Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS12445

Experiment: Glucose (C) and Ammonium chloride (N); with MOPS; with PEG

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and Ammonium chloride (N); with MOPS; with PEG
2,780,543	-				+0.5
2,780,657	-				-0.3
2,780,824	+				-0.1
2,780,825	-				+1.5
2,780,989	-				+0.4
2,781,025	-				+0.6
2,781,317	-				+1.2
2,781,317	-				-2.4
2,781,537	-				-1.0
2,781,537	-				-2.9
2,781,538	+				-1.6
2,781,538	+				-1.8
2,781,538	+				-2.8
2,781,539	-				-1.4
2,781,539	-				-2.7
2,781,539	-				-0.6
2,781,556	+				-3.0
2,781,556	+				-1.4
2,781,557	-				-2.1
2,781,557	-				-1.1
2,781,557	-				-2.7
2,781,557	-				-1.1
2,781,557	-				+0.2
2,781,557	-				-0.8
2,781,559	+				-2.4
2,781,560	-				-2.6
2,781,620	-				-3.8
2,781,646	+				-0.4
2,781,646	+				-2.1
2,781,646	+				-1.8
2,781,647	-				-1.1
2,781,647	-				-2.1
2,781,769	+		PFLU_RS12445	0.12	-2.9
2,781,769	+		PFLU_RS12445	0.12	-1.1
2,781,769	+		PFLU_RS12445	0.12	-2.5
2,781,770	-		PFLU_RS12445	0.12	-3.0
2,781,770	-		PFLU_RS12445	0.12	-2.4
2,781,770	-		PFLU_RS12445	0.12	-1.1
2,781,770	-		PFLU_RS12445	0.12	-2.3
2,781,853	+		PFLU_RS12445	0.15	-2.6
2,781,864	+		PFLU_RS12445	0.16	-3.3
2,781,864	+		PFLU_RS12445	0.16	-1.2
2,781,865	-		PFLU_RS12445	0.16	-1.6
2,781,907	+		PFLU_RS12445	0.18	+1.5
2,781,943	+		PFLU_RS12445	0.19	-2.3
2,781,943	+		PFLU_RS12445	0.19	-1.3
2,781,943	+		PFLU_RS12445	0.19	-3.6
2,781,943	+		PFLU_RS12445	0.19	-1.8
2,781,943	+		PFLU_RS12445	0.19	-1.0
2,781,944	-		PFLU_RS12445	0.19	-0.4
2,781,973	+		PFLU_RS12445	0.20	-1.8
2,781,973	+		PFLU_RS12445	0.20	-0.4
2,781,973	+		PFLU_RS12445	0.20	-1.0
2,781,973	+		PFLU_RS12445	0.20	-1.0
2,781,990	-		PFLU_RS12445	0.21	-1.6
2,782,018	+		PFLU_RS12445	0.22	-2.3
2,782,018	+		PFLU_RS12445	0.22	-2.4
2,782,018	+		PFLU_RS12445	0.22	-2.1
2,782,018	+		PFLU_RS12445	0.22	-2.6
2,782,019	-		PFLU_RS12445	0.22	-2.4
2,782,019	-		PFLU_RS12445	0.22	-1.4
2,782,019	-		PFLU_RS12445	0.22	-0.8
2,782,019	-		PFLU_RS12445	0.22	-1.6
2,782,075	+		PFLU_RS12445	0.25	-2.3
2,782,075	+		PFLU_RS12445	0.25	-2.1
2,782,123	+		PFLU_RS12445	0.27	-1.8
2,782,123	+		PFLU_RS12445	0.27	-1.4
2,782,123	+		PFLU_RS12445	0.27	-3.4
2,782,123	+		PFLU_RS12445	0.27	-1.6
2,782,123	+		PFLU_RS12445	0.27	-2.3
2,782,124	-		PFLU_RS12445	0.27	-0.6
2,782,124	-		PFLU_RS12445	0.27	-1.6
2,782,124	-		PFLU_RS12445	0.27	-0.8
2,782,124	-		PFLU_RS12445	0.27	-1.3
2,782,124	-		PFLU_RS12445	0.27	-2.2
2,782,156	+		PFLU_RS12445	0.28	-0.8
2,782,156	+		PFLU_RS12445	0.28	-1.1
2,782,157	-		PFLU_RS12445	0.28	-1.6
2,782,166	-		PFLU_RS12445	0.28	-1.2
2,782,192	+		PFLU_RS12445	0.29	-0.4
2,782,234	+		PFLU_RS12445	0.31	-1.4
2,782,234	+		PFLU_RS12445	0.31	-1.4
2,782,235	-		PFLU_RS12445	0.31	-2.0
2,782,235	-		PFLU_RS12445	0.31	-2.4
2,782,235	-		PFLU_RS12445	0.31	-2.4
2,782,261	+		PFLU_RS12445	0.32	+0.2
2,782,261	+		PFLU_RS12445	0.32	+0.2
2,782,262	-		PFLU_RS12445	0.32	+0.2
2,782,327	+		PFLU_RS12445	0.35	-1.6
2,782,327	+		PFLU_RS12445	0.35	-2.5
2,782,327	+		PFLU_RS12445	0.35	-2.5
2,782,327	+		PFLU_RS12445	0.35	-3.0
2,782,327	+		PFLU_RS12445	0.35	+0.2
2,782,327	+		PFLU_RS12445	0.35	-0.8
2,782,327	+		PFLU_RS12445	0.35	-1.0
2,782,328	-		PFLU_RS12445	0.35	-1.6
2,782,328	-		PFLU_RS12445	0.35	-2.5
2,782,328	-		PFLU_RS12445	0.35	-0.0
2,782,328	-		PFLU_RS12445	0.35	+0.2
2,782,328	-		PFLU_RS12445	0.35	-1.1
2,782,328	-		PFLU_RS12445	0.35	-1.1
2,782,328	-		PFLU_RS12445	0.35	-2.6
2,782,328	-		PFLU_RS12445	0.35	-1.6
2,782,328	-		PFLU_RS12445	0.35	-0.8
2,782,328	-		PFLU_RS12445	0.35	-0.4
2,782,328	-		PFLU_RS12445	0.35	-0.8
2,782,328	-		PFLU_RS12445	0.35	+0.8
2,782,328	-		PFLU_RS12445	0.35	-2.4
2,782,328	-		PFLU_RS12445	0.35	-0.9
2,782,328	-		PFLU_RS12445	0.35	-2.9
2,782,328	-		PFLU_RS12445	0.35	-0.6
2,782,349	+		PFLU_RS12445	0.36	-1.0
2,782,350	-		PFLU_RS12445	0.36	+0.2
2,782,360	+		PFLU_RS12445	0.36	-2.1
2,782,360	+		PFLU_RS12445	0.36	+1.2
2,782,360	+		PFLU_RS12445	0.36	-1.1
2,782,360	+		PFLU_RS12445	0.36	-1.7
2,782,360	+		PFLU_RS12445	0.36	-1.4
2,782,360	+		PFLU_RS12445	0.36	-2.0
2,782,360	+		PFLU_RS12445	0.36	-0.4
2,782,361	-		PFLU_RS12445	0.36	-2.0
2,782,361	-		PFLU_RS12445	0.36	-1.4
2,782,361	-		PFLU_RS12445	0.36	-0.0
2,782,361	-		PFLU_RS12445	0.36	-1.4
2,782,361	-		PFLU_RS12445	0.36	-1.6
2,782,379	-		PFLU_RS12445	0.37	-2.9
2,782,411	+		PFLU_RS12445	0.38	-1.0
2,782,411	+		PFLU_RS12445	0.38	-1.7
2,782,424	+		PFLU_RS12445	0.39	-2.6
2,782,424	+		PFLU_RS12445	0.39	-0.4
2,782,543	+		PFLU_RS12445	0.44	-2.3
2,782,580	-		PFLU_RS12445	0.45	-2.0
2,782,580	-		PFLU_RS12445	0.45	-2.5
2,782,654	+		PFLU_RS12445	0.48	-0.4
2,782,654	+		PFLU_RS12445	0.48	-2.8
2,782,654	+		PFLU_RS12445	0.48	-3.2
2,782,654	+		PFLU_RS12445	0.48	-0.7
2,782,655	-		PFLU_RS12445	0.48	-0.0
2,782,655	-		PFLU_RS12445	0.48	-1.0
2,782,655	-		PFLU_RS12445	0.48	-3.4
2,782,655	-		PFLU_RS12445	0.48	-2.5
2,782,706	+		PFLU_RS12445	0.50	-0.4
2,782,777	+		PFLU_RS12445	0.53	-2.1
2,782,777	+		PFLU_RS12445	0.53	-3.7
2,782,777	+		PFLU_RS12445	0.53	-2.1
2,782,778	-		PFLU_RS12445	0.53	-0.2
2,782,924	+		PFLU_RS12445	0.59	-1.1
2,782,925	-		PFLU_RS12445	0.59	-0.4
2,782,925	-		PFLU_RS12445	0.59	-1.4
2,782,925	-		PFLU_RS12445	0.59	-2.9
2,782,927	+		PFLU_RS12445	0.60	-2.0
2,782,928	-		PFLU_RS12445	0.60	-0.6
2,782,928	-		PFLU_RS12445	0.60	-2.1
2,783,031	+		PFLU_RS12445	0.64	-1.4
2,783,031	+		PFLU_RS12445	0.64	-3.0
2,783,031	+		PFLU_RS12445	0.64	-1.8
2,783,031	+		PFLU_RS12445	0.64	-1.4
2,783,031	+		PFLU_RS12445	0.64	-1.3
2,783,032	-		PFLU_RS12445	0.64	-2.1
2,783,032	-		PFLU_RS12445	0.64	-0.5
2,783,032	-		PFLU_RS12445	0.64	-2.0
2,783,032	-		PFLU_RS12445	0.64	+0.2
2,783,032	-		PFLU_RS12445	0.64	-1.6
2,783,032	-		PFLU_RS12445	0.64	-1.1
2,783,050	+		PFLU_RS12445	0.65	-1.8
2,783,051	-		PFLU_RS12445	0.65	-2.6
2,783,051	-		PFLU_RS12445	0.65	-1.4
2,783,051	-		PFLU_RS12445	0.65	-0.2
2,783,194	+		PFLU_RS12445	0.70	-2.8
2,783,195	-		PFLU_RS12445	0.71	-3.0
2,783,195	-		PFLU_RS12445	0.71	-1.6
2,783,230	+		PFLU_RS12445	0.72	-2.5
2,783,266	+		PFLU_RS12445	0.73	-2.0
2,783,299	+		PFLU_RS12445	0.75	-2.7
2,783,300	-		PFLU_RS12445	0.75	-1.1
2,783,300	-		PFLU_RS12445	0.75	-1.7
2,783,300	-		PFLU_RS12445	0.75	-1.0
2,783,300	-		PFLU_RS12445	0.75	-2.9
2,783,302	+		PFLU_RS12445	0.75	-1.1
2,783,302	+		PFLU_RS12445	0.75	-0.4
2,783,302	+		PFLU_RS12445	0.75	-1.4
2,783,303	-		PFLU_RS12445	0.75	-1.4
2,783,303	-		PFLU_RS12445	0.75	-1.0
2,783,303	-		PFLU_RS12445	0.75	-3.5
2,783,303	-		PFLU_RS12445	0.75	-1.4
2,783,303	-		PFLU_RS12445	0.75	-1.1
2,783,309	+		PFLU_RS12445	0.75	-2.0
2,783,331	+		PFLU_RS12445	0.76	-3.0
2,783,393	+		PFLU_RS12445	0.79	-1.7
2,783,393	+		PFLU_RS12445	0.79	-3.6
2,783,393	+		PFLU_RS12445	0.79	+1.2
2,783,393	+		PFLU_RS12445	0.79	-2.1
2,783,393	+		PFLU_RS12445	0.79	-1.4
2,783,394	-		PFLU_RS12445	0.79	-0.9
2,783,394	-		PFLU_RS12445	0.79	-0.4
2,783,394	-		PFLU_RS12445	0.79	-2.6
2,783,394	-		PFLU_RS12445	0.79	+0.2
2,783,394	-		PFLU_RS12445	0.79	-1.6
2,783,483	-		PFLU_RS12445	0.82	-1.8
2,783,657	+		PFLU_RS12445	0.89	-2.0
2,783,657	+		PFLU_RS12445	0.89	-2.1
2,783,704	+				+0.2
2,783,704	+				-1.4
2,783,704	+				-0.4
2,783,704	+				-0.1
2,783,704	+				-2.0
2,783,704	+				-1.9
2,783,705	-				-1.0
2,783,705	-				-0.4
2,783,705	-				-0.8
2,783,772	-				-1.8
2,783,772	-				-2.3
2,783,800	+				-2.5
2,783,800	+				-2.4
2,783,800	+				-3.1
2,783,928	+				-2.9
2,783,928	+				-1.6
2,783,928	+				-0.9
2,783,928	+				-2.7
2,783,929	-				-2.3
2,783,929	-				-2.1
2,783,935	+				-0.8
2,783,935	+				-2.6
2,783,935	+				-0.8
2,783,936	-				-1.3
2,783,936	-				-2.0
2,783,936	-				-1.7
2,783,936	-				-2.0
2,783,936	-				-1.2
2,783,936	-				-2.7
2,783,936	-				+0.4
2,783,936	-				-1.4
2,783,936	-				-2.7
2,783,958	-				-0.9
2,783,958	-				-1.0
2,783,966	+				-3.0
2,783,983	-				+0.4
2,784,163	-				-2.5
2,784,212	+		PFLU_RS12450	0.11	-2.0
2,784,346	-		PFLU_RS12450	0.20	-1.1
2,784,349	+		PFLU_RS12450	0.20	-1.1
2,784,349	+		PFLU_RS12450	0.20	-1.6
2,784,349	+		PFLU_RS12450	0.20	+2.2
2,784,349	+		PFLU_RS12450	0.20	+0.8
2,784,350	-		PFLU_RS12450	0.20	-1.4
2,784,350	-		PFLU_RS12450	0.20	+0.2
2,784,350	-		PFLU_RS12450	0.20	-1.8
2,784,405	+		PFLU_RS12450	0.23	-0.6
2,784,405	+		PFLU_RS12450	0.23	-2.4
2,784,405	+		PFLU_RS12450	0.23	-1.8
2,784,405	+		PFLU_RS12450	0.23	-1.6
2,784,405	+		PFLU_RS12450	0.23	-1.0
2,784,405	+		PFLU_RS12450	0.23	-2.1
2,784,405	+		PFLU_RS12450	0.23	-2.3
2,784,405	+		PFLU_RS12450	0.23	-0.8
2,784,405	+		PFLU_RS12450	0.23	+0.6
2,784,405	+		PFLU_RS12450	0.23	-0.9
2,784,406	-		PFLU_RS12450	0.23	-2.3
2,784,406	-		PFLU_RS12450	0.23	+1.2
2,784,406	-		PFLU_RS12450	0.23	-2.0
2,784,406	-		PFLU_RS12450	0.23	-2.0
2,784,406	-		PFLU_RS12450	0.23	-0.8
2,784,406	-		PFLU_RS12450	0.23	-0.4
2,784,406	-		PFLU_RS12450	0.23	-1.8
2,784,406	-		PFLU_RS12450	0.23	-1.4
2,784,406	-		PFLU_RS12450	0.23	-0.1
2,784,406	-		PFLU_RS12450	0.23	+0.5
2,784,408	+		PFLU_RS12450	0.23	+1.2
2,784,408	+		PFLU_RS12450	0.23	-2.1
2,784,408	+		PFLU_RS12450	0.23	-1.5
2,784,408	+		PFLU_RS12450	0.23	-1.6
2,784,409	-		PFLU_RS12450	0.23	-2.4
2,784,409	-		PFLU_RS12450	0.23	-1.4
2,784,409	-		PFLU_RS12450	0.23	-2.4
2,784,419	+		PFLU_RS12450	0.24	-1.4
2,784,565	+		PFLU_RS12450	0.33	-0.8
2,784,566	-		PFLU_RS12450	0.33	-2.0
2,784,569	+		PFLU_RS12450	0.33	-1.4
2,784,569	+		PFLU_RS12450	0.33	+0.4
2,784,570	-		PFLU_RS12450	0.33	+0.2
2,784,570	-		PFLU_RS12450	0.33	-2.5
2,784,570	-		PFLU_RS12450	0.33	-1.8
2,784,648	+		PFLU_RS12450	0.38	-0.4
2,784,648	+		PFLU_RS12450	0.38	-0.8
2,784,649	-		PFLU_RS12450	0.38	-1.6
2,784,649	-		PFLU_RS12450	0.38	-0.8
2,784,649	-		PFLU_RS12450	0.38	+0.2
2,784,798	+		PFLU_RS12450	0.47	-2.6
2,784,831	+		PFLU_RS12450	0.49	-0.8
2,784,831	+		PFLU_RS12450	0.49	-0.8
2,784,831	+		PFLU_RS12450	0.49	-0.4
2,784,831	+		PFLU_RS12450	0.49	-2.3
2,784,831	+		PFLU_RS12450	0.49	-1.6
2,784,832	-		PFLU_RS12450	0.49	-0.8
2,784,832	-		PFLU_RS12450	0.49	-0.6
2,784,832	-		PFLU_RS12450	0.49	-1.4
2,784,885	+		PFLU_RS12450	0.52	+0.2
2,784,885	+		PFLU_RS12450	0.52	-1.4
2,784,885	+		PFLU_RS12450	0.52	-2.7
2,784,886	-		PFLU_RS12450	0.52	-2.4
2,784,886	-		PFLU_RS12450	0.52	-1.4