Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS15410

Experiment: Glucose (C) and L-Glutamine (N); with TAPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glucose (C) and L-Glutamine (N); with TAPS; with chloride
3,455,886	+		PFLU_RS15405	0.85	-1.8
3,455,886	+		PFLU_RS15405	0.85	+1.2
3,455,886	+		PFLU_RS15405	0.85	-0.6
3,455,886	+		PFLU_RS15405	0.85	-0.6
3,455,887	-		PFLU_RS15405	0.85	-1.6
3,455,887	-		PFLU_RS15405	0.85	+2.8
3,455,900	+		PFLU_RS15405	0.86	-1.4
3,455,900	+		PFLU_RS15405	0.86	-0.8
3,455,900	+		PFLU_RS15405	0.86	-0.6
3,455,900	+		PFLU_RS15405	0.86	-2.1
3,455,900	+		PFLU_RS15405	0.86	-0.4
3,455,900	+		PFLU_RS15405	0.86	-0.6
3,455,900	+		PFLU_RS15405	0.86	+0.5
3,455,900	+		PFLU_RS15405	0.86	+1.5
3,455,900	+		PFLU_RS15405	0.86	-2.0
3,455,900	+		PFLU_RS15405	0.86	-0.8
3,455,900	+		PFLU_RS15405	0.86	-0.9
3,455,900	+		PFLU_RS15405	0.86	+0.5
3,455,901	-		PFLU_RS15405	0.86	+3.5
3,455,901	-		PFLU_RS15405	0.86	-0.5
3,455,901	-		PFLU_RS15405	0.86	-1.2
3,455,901	-		PFLU_RS15405	0.86	+0.6
3,455,901	-		PFLU_RS15405	0.86	+2.8
3,455,901	-		PFLU_RS15405	0.86	+0.1
3,455,901	-		PFLU_RS15405	0.86	-0.0
3,455,901	-		PFLU_RS15405	0.86	+0.8
3,455,901	-		PFLU_RS15405	0.86	+0.2
3,455,901	-		PFLU_RS15405	0.86	-0.3
3,455,901	-		PFLU_RS15405	0.86	+0.9
3,455,901	-		PFLU_RS15405	0.86	+1.6
3,455,901	-		PFLU_RS15405	0.86	+0.2
3,455,901	-		PFLU_RS15405	0.86	+0.3
3,455,901	-		PFLU_RS15405	0.86	-2.8
3,455,901	-		PFLU_RS15405	0.86	-2.7
3,455,901	-		PFLU_RS15405	0.86	+0.2
3,455,901	-		PFLU_RS15405	0.86	+0.7
3,455,901	-		PFLU_RS15405	0.86	-0.2
3,455,902	+		PFLU_RS15405	0.86	-1.4
3,455,903	-		PFLU_RS15405	0.86	+1.7
3,455,903	-		PFLU_RS15405	0.86	-2.1
3,455,903	-		PFLU_RS15405	0.86	+0.1
3,455,903	-		PFLU_RS15405	0.86	+0.3
3,455,903	-		PFLU_RS15405	0.86	+1.5
3,455,903	-		PFLU_RS15405	0.86	+1.0
3,455,903	-		PFLU_RS15405	0.86	+2.5
3,455,903	-		PFLU_RS15405	0.86	-2.2
3,455,903	-		PFLU_RS15405	0.86	+1.5
3,455,944	+		PFLU_RS15405	0.89	-0.2
3,455,944	+		PFLU_RS15405	0.89	+1.1
3,455,944	+		PFLU_RS15405	0.89	+0.9
3,455,944	+		PFLU_RS15405	0.89	-1.5
3,455,944	+		PFLU_RS15405	0.89	-0.8
3,455,944	+		PFLU_RS15405	0.89	+0.7
3,455,944	+		PFLU_RS15405	0.89	-1.4
3,455,944	+		PFLU_RS15405	0.89	+0.5
3,455,944	+		PFLU_RS15405	0.89	-0.6
3,455,945	-		PFLU_RS15405	0.89	-0.8
3,455,945	-		PFLU_RS15405	0.89	-0.1
3,455,945	-		PFLU_RS15405	0.89	+0.6
3,455,945	-		PFLU_RS15405	0.89	+1.9
3,455,945	-		PFLU_RS15405	0.89	-0.0
3,455,945	-		PFLU_RS15405	0.89	-0.3
3,455,945	-		PFLU_RS15405	0.89	+0.9
3,455,945	-		PFLU_RS15405	0.89	+0.2
3,455,945	-		PFLU_RS15405	0.89	+0.2
3,455,945	-		PFLU_RS15405	0.89	-0.9
3,455,984	+				+0.2
3,455,984	+				-2.1
3,455,984	+				-1.1
3,455,984	+				+0.9
3,455,985	-				-0.0
3,455,985	-				+0.4
3,455,985	-				+0.7
3,456,061	+				-0.6
3,456,067	+				-0.2
3,456,067	+				+0.4
3,456,067	+				+1.5
3,456,067	+				+0.2
3,456,106	+				-0.6
3,456,106	+				+0.2
3,456,107	-				+0.8
3,456,159	+				+0.1
3,456,160	-				-1.1
3,456,193	+				+0.6
3,456,206	-				-0.4
3,456,213	-				+1.1
3,456,274	-				-0.0
3,456,319	-				+1.8
3,456,319	-				+1.2
3,456,340	+				+0.6
3,456,340	+				-0.1
3,456,381	+				-1.5
3,456,382	-				+0.2
3,456,467	-				+1.2
3,456,467	-				-2.0
3,456,476	+				-0.2
3,456,488	+				-1.5
3,456,489	-				+0.9
3,456,567	+				-0.1
3,456,619	+				-0.9
3,456,619	+				-0.5
3,456,619	+				-0.7
3,456,619	+				+0.6
3,456,620	-				-0.6
3,456,620	-				+1.8
3,456,623	+				+0.1
3,456,670	-				+0.1
3,456,692	-				+1.0
3,456,719	+				-1.4
3,456,719	+				-0.1
3,456,783	+				+0.6
3,456,783	+				+0.2
3,456,796	+				-1.1
3,456,797	-				+1.7
3,456,803	+				+0.4
3,457,127	-		PFLU_RS15410	0.32	+1.2
3,457,416	-		PFLU_RS15410	0.60	+1.2
3,457,416	-		PFLU_RS15410	0.60	+0.2
3,457,416	-		PFLU_RS15410	0.60	+0.2
3,457,698	-		PFLU_RS15410	0.88	+2.2
3,457,698	-		PFLU_RS15410	0.88	+1.2
3,457,698	-		PFLU_RS15410	0.88	-1.1
3,457,698	-		PFLU_RS15410	0.88	-0.4
3,457,705	-		PFLU_RS15410	0.88	-0.8
3,457,843	-				+0.6
3,457,843	-				+0.5
3,457,843	-				+0.2
3,457,850	-				+0.2
3,457,850	-				+0.2
3,457,850	-				-0.1
3,457,865	-				-0.4
3,457,865	-				-0.6
3,457,865	-				-1.5
3,457,900	+				+0.6
3,457,900	+				-1.6
3,457,901	-				+0.9
3,457,901	-				+0.0
3,457,903	+				+3.1
3,457,903	+				+2.8
3,457,903	+				-0.4
3,457,904	-				+0.1
3,457,904	-				-0.8
3,457,941	+				+0.2
3,457,941	+				+0.5
3,457,941	+				+0.8
3,457,941	+				+2.5
3,457,941	+				-0.8
3,457,941	+				-0.4
3,457,941	+				-0.7
3,457,941	+				+1.2
3,457,941	+				-1.1
3,457,942	-				+2.5
3,457,942	-				-0.5
3,457,942	-				+1.2
3,457,942	-				+0.2
3,457,957	+				+1.1
3,457,985	+				+0.5
3,457,985	+				-0.0
3,457,986	-				-1.1
3,457,986	-				-0.9
3,458,002	-				+0.1
3,458,026	+				+1.0
3,458,026	+				+0.9
3,458,026	+				+0.2
3,458,026	+				-0.2
3,458,026	+				+0.6
3,458,027	-				+0.2
3,458,027	-				-1.1
3,458,027	-				+0.1
3,458,027	-				+1.0
3,458,027	-				-1.2
3,458,027	-				-0.9
3,458,027	-				-1.8
3,458,027	-				-0.4
3,458,027	-				+1.0
3,458,027	-				+0.2
3,458,027	-				-1.0
3,458,027	-				-0.8
3,458,027	-				+1.6
3,458,028	+				-0.1
3,458,028	+				+2.2
3,458,029	-				-1.9
3,458,029	-				+0.6
3,458,105	-				+0.5
3,458,105	-				+0.2
3,458,118	+				+0.4
3,458,280	+		PFLU_RS15415	0.23	-0.5
3,458,469	+		PFLU_RS15415	0.43	+0.5
3,458,469	+		PFLU_RS15415	0.43	-0.5
3,458,469	+		PFLU_RS15415	0.43	-0.2
3,458,469	+		PFLU_RS15415	0.43	-1.9
3,458,469	+		PFLU_RS15415	0.43	-0.5
3,458,483	+		PFLU_RS15415	0.45	-0.4
3,458,483	+		PFLU_RS15415	0.45	-0.4
3,458,483	+		PFLU_RS15415	0.45	-1.5
3,458,483	+		PFLU_RS15415	0.45	+1.5
3,458,483	+		PFLU_RS15415	0.45	+0.9
3,458,483	+		PFLU_RS15415	0.45	+0.6
3,458,483	+		PFLU_RS15415	0.45	+0.2
3,458,483	+		PFLU_RS15415	0.45	-0.4
3,458,483	+		PFLU_RS15415	0.45	+1.0
3,458,483	+		PFLU_RS15415	0.45	-0.1
3,458,483	+		PFLU_RS15415	0.45	-0.0
3,458,483	+		PFLU_RS15415	0.45	+0.2
3,458,483	+		PFLU_RS15415	0.45	+0.5
3,458,484	-		PFLU_RS15415	0.45	+0.7
3,458,484	-		PFLU_RS15415	0.45	+0.3
3,458,484	-		PFLU_RS15415	0.45	-0.1
3,458,484	-		PFLU_RS15415	0.45	+0.3
3,458,484	-		PFLU_RS15415	0.45	+0.4
3,458,484	-		PFLU_RS15415	0.45	-1.1
3,458,484	-		PFLU_RS15415	0.45	+0.5
3,458,537	+		PFLU_RS15415	0.51	+0.8
3,458,537	+		PFLU_RS15415	0.51	-0.6
3,458,537	+		PFLU_RS15415	0.51	-0.3
3,458,538	-		PFLU_RS15415	0.51	-0.1
3,458,538	-		PFLU_RS15415	0.51	-0.4
3,458,538	-		PFLU_RS15415	0.51	+1.2
3,458,538	-		PFLU_RS15415	0.51	+2.1
3,458,538	-		PFLU_RS15415	0.51	-1.4
3,458,813	+		PFLU_RS15415	0.81	-0.8
3,458,814	-		PFLU_RS15415	0.81	+1.4