Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS24335

Experiment: Glucose (C) and Ammonium chloride (N); with MOPS; with PEG

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and Ammonium chloride (N); with MOPS; with PEG
5,447,544	+		PFLU_RS24330	0.59	-0.5
5,447,544	+		PFLU_RS24330	0.59	-1.2
5,447,544	+		PFLU_RS24330	0.59	-1.9
5,447,545	-		PFLU_RS24330	0.59	+1.2
5,447,545	-		PFLU_RS24330	0.59	+0.8
5,447,545	-		PFLU_RS24330	0.59	+0.8
5,447,545	-		PFLU_RS24330	0.59	-0.8
5,447,545	-		PFLU_RS24330	0.59	-1.8
5,447,622	+		PFLU_RS24330	0.63	-0.8
5,447,622	+		PFLU_RS24330	0.63	+0.2
5,447,622	+		PFLU_RS24330	0.63	-0.8
5,447,622	+		PFLU_RS24330	0.63	+0.8
5,447,622	+		PFLU_RS24330	0.63	+0.8
5,447,623	-		PFLU_RS24330	0.63	+0.2
5,447,623	-		PFLU_RS24330	0.63	-0.6
5,447,623	-		PFLU_RS24330	0.63	-0.8
5,447,649	+		PFLU_RS24330	0.65	+0.2
5,447,649	+		PFLU_RS24330	0.65	+0.8
5,447,650	-		PFLU_RS24330	0.65	+0.8
5,447,650	-		PFLU_RS24330	0.65	-1.0
5,447,741	-		PFLU_RS24330	0.70	+0.0
5,448,042	+		PFLU_RS24330	0.86	-0.2
5,448,043	-		PFLU_RS24330	0.86	-0.8
5,448,070	+		PFLU_RS24330	0.88	-2.1
5,448,070	+		PFLU_RS24330	0.88	-1.3
5,448,070	+		PFLU_RS24330	0.88	-2.4
5,448,070	+		PFLU_RS24330	0.88	+0.8
5,448,070	+		PFLU_RS24330	0.88	-0.2
5,448,071	-		PFLU_RS24330	0.88	-1.5
5,448,071	-		PFLU_RS24330	0.88	-1.5
5,448,071	-		PFLU_RS24330	0.88	-2.1
5,448,071	-		PFLU_RS24330	0.88	-0.8
5,448,071	-		PFLU_RS24330	0.88	+0.2
5,448,071	-		PFLU_RS24330	0.88	-0.8
5,448,072	+		PFLU_RS24330	0.88	+0.0
5,448,072	+		PFLU_RS24330	0.88	-1.0
5,448,072	+		PFLU_RS24330	0.88	+0.2
5,448,072	+		PFLU_RS24330	0.88	+0.8
5,448,072	+		PFLU_RS24330	0.88	-1.0
5,448,072	+		PFLU_RS24330	0.88	-0.8
5,448,072	+		PFLU_RS24330	0.88	-0.2
5,448,073	-		PFLU_RS24330	0.88	-0.8
5,448,073	-		PFLU_RS24330	0.88	-0.5
5,448,073	-		PFLU_RS24330	0.88	-2.7
5,448,073	-		PFLU_RS24330	0.88	+1.8
5,448,073	-		PFLU_RS24330	0.88	-1.0
5,448,225	+				-1.0
5,448,225	+				-1.2
5,448,225	+				+1.8
5,448,225	+				+0.8
5,448,226	-				-1.6
5,448,226	-				-1.2
5,448,226	-				-0.2
5,448,226	-				+0.8
5,448,296	+				-2.6
5,448,296	+				+0.8
5,448,296	+				-1.5
5,448,296	+				-1.5
5,448,296	+				-2.1
5,448,296	+				-0.5
5,448,296	+				-1.6
5,448,296	+				-0.8
5,448,296	+				+1.2
5,448,296	+				-3.5
5,448,296	+				+0.8
5,448,296	+				+0.8
5,448,296	+				-1.0
5,448,296	+				+0.5
5,448,297	-				-1.3
5,448,297	-				+0.8
5,448,297	-				-0.5
5,448,297	-				+0.2
5,448,297	-				-0.5
5,448,297	-				-1.9
5,448,297	-				-1.0
5,448,297	-				-3.4
5,448,297	-				-1.4
5,448,334	+				-1.2
5,448,334	+				-1.7
5,448,334	+				-1.3
5,448,334	+				-0.4
5,448,334	+				-2.1
5,448,334	+				-1.5
5,448,334	+				-1.8
5,448,334	+				-0.0
5,448,335	-				-2.3
5,448,335	-				-0.7
5,448,335	-				-1.4
5,448,335	-				-2.7
5,448,335	-				+0.6
5,448,335	-				+0.5
5,448,335	-				-2.0
5,448,335	-				-0.1
5,448,335	-				-0.5
5,448,335	-				+1.1
5,448,335	-				-0.5
5,448,416	+				-0.6
5,448,430	+				-0.2
5,448,430	+				-2.1
5,448,430	+				-1.0
5,448,471	-				-0.9
5,448,485	+				+0.4
5,448,526	-				-1.5
5,448,559	-				-0.8
5,448,559	-				-0.2
5,448,559	-				-0.9
5,448,577	+				-1.4
5,448,577	+				-1.6
5,448,577	+				-1.0
5,448,577	+				-0.6
5,448,577	+				-1.9
5,448,577	+				-0.2
5,448,577	+				-1.1
5,448,577	+				-1.7
5,448,577	+				-1.4
5,448,577	+				+0.7
5,448,577	+				-0.2
5,448,577	+				-1.3
5,448,577	+				+0.5
5,448,577	+				-0.3
5,448,577	+				+0.0
5,448,577	+				+0.7
5,448,577	+				-1.5
5,448,577	+				-0.3
5,448,578	-				-1.1
5,448,578	-				-1.1
5,448,578	-				+0.1
5,448,578	-				-0.5
5,448,578	-				-1.3
5,448,578	-				-1.4
5,448,578	-				-0.8
5,448,578	-				-0.3
5,448,578	-				-1.9
5,448,578	-				+1.1
5,448,578	-				-1.0
5,448,579	+				+1.8
5,448,580	-				-0.2
5,448,580	-				-0.8
5,448,589	+				-0.6
5,448,661	+		PFLU_RS24335	0.15	-1.5
5,448,661	+		PFLU_RS24335	0.15	-0.2
5,448,662	-		PFLU_RS24335	0.15	-0.6
5,448,662	-		PFLU_RS24335	0.15	-0.2
5,448,662	-		PFLU_RS24335	0.15	+0.4
5,448,671	+		PFLU_RS24335	0.16	-0.7
5,448,671	+		PFLU_RS24335	0.16	-1.1
5,448,671	+		PFLU_RS24335	0.16	-0.1
5,448,671	+		PFLU_RS24335	0.16	-1.6
5,448,671	+		PFLU_RS24335	0.16	-1.0
5,448,671	+		PFLU_RS24335	0.16	-1.1
5,448,671	+		PFLU_RS24335	0.16	-0.2
5,448,671	+		PFLU_RS24335	0.16	+1.3
5,448,671	+		PFLU_RS24335	0.16	-3.0
5,448,671	+		PFLU_RS24335	0.16	-1.9
5,448,671	+		PFLU_RS24335	0.16	-1.5
5,448,671	+		PFLU_RS24335	0.16	-0.3
5,448,671	+		PFLU_RS24335	0.16	-0.6
5,448,671	+		PFLU_RS24335	0.16	-0.8
5,448,671	+		PFLU_RS24335	0.16	-1.7
5,448,671	+		PFLU_RS24335	0.16	-0.1
5,448,671	+		PFLU_RS24335	0.16	-1.6
5,448,671	+		PFLU_RS24335	0.16	-1.1
5,448,671	+		PFLU_RS24335	0.16	-0.9
5,448,671	+		PFLU_RS24335	0.16	-2.5
5,448,671	+		PFLU_RS24335	0.16	-0.7
5,448,671	+		PFLU_RS24335	0.16	-1.3
5,448,671	+		PFLU_RS24335	0.16	-0.0
5,448,671	+		PFLU_RS24335	0.16	-1.0
5,448,671	+		PFLU_RS24335	0.16	-2.0
5,448,671	+		PFLU_RS24335	0.16	-1.6
5,448,671	+		PFLU_RS24335	0.16	-0.8
5,448,671	+		PFLU_RS24335	0.16	-0.5
5,448,671	+		PFLU_RS24335	0.16	+0.9
5,448,671	+		PFLU_RS24335	0.16	+0.4
5,448,671	+		PFLU_RS24335	0.16	-1.9
5,448,671	+		PFLU_RS24335	0.16	-0.0
5,448,671	+		PFLU_RS24335	0.16	-1.0
5,448,671	+		PFLU_RS24335	0.16	-2.5
5,448,671	+		PFLU_RS24335	0.16	-1.0
5,448,671	+		PFLU_RS24335	0.16	-0.6
5,448,671	+		PFLU_RS24335	0.16	-1.0
5,448,672	-		PFLU_RS24335	0.16	-1.5
5,448,672	-		PFLU_RS24335	0.16	-0.8
5,448,672	-		PFLU_RS24335	0.16	-0.1
5,448,672	-		PFLU_RS24335	0.16	-1.1
5,448,672	-		PFLU_RS24335	0.16	-0.5
5,448,672	-		PFLU_RS24335	0.16	-0.1
5,448,672	-		PFLU_RS24335	0.16	-1.5
5,448,672	-		PFLU_RS24335	0.16	-1.7
5,448,672	-		PFLU_RS24335	0.16	+0.2
5,448,672	-		PFLU_RS24335	0.16	-1.2
5,448,672	-		PFLU_RS24335	0.16	-1.3
5,448,672	-		PFLU_RS24335	0.16	-0.5
5,448,672	-		PFLU_RS24335	0.16	+1.0
5,448,672	-		PFLU_RS24335	0.16	-1.7
5,448,672	-		PFLU_RS24335	0.16	-1.3
5,448,672	-		PFLU_RS24335	0.16	+2.4
5,448,672	-		PFLU_RS24335	0.16	+0.8
5,448,672	-		PFLU_RS24335	0.16	-0.9
5,448,672	-		PFLU_RS24335	0.16	+0.2
5,448,672	-		PFLU_RS24335	0.16	-0.8
5,448,672	-		PFLU_RS24335	0.16	-2.3
5,448,672	-		PFLU_RS24335	0.16	+0.7
5,448,672	-		PFLU_RS24335	0.16	+0.2
5,448,672	-		PFLU_RS24335	0.16	-0.3
5,448,672	-		PFLU_RS24335	0.16	-0.9
5,448,672	-		PFLU_RS24335	0.16	+0.2
5,448,672	-		PFLU_RS24335	0.16	+0.7
5,448,672	-		PFLU_RS24335	0.16	-0.5
5,448,672	-		PFLU_RS24335	0.16	-0.4
5,448,672	-		PFLU_RS24335	0.16	-0.5
5,448,672	-		PFLU_RS24335	0.16	-2.0
5,448,672	-		PFLU_RS24335	0.16	-0.5
5,448,672	-		PFLU_RS24335	0.16	-0.1
5,448,672	-		PFLU_RS24335	0.16	-1.6
5,448,672	-		PFLU_RS24335	0.16	-2.7
5,448,672	-		PFLU_RS24335	0.16	+0.2
5,448,672	-		PFLU_RS24335	0.16	-0.7
5,448,672	-		PFLU_RS24335	0.16	-0.2
5,448,672	-		PFLU_RS24335	0.16	-1.5
5,448,849	+		PFLU_RS24335	0.33	-1.0
5,448,849	+		PFLU_RS24335	0.33	-2.1
5,448,849	+		PFLU_RS24335	0.33	+0.3
5,448,849	+		PFLU_RS24335	0.33	-0.6
5,448,849	+		PFLU_RS24335	0.33	-1.3
5,448,850	-		PFLU_RS24335	0.34	-1.6
5,448,850	-		PFLU_RS24335	0.34	+0.6
5,448,850	-		PFLU_RS24335	0.34	-1.9
5,448,853	-		PFLU_RS24335	0.34	-1.3
5,448,853	-		PFLU_RS24335	0.34	-0.8
5,448,916	+		PFLU_RS24335	0.40	-1.0
5,448,916	+		PFLU_RS24335	0.40	-0.6
5,448,916	+		PFLU_RS24335	0.40	-2.7
5,448,917	-		PFLU_RS24335	0.40	-1.0
5,448,978	+		PFLU_RS24335	0.46	-0.7
5,448,978	+		PFLU_RS24335	0.46	-1.0
5,448,979	-		PFLU_RS24335	0.46	+0.1
5,449,060	+		PFLU_RS24335	0.54	-0.9
5,449,060	+		PFLU_RS24335	0.54	-1.2
5,449,060	+		PFLU_RS24335	0.54	-1.7
5,449,060	+		PFLU_RS24335	0.54	-1.6
5,449,061	-		PFLU_RS24335	0.55	-1.8
5,449,061	-		PFLU_RS24335	0.55	-3.1
5,449,061	-		PFLU_RS24335	0.55	-1.5
5,449,090	+		PFLU_RS24335	0.57	-3.8
5,449,091	-		PFLU_RS24335	0.58	-1.4
5,449,336	+		PFLU_RS24335	0.82	+1.2
5,449,336	+		PFLU_RS24335	0.82	-1.3
5,449,336	+		PFLU_RS24335	0.82	-3.0
5,449,337	-		PFLU_RS24335	0.82	-1.6
5,449,337	-		PFLU_RS24335	0.82	+1.4
5,449,337	-		PFLU_RS24335	0.82	-2.0
5,449,337	-		PFLU_RS24335	0.82	-2.6
5,449,375	-		PFLU_RS24335	0.86	-0.3
5,449,375	-		PFLU_RS24335	0.86	+0.5
5,449,447	+				-0.9
5,449,448	-				-1.0
5,449,448	-				-0.2
5,449,448	-				-1.2
5,449,476	+				-0.5
5,449,476	+				-1.5
5,449,476	+				-1.7
5,449,476	+				-1.2
5,449,477	-				-0.2
5,449,477	-				-0.2
5,449,477	-				+0.5
5,449,485	+				-0.3
5,449,485	+				-0.7
5,449,514	-				+0.7
5,449,514	-				-0.4
5,449,514	-				-0.4
5,449,514	-				+0.6
5,449,589	+				-0.2
5,449,589	+				-0.4
5,449,589	+				+0.7
5,449,589	+				-1.3
5,449,615	+				+0.7
5,449,615	+				-0.4
5,449,615	+				-1.7
5,449,615	+				+0.6
5,449,616	-				-1.0
5,449,616	-				-0.1
5,449,623	-				+0.5
5,449,628	+				-1.6
5,449,628	+				-0.5
5,449,647	+				-1.4
5,449,648	-				+1.0
5,449,648	-				-0.3
5,449,683	+				-1.1
5,449,683	+				-1.6
5,449,683	+				-0.1
5,449,684	-				+1.4
5,449,684	-				+0.2
5,449,768	+		PFLU_RS24340	0.22	-0.3
5,449,768	+		PFLU_RS24340	0.22	+0.4
5,449,768	+		PFLU_RS24340	0.22	+0.1
5,449,768	+		PFLU_RS24340	0.22	-1.9
5,449,768	+		PFLU_RS24340	0.22	-1.2
5,449,768	+		PFLU_RS24340	0.22	-0.2
5,449,769	-		PFLU_RS24340	0.22	-0.1
5,449,769	-		PFLU_RS24340	0.22	+0.2
5,449,769	-		PFLU_RS24340	0.22	+0.6
5,449,769	-		PFLU_RS24340	0.22	-0.9
5,449,829	-		PFLU_RS24340	0.34	+0.5
5,449,872	+		PFLU_RS24340	0.42	-0.4
5,449,873	-		PFLU_RS24340	0.42	-0.0
5,449,888	-		PFLU_RS24340	0.45	-0.0
5,449,888	-		PFLU_RS24340	0.45	+0.5
5,450,062	+		PFLU_RS24340	0.79	-1.2
5,450,062	+		PFLU_RS24340	0.79	-0.5
5,450,063	-		PFLU_RS24340	0.79	+0.4
5,450,141	+				+0.2
5,450,141	+				+0.1
5,450,141	+				-0.1
5,450,141	+				-0.5
5,450,141	+				+0.2
5,450,141	+				-0.3
5,450,141	+				+0.4
5,450,141	+				+0.8
5,450,141	+				-1.5
5,450,141	+				+0.4
5,450,141	+				-0.6
5,450,141	+				-0.9
5,450,141	+				+0.3
5,450,141	+				+0.8
5,450,141	+				-0.5
5,450,141	+				+0.1
5,450,141	+				-1.4
5,450,141	+				-1.1
5,450,141	+				+1.2
5,450,141	+				-1.4
5,450,141	+				-0.8
5,450,141	+				+1.1
5,450,141	+				-0.5
5,450,142	-				-1.8
5,450,142	-				-0.9
5,450,142	-				-0.2
5,450,142	-				+0.2
5,450,142	-				-0.3
5,450,142	-				-1.5
5,450,142	-				-0.4
5,450,142	-				+1.0
5,450,142	-				-0.0
5,450,142	-				-0.8
5,450,142	-				+0.0
5,450,142	-				-0.7
5,450,142	-				+0.4
5,450,142	-				-0.1
5,450,142	-				+1.8
5,450,142	-				-0.1
5,450,170	+				+0.1
5,450,170	+				-0.6
5,450,170	+				-0.1
5,450,171	-				-0.0
5,450,171	-				+1.4
5,450,171	-				+0.9
5,450,171	-				+2.1
5,450,171	-				-0.6
5,450,171	-				+0.8
5,450,205	+				-0.2
5,450,206	-				+0.2
5,450,218	+				+1.7
5,450,218	+				+0.4
5,450,218	+				+1.0
5,450,218	+				+0.4
5,450,218	+				+0.6
5,450,218	+				+0.5
5,450,218	+				+0.8
5,450,218	+				-0.8
5,450,219	-				-1.0
5,450,219	-				+1.1
5,450,219	-				-0.2
5,450,219	-				-0.4
5,450,219	-				-0.8
5,450,219	-				-0.1
5,450,219	-				+1.2
5,450,219	-				-0.5
5,450,219	-				+1.2
5,450,219	-				-0.7
5,450,219	-				-0.6
5,450,219	-				+1.8
5,450,219	-				-0.3
5,450,219	-				+1.5
5,450,219	-				+0.8
5,450,219	-				+1.8
5,450,219	-				-0.0
5,450,261	+				+1.3
5,450,262	-				+0.3
5,450,310	-				-1.3