82	+0.2
3,701,570	-		PFLU_RS16305	0.82	-0.7
3,701,570	-		PFLU_RS16305	0.82	+2.7
3,701,570	-		PFLU_RS16305	0.82	-0.6
3,701,570	-		PFLU_RS16305	0.82	-1.3
3,701,570	-		PFLU_RS16305	0.82	+0.3
3,701,570	-		PFLU_RS16305	0.82	-0.3
3,701,570	-		PFLU_RS16305	0.82	+0.3
3,701,570	-		PFLU_RS16305	0.82	-0.3
3,701,570	-		PFLU_RS16305	0.82	+0.1
3,701,570	-		PFLU_RS16305	0.82	+0.3
3,701,570	-		PFLU_RS16305	0.82	-1.8
3,701,570	-		PFLU_RS16305	0.82	-0.8
3,701,570	-		PFLU_RS16305	0.82	+2.3
3,701,570	-		PFLU_RS16305	0.82	-1.9
3,701,571	+		PFLU_RS16305	0.82	+1.2
3,701,571	+		PFLU_RS16305	0.82	+2.3
3,701,571	+		PFLU_RS16305	0.82	+1.7
3,701,571	+		PFLU_RS16305	0.82	-0.7
3,701,571	+		PFLU_RS16305	0.82	+0.3
3,701,571	+		PFLU_RS16305	0.82	-1.7
3,701,571	+		PFLU_RS16305	0.82	-0.3
3,701,571	+		PFLU_RS16305	0.82	-0.4
3,701,571	+		PFLU_RS16305	0.82	+0.3
3,701,571	+		PFLU_RS16305	0.82	-1.0
3,701,571	+		PFLU_RS16305	0.82	-1.3
3,701,571	+		PFLU_RS16305	0.82	+0.2
3,701,572	-		PFLU_RS16305	0.82	-1.3
3,701,572	-		PFLU_RS16305	0.82	+0.5
3,701,572	-		PFLU_RS16305	0.82	+0.2
3,701,572	-		PFLU_RS16305	0.82	+1.0
3,701,572	-		PFLU_RS16305	0.82	+0.2
3,701,572	-		PFLU_RS16305	0.82	-0.1
3,701,572	-		PFLU_RS16305	0.82	-0.7
3,701,572	-		PFLU_RS16305	0.82	-0.7
3,701,572	-		PFLU_RS16305	0.82	+0.0
3,701,572	-		PFLU_RS16305	0.82	-2.4
3,701,572	-		PFLU_RS16305	0.82	-0.6
3,701,572	-		PFLU_RS16305	0.82	-1.0
3,701,575	+		PFLU_RS16305	0.83	+0.3
3,701,575	+		PFLU_RS16305	0.83	+0.4
3,701,575	+		PFLU_RS16305	0.83	-1.0
3,701,575	+		PFLU_RS16305	0.83	+0.0
3,701,575	+		PFLU_RS16305	0.83	-0.7
3,701,575	+		PFLU_RS16305	0.83	-0.5
3,701,575	+		PFLU_RS16305	0.83	-0.9
3,701,575	+		PFLU_RS16305	0.83	+0.2
3,701,575	+		PFLU_RS16305	0.83	-0.3
3,701,575	+		PFLU_RS16305	0.83	+0.2
3,701,575	+		PFLU_RS16305	0.83	-1.4
3,701,575	+		PFLU_RS16305	0.83	+0.1
3,701,575	+		PFLU_RS16305	0.83	+1.3
3,701,575	+		PFLU_RS16305	0.83	+1.6
3,701,575	+		PFLU_RS16305	0.83	-0.7
3,701,576	-		PFLU_RS16305	0.83	-1.0
3,701,576	-		PFLU_RS16305	0.83	+3.3
3,701,576	-		PFLU_RS16305	0.83	-1.7
3,701,576	-		PFLU_RS16305	0.83	-0.2
3,701,594	+		PFLU_RS16305	0.88	-2.1
3,701,594	+		PFLU_RS16305	0.88	-0.7
3,701,595	-		PFLU_RS16305	0.88	+3.3
3,701,595	-		PFLU_RS16305	0.88	+1.1
3,701,595	-		PFLU_RS16305	0.88	+0.2
3,701,642	-				+4.3
3,701,774	+		PFLU_RS16310	0.28	+0.3
3,701,830	+		PFLU_RS16310	0.45	+0.7
3,701,831	-		PFLU_RS16310	0.46	-1.5
3,701,834	-		PFLU_RS16310	0.46	+1.3
3,701,948	+		PFLU_RS16310	0.81	+1.1
3,701,949	-		PFLU_RS16310	0.82	+0.1
3,702,015	+				-0.3
3,702,016	-				-1.6
3,702,079	-		PFLU_RS16315	0.12	+0.5
3,702,149	-		PFLU_RS16315	0.24	-0.4
3,702,172	+		PFLU_RS16315	0.27	-0.8