Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS31650

Experiment: Glucose (C) and L-Glutamine (N); with TAPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and L-Glutamine (N); with TAPS; with chloride
3,603,416	+				-1.9
3,603,454	+				+1.3
3,603,455	-				+1.3
3,603,475	+				-2.2
3,603,476	-				-1.5
3,603,488	+				+1.3
3,603,488	+				+2.0
3,603,488	+				-0.7
3,603,489	-				+1.0
3,603,489	-				-1.9
3,603,492	+				-1.3
3,603,492	+				-0.1
3,603,492	+				-1.8
3,603,492	+				+0.1
3,603,492	+				-0.4
3,603,492	+				+0.6
3,603,492	+				+1.0
3,603,492	+				-1.2
3,603,492	+				-1.2
3,603,492	+				+0.3
3,603,493	-				+0.1
3,603,493	-				-0.7
3,603,493	-				-1.9
3,603,493	-				+2.7
3,603,493	-				+0.5
3,603,493	-				+0.1
3,603,493	-				-1.9
3,603,493	-				-0.1
3,603,493	-				+1.8
3,603,496	+				+2.3
3,603,496	+				-1.3
3,603,497	-				+0.7
3,603,497	-				-0.5
3,603,497	-				-2.4
3,603,497	-				+1.3
3,603,497	-				-1.7
3,603,523	+		PFLU_RS15855	0.12	-2.1
3,603,523	+		PFLU_RS15855	0.12	+0.7
3,603,523	+		PFLU_RS15855	0.12	-1.3
3,603,784	+		PFLU_RS15855	0.39	+0.8
3,603,784	+		PFLU_RS15855	0.39	-0.3
3,603,784	+		PFLU_RS15855	0.39	+0.5
3,603,784	+		PFLU_RS15855	0.39	+0.2
3,603,785	-		PFLU_RS15855	0.39	+3.3
3,603,785	-		PFLU_RS15855	0.39	-1.5
3,603,815	+		PFLU_RS15855	0.43	+0.8
3,603,816	-		PFLU_RS15855	0.43	-0.5
3,603,891	+		PFLU_RS15855	0.51	-0.3
3,603,891	+		PFLU_RS15855	0.51	-0.5
3,603,891	+		PFLU_RS15855	0.51	+0.6
3,603,891	+		PFLU_RS15855	0.51	+0.4
3,603,891	+		PFLU_RS15855	0.51	-0.1
3,603,891	+		PFLU_RS15855	0.51	+0.0
3,603,891	+		PFLU_RS15855	0.51	+0.3
3,603,891	+		PFLU_RS15855	0.51	+0.7
3,603,891	+		PFLU_RS15855	0.51	+0.7
3,603,892	-		PFLU_RS15855	0.51	+1.8
3,603,892	-		PFLU_RS15855	0.51	+0.4
3,603,892	-		PFLU_RS15855	0.51	-2.2
3,603,892	-		PFLU_RS15855	0.51	+0.3
3,603,892	-		PFLU_RS15855	0.51	+0.3
3,603,892	-		PFLU_RS15855	0.51	-0.1
3,603,892	-		PFLU_RS15855	0.51	+1.0
3,603,892	-		PFLU_RS15855	0.51	-1.3
3,603,892	-		PFLU_RS15855	0.51	-0.3
3,603,892	-		PFLU_RS15855	0.51	+0.5
3,603,892	-		PFLU_RS15855	0.51	+0.5
3,603,927	+		PFLU_RS15855	0.54	+0.5
3,603,928	-		PFLU_RS15855	0.55	+2.0
3,603,948	+		PFLU_RS15855	0.57	-0.5
3,603,948	+		PFLU_RS15855	0.57	+0.3
3,603,949	-		PFLU_RS15855	0.57	+0.5
3,603,978	+		PFLU_RS15855	0.60	+0.0
3,603,978	+		PFLU_RS15855	0.60	-0.6
3,603,978	+		PFLU_RS15855	0.60	-0.5
3,603,978	+		PFLU_RS15855	0.60	-0.0
3,603,979	-		PFLU_RS15855	0.60	+0.9
3,603,992	+		PFLU_RS15855	0.61	-0.9
3,603,992	+		PFLU_RS15855	0.61	-0.5
3,603,992	+		PFLU_RS15855	0.61	-1.2
3,603,993	-		PFLU_RS15855	0.61	-0.4
3,604,006	+		PFLU_RS15855	0.63	+0.2
3,604,006	+		PFLU_RS15855	0.63	+0.9
3,604,007	-		PFLU_RS15855	0.63	+0.6
3,604,007	-		PFLU_RS15855	0.63	-0.5
3,604,012	+		PFLU_RS15855	0.63	+0.8
3,604,012	+		PFLU_RS15855	0.63	+0.8
3,604,013	-		PFLU_RS15855	0.64	-0.1
3,604,017	+		PFLU_RS15855	0.64	+0.1
3,604,067	+		PFLU_RS15855	0.69	+0.0
3,604,097	-		PFLU_RS15855	0.72	+1.7
3,604,097	-		PFLU_RS15855	0.72	+1.1
3,604,120	+		PFLU_RS15855	0.75	+0.0
3,604,120	+		PFLU_RS15855	0.75	+0.7
3,604,120	+		PFLU_RS15855	0.75	+0.3
3,604,120	+		PFLU_RS15855	0.75	+0.9
3,604,121	-		PFLU_RS15855	0.75	-0.0
3,604,121	-		PFLU_RS15855	0.75	+1.1
3,604,121	-		PFLU_RS15855	0.75	+0.3
3,604,121	-		PFLU_RS15855	0.75	+0.3
3,604,121	-		PFLU_RS15855	0.75	-0.7
3,604,121	-		PFLU_RS15855	0.75	-0.5
3,604,121	-		PFLU_RS15855	0.75	-0.3
3,604,121	-		PFLU_RS15855	0.75	-0.2
3,604,121	-		PFLU_RS15855	0.75	+1.5
3,604,121	-		PFLU_RS15855	0.75	-3.1
3,604,121	-		PFLU_RS15855	0.75	+0.8
3,604,146	+		PFLU_RS15855	0.78	-0.1
3,604,147	-		PFLU_RS15855	0.78	+0.8
3,604,153	+		PFLU_RS15855	0.78	-1.2
3,604,153	+		PFLU_RS15855	0.78	-0.2
3,604,153	+		PFLU_RS15855	0.78	-0.8
3,604,217	-		PFLU_RS15855	0.85	-0.5
3,604,217	-		PFLU_RS15855	0.85	-0.6
3,604,217	-		PFLU_RS15855	0.85	+0.3
3,604,217	-		PFLU_RS15855	0.85	-0.8
3,604,217	-		PFLU_RS15855	0.85	+2.3
3,604,233	+		PFLU_RS15855	0.87	+1.5
3,604,233	+		PFLU_RS15855	0.87	-1.1
3,604,234	-		PFLU_RS15855	0.87	-1.3
3,604,234	-		PFLU_RS15855	0.87	+0.5
3,604,236	+		PFLU_RS15855	0.87	+1.3
3,604,332	+				-0.5
3,604,332	+				+0.3
3,604,332	+				+0.6
3,604,332	+				+0.6
3,604,333	-				+2.9
3,604,333	-				-0.7
3,604,333	-				+0.5
3,604,333	-				-1.1
3,604,333	-				-0.2
3,604,333	-				+0.8
3,604,333	-				+2.3
3,604,354	+				+1.7
3,604,355	-				-1.4
3,604,516	+		PFLU_RS31650	0.76	-2.5
3,604,516	+		PFLU_RS31650	0.76	-0.8
3,604,517	-		PFLU_RS31650	0.76	-1.1
3,604,517	-		PFLU_RS31650	0.76	-0.2
3,604,564	+				+0.2
3,604,565	-				+0.5
3,604,689	+				-0.3
3,604,690	-				+0.9
3,604,690	-				-0.3
3,604,690	-				+0.7
3,604,690	-				+0.4
3,604,695	+				-0.3
3,604,695	+				-0.7
3,604,695	+				-0.4
3,604,695	+				-1.9
3,604,695	+				-0.9
3,604,695	+				+1.3
3,604,695	+				+0.4
3,604,696	-				-1.2
3,604,696	-				-0.1
3,604,696	-				+0.5
3,604,696	-				-0.3
3,604,696	-				+0.6
3,604,696	-				+0.0
3,604,696	-				+0.5
3,604,696	-				+0.4
3,604,696	-				-0.3
3,604,701	+				+1.1
3,604,701	+				+1.8
3,604,731	+				-1.3
3,604,847	+		PFLU_RS15860	0.13	+0.5
3,604,847	+		PFLU_RS15860	0.13	-0.3
3,604,847	+		PFLU_RS15860	0.13	-1.3
3,604,847	+		PFLU_RS15860	0.13	-0.6
3,604,868	+		PFLU_RS15860	0.15	-0.4
3,604,868	+		PFLU_RS15860	0.15	-0.7
3,604,976	+		PFLU_RS15860	0.25	+0.3
3,604,976	+		PFLU_RS15860	0.25	+1.3
3,604,977	-		PFLU_RS15860	0.25	-0.2
3,604,982	-		PFLU_RS15860	0.25	-0.5
3,605,091	+		PFLU_RS15860	0.35	-0.3
3,605,092	-		PFLU_RS15860	0.35	-2.1
3,605,178	+		PFLU_RS15860	0.43	-0.7
3,605,179	-		PFLU_RS15860	0.43	-1.1
3,605,180	+		PFLU_RS15860	0.43	+0.7
3,605,180	+		PFLU_RS15860	0.43	+0.7
3,605,181	-		PFLU_RS15860	0.43	-1.9
3,605,222	+		PFLU_RS15860	0.47	+1.3
3,605,223	-		PFLU_RS15860	0.47	-2.2
3,605,251	+		PFLU_RS15860	0.49	-1.6
3,605,251	+		PFLU_RS15860	0.49	-0.2
3,605,252	-		PFLU_RS15860	0.49	+1.3
3,605,252	-		PFLU_RS15860	0.49	+0.8
3,605,298	+		PFLU_RS15860	0.53	-0.7
3,605,308	+		PFLU_RS15860	0.54	-0.3
3,605,309	-		PFLU_RS15860	0.54	+3.6
3,605,376	-		PFLU_RS15860	0.60	+1.6
3,605,388	+		PFLU_RS15860	0.61	-0.8
3,605,388	+		PFLU_RS15860	0.61	-0.7
3,605,388	+		PFLU_RS15860	0.61	+0.3
3,605,388	+		PFLU_RS15860	0.61	+1.3
3,605,388	+		PFLU_RS15860	0.61	-0.4
3,605,388	+		PFLU_RS15860	0.61	+0.4
3,605,389	-		PFLU_RS15860	0.61	-0.8
3,605,447	-		PFLU_RS15860	0.66	-0.1
3,605,447	-		PFLU_RS15860	0.66	-1.5
3,605,510	+		PFLU_RS15860	0.72	+1.3