Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS27990

Experiment: Glycine betaine (C)(N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glycine betaine (C)(N); with MOPS
6,230,260	+				-1.5
6,230,260	+				-2.5
6,230,260	+				-1.6
6,230,260	+				-1.7
6,230,260	+				-0.3
6,230,260	+				-1.3
6,230,260	+				-2.0
6,230,261	-				-1.1
6,230,261	-				-0.7
6,230,261	-				-1.1
6,230,261	-				-1.3
6,230,261	-				-0.4
6,230,261	-				+1.9
6,230,262	+				-1.5
6,230,262	+				-3.4
6,230,262	+				-1.9
6,230,262	+				-1.7
6,230,262	+				-0.9
6,230,262	+				-2.1
6,230,262	+				-1.9
6,230,262	+				+0.2
6,230,263	-				+0.9
6,230,263	-				+0.7
6,230,314	+				-2.5
6,230,314	+				-0.4
6,230,315	-				-1.0
6,230,315	-				-1.5
6,230,365	+				-1.1
6,230,365	+				-1.3
6,230,365	+				+0.5
6,230,365	+				-2.2
6,230,365	+				+2.8
6,230,366	-				-1.7
6,230,372	+				-0.3
6,230,372	+				-1.4
6,230,372	+				-0.5
6,230,373	-				-1.8
6,230,378	+				-1.2
6,230,378	+				+1.1
6,230,378	+				+1.1
6,230,379	-				-2.7
6,230,406	-				+0.7
6,230,441	+				-1.2
6,230,441	+				-1.6
6,230,441	+				-1.5
6,230,441	+				-2.4
6,230,441	+				+5.9
6,230,441	+				-1.5
6,230,442	-				+0.3
6,230,487	+				-2.8
6,230,487	+				-1.5
6,230,488	-				+0.3
6,230,500	+				-2.4
6,230,500	+				-1.7
6,230,500	+				+1.5
6,230,500	+				-2.1
6,230,500	+				+0.9
6,230,500	+				-2.0
6,230,500	+				+1.4
6,230,500	+				+1.9
6,230,500	+				-2.0
6,230,500	+				+0.7
6,230,500	+				-1.7
6,230,500	+				-2.4
6,230,500	+				-1.5
6,230,500	+				-0.1
6,230,500	+				-2.3
6,230,500	+				+1.3
6,230,500	+				-2.7
6,230,500	+				-2.1
6,230,500	+				+1.9
6,230,500	+				+1.9
6,230,500	+				+0.7
6,230,500	+				-0.8
6,230,500	+				-2.5
6,230,500	+				-1.5
6,230,500	+				-1.4
6,230,500	+				-2.7
6,230,500	+				-2.0
6,230,500	+				+1.7
6,230,500	+				-0.1
6,230,500	+				-0.3
6,230,501	-				+0.1
6,230,501	-				+0.3
6,230,501	-				-0.5
6,230,501	-				+2.0
6,230,501	-				-1.0
6,230,501	-				-1.7
6,230,501	-				+1.7
6,230,501	-				+4.3
6,230,501	-				-0.2
6,230,501	-				+0.4
6,230,501	-				-1.5
6,230,501	-				+0.9
6,230,501	-				+0.7
6,230,501	-				+1.4
6,230,501	-				-1.4
6,230,501	-				-2.2
6,230,501	-				-2.5
6,230,501	-				+1.3
6,230,501	-				-0.5
6,230,501	-				-1.9
6,230,501	-				-0.7
6,230,501	-				-1.7
6,230,501	-				+0.3
6,230,501	-				-1.6
6,230,501	-				-2.9
6,230,501	-				+2.9
6,230,501	-				-1.4
6,230,501	-				+0.3
6,230,501	-				-1.8
6,230,501	-				-2.3
6,230,501	-				+1.7
6,230,501	-				-0.7
6,230,501	-				+2.2
6,230,501	-				+1.3
6,230,501	-				+1.9
6,230,501	-				+1.3
6,230,501	-				+1.3
6,230,501	-				+2.3
6,230,501	-				-1.2
6,230,501	-				+2.3
6,230,501	-				-0.0
6,230,501	-				-0.9
6,230,528	+				-0.4
6,230,528	+				-0.5
6,230,529	-				-2.0
6,230,647	+		PFLU_RS27985	0.24	+0.5
6,230,647	+		PFLU_RS27985	0.24	-2.2
6,230,647	+		PFLU_RS27985	0.24	-0.3
6,230,648	-		PFLU_RS27985	0.24	-0.5
6,230,648	-		PFLU_RS27985	0.24	+0.4
6,230,648	-		PFLU_RS27985	0.24	-1.3
6,230,648	-		PFLU_RS27985	0.24	+2.0
6,230,670	+		PFLU_RS27985	0.28	+0.9
6,230,671	-		PFLU_RS27985	0.28	-2.4
6,230,671	-		PFLU_RS27985	0.28	-1.3
6,230,740	-		PFLU_RS27985	0.40	-1.6
6,230,902	+		PFLU_RS27985	0.67	-2.4
6,230,902	+		PFLU_RS27985	0.67	-1.4
6,230,902	+		PFLU_RS27985	0.67	-0.1
6,230,902	+		PFLU_RS27985	0.67	-2.3
6,230,902	+		PFLU_RS27985	0.67	-2.2
6,230,902	+		PFLU_RS27985	0.67	+2.7
6,230,903	-		PFLU_RS27985	0.67	+1.9
6,230,903	-		PFLU_RS27985	0.67	-2.1
6,230,903	-		PFLU_RS27985	0.67	+0.3
6,230,903	-		PFLU_RS27985	0.67	-0.1
6,230,903	-		PFLU_RS27985	0.67	+0.2
6,230,993	+		PFLU_RS27985	0.82	-1.0
6,230,993	+		PFLU_RS27985	0.82	+1.3
6,230,993	+		PFLU_RS27985	0.82	-0.7
6,230,993	+		PFLU_RS27985	0.82	-0.5
6,230,993	+		PFLU_RS27985	0.82	-1.2
6,230,994	-		PFLU_RS27985	0.83	+1.0
6,230,994	-		PFLU_RS27985	0.83	+0.4
6,230,994	-		PFLU_RS27985	0.83	+1.4
6,230,994	-		PFLU_RS27985	0.83	-1.3
6,230,994	-		PFLU_RS27985	0.83	+1.5
6,231,055	+				-2.9
6,231,061	+				-0.5
6,231,061	+				+0.7
6,231,061	+				+1.1
6,231,061	+				+1.7
6,231,061	+				-3.1
6,231,061	+				-2.2
6,231,061	+				+2.1
6,231,061	+				-0.9
6,231,061	+				+1.9
6,231,062	-				-0.4
6,231,062	-				+0.8
6,231,062	-				+1.9
6,231,062	-				-2.4
6,231,062	-				-0.5
6,231,062	-				-1.3
6,231,062	-				-1.0
6,231,062	-				+0.8
6,231,062	-				-0.4
6,231,062	-				-1.5
6,231,094	+				-0.3
6,231,094	+				+2.4
6,231,094	+				+1.7
6,231,094	+				+1.8
6,231,094	+				+1.1
6,231,094	+				+1.2
6,231,094	+				-1.5
6,231,095	-				-1.3
6,231,095	-				-0.4
6,231,095	-				-2.1
6,231,095	-				-1.6
6,231,095	-				-1.0
6,231,095	-				+2.8
6,231,103	+				-0.1
6,231,103	+				+3.1
6,231,103	+				-0.3
6,231,103	+				-1.5
6,231,103	+				+0.6
6,231,103	+				+0.2
6,231,103	+				+1.2
6,231,103	+				+2.1
6,231,103	+				+1.0
6,231,103	+				+0.9
6,231,103	+				+1.3
6,231,103	+				-1.7
6,231,103	+				+1.9
6,231,103	+				+1.1
6,231,103	+				-0.8
6,231,103	+				-0.5
6,231,103	+				+1.2
6,231,103	+				+1.0
6,231,104	-				-0.2
6,231,104	-				+0.5
6,231,104	-				+0.7
6,231,104	-				+1.4
6,231,104	-				-1.6
6,231,104	-				-1.6
6,231,104	-				-1.4
6,231,104	-				+0.4
6,231,104	-				-0.5
6,231,104	-				-1.0
6,231,104	-				-2.2
6,231,104	-				+1.2
6,231,104	-				+0.8
6,231,104	-				-0.1
6,231,104	-				-0.5
6,231,104	-				+0.9
6,231,104	-				+1.3
6,231,104	-				-0.3
6,231,105	+				-2.2
6,231,105	+				+3.3
6,231,106	-				+2.7
6,231,106	-				-0.5
6,231,106	-				+2.4
6,231,187	+				+1.6
6,231,187	+				-2.5
6,231,187	+				-0.9
6,231,187	+				+1.3
6,231,187	+				-2.5
6,231,187	+				+0.9
6,231,187	+				-1.2
6,231,187	+				+1.4
6,231,187	+				+3.1
6,231,187	+				-0.4
6,231,187	+				-3.0
6,231,187	+				-1.8
6,231,187	+				+1.0
6,231,188	-				+0.0
6,231,188	-				-1.5
6,231,188	-				-0.5
6,231,188	-				-1.8
6,231,188	-				+1.7
6,231,188	-				+2.1
6,231,206	+				-1.3
6,231,206	+				+1.2
6,231,206	+				-2.9
6,231,207	-				-1.6
6,231,207	-				+0.0
6,231,207	-				-0.5
6,231,235	-				-1.5
6,231,235	-				+1.1
6,231,249	+				-1.3
6,231,250	-				-1.5
6,231,492	-		PFLU_RS27990	0.19	-2.2
6,231,513	+		PFLU_RS27990	0.21	-1.2
6,231,513	+		PFLU_RS27990	0.21	+1.4
6,231,513	+		PFLU_RS27990	0.21	-1.5
6,231,513	+		PFLU_RS27990	0.21	-1.0
6,231,514	-		PFLU_RS27990	0.21	-2.4
6,231,514	-		PFLU_RS27990	0.21	+1.2
6,231,514	-		PFLU_RS27990	0.21	-0.1
6,231,514	-		PFLU_RS27990	0.21	+2.3
6,231,514	-		PFLU_RS27990	0.21	+0.3
6,231,541	+		PFLU_RS27990	0.23	+0.8
6,231,541	+		PFLU_RS27990	0.23	-0.3
6,231,541	+		PFLU_RS27990	0.23	-2.2
6,231,542	-		PFLU_RS27990	0.23	+3.0
6,231,549	+		PFLU_RS27990	0.23	+0.7
6,231,549	+		PFLU_RS27990	0.23	+1.9
6,231,549	+		PFLU_RS27990	0.23	-1.5
6,231,550	-		PFLU_RS27990	0.23	+0.7
6,231,550	-		PFLU_RS27990	0.23	-0.1
6,231,552	+		PFLU_RS27990	0.23	-2.1
6,231,552	+		PFLU_RS27990	0.23	-0.9
6,231,552	+		PFLU_RS27990	0.23	+1.7
6,231,553	-		PFLU_RS27990	0.23	+0.0
6,231,553	-		PFLU_RS27990	0.23	-1.3
6,231,553	-		PFLU_RS27990	0.23	-1.6
6,231,553	-		PFLU_RS27990	0.23	-0.7
6,231,553	-		PFLU_RS27990	0.23	-1.2
6,231,616	-		PFLU_RS27990	0.28	-2.8
6,231,616	-		PFLU_RS27990	0.28	-0.1
6,231,666	+		PFLU_RS27990	0.31	-2.0
6,231,780	+		PFLU_RS27990	0.39	+0.3
6,231,780	+		PFLU_RS27990	0.39	+1.3
6,231,781	-		PFLU_RS27990	0.39	+0.2
6,232,044	+		PFLU_RS27990	0.57	-1.2
6,232,045	-		PFLU_RS27990	0.57	-1.6
6,232,045	-		PFLU_RS27990	0.57	-0.5
6,232,045	-		PFLU_RS27990	0.57	-2.6
6,232,091	+		PFLU_RS27990	0.60	-2.3
6,232,091	+		PFLU_RS27990	0.60	+1.2
6,232,224	+		PFLU_RS27990	0.69	-1.8
6,232,224	+		PFLU_RS27990	0.69	-2.0
6,232,224	+		PFLU_RS27990	0.69	-1.8
6,232,225	-		PFLU_RS27990	0.69	-1.4
6,232,238	+		PFLU_RS27990	0.70	-1.9
6,232,238	+		PFLU_RS27990	0.70	-0.7
6,232,239	-		PFLU_RS27990	0.70	-2.1
6,232,308	+		PFLU_RS27990	0.75	-1.8
6,232,309	-		PFLU_RS27990	0.75	-1.3
6,232,309	-		PFLU_RS27990	0.75	-0.8
6,232,309	-		PFLU_RS27990	0.75	-1.2
6,232,398	+		PFLU_RS27990	0.81	-2.0
6,232,398	+		PFLU_RS27990	0.81	+1.3
6,232,399	-		PFLU_RS27990	0.81	+0.1
6,232,399	-		PFLU_RS27990	0.81	-0.8
6,232,642	+				+0.1
6,232,663	-				-1.1
6,232,677	+				+0.9
6,232,677	+				-0.5
6,232,677	+				+0.9
6,232,677	+				-1.6
6,232,677	+				-1.1
6,232,677	+				+0.8
6,232,677	+				-0.8
6,232,677	+				-0.9
6,232,677	+				+1.0
6,232,677	+				+0.9
6,232,678	-				+1.4
6,232,678	-				+2.9
6,232,678	-				-0.7
6,232,693	+				+0.2
6,232,694	-				-0.5
6,232,694	-				-1.0
6,232,746	+				+0.1
6,232,821	+				-0.7
6,232,821	+				-2.4
6,232,821	+				+1.3
6,232,821	+				-1.3
6,232,821	+				-1.0
6,232,821	+				+2.0
6,232,821	+				+1.8
6,232,821	+				-0.8
6,232,821	+				-2.5
6,232,821	+				+1.6
6,232,821	+				-0.4
6,232,821	+				-0.7
6,232,822	-				-1.0
6,232,822	-				-0.9
6,232,822	-				-2.4
6,232,822	-				+0.4
6,232,822	-				+1.9
6,232,822	-				+1.1
6,232,822	-				-0.1
6,232,822	-				+0.9
6,232,822	-				-2.5
6,232,822	-				-1.5
6,232,822	-				-3.3
6,232,822	-				-0.5
6,232,834	+				+1.1
6,232,835	-				-0.5
6,232,840	+				+1.5
6,232,840	+				-0.9
6,232,840	+				+1.7
6,232,840	+				+1.1
6,232,840	+				+2.0
6,232,840	+				-1.9
6,232,840	+				-1.5
6,232,840	+				-2.6
6,232,840	+				-1.2
6,232,840	+				+0.2
6,232,840	+				+0.6
6,232,840	+				-2.3
6,232,841	-				+0.6
6,232,841	-				+1.6
6,232,841	-				-1.1
6,232,841	-				-1.7
6,232,841	-				-0.1
6,232,841	-				-0.1
6,232,841	-				-2.3
6,232,841	-				+2.7
6,232,841	-				-2.3
6,232,841	-				-2.0
6,232,841	-				-1.1
6,232,841	-				-1.8
6,232,841	-				+2.6
6,232,841	-				-0.9
6,232,841	-				-1.3
6,232,841	-				-1.8
6,232,841	-				+2.0
6,232,841	-				+0.3
6,232,841	-				-0.7
6,232,841	-				-1.4
6,233,017	+		PFLU_RS27995	0.11	-0.6
6,233,017	+		PFLU_RS27995	0.11	-1.8
6,233,113	+		PFLU_RS27995	0.17	+0.7
6,233,113	+		PFLU_RS27995	0.17	-3.1
6,233,113	+		PFLU_RS27995	0.17	-1.5
6,233,113	+		PFLU_RS27995	0.17	+2.6
6,233,113	+		PFLU_RS27995	0.17	+0.2
6,233,113	+		PFLU_RS27995	0.17	-2.3
6,233,113	+		PFLU_RS27995	0.17	-1.7
6,233,113	+		PFLU_RS27995	0.17	-0.0
6,233,113	+		PFLU_RS27995	0.17	-1.0
6,233,113	+		PFLU_RS27995	0.17	+0.1
6,233,113	+		PFLU_RS27995	0.17	-0.1
6,233,113	+		PFLU_RS27995	0.17	-0.5
6,233,113	+		PFLU_RS27995	0.17	-2.1
6,233,113	+		PFLU_RS27995	0.17	-3.6
6,233,113	+		PFLU_RS27995	0.17	+1.5
6,233,113	+		PFLU_RS27995	0.17	-1.1
6,233,113	+		PFLU_RS27995	0.17	-1.7
6,233,113	+		PFLU_RS27995	0.17	+0.6
6,233,113	+		PFLU_RS27995	0.17	+2.2
6,233,113	+		PFLU_RS27995	0.17	-0.7
6,233,113	+		PFLU_RS27995	0.17	-2.8
6,233,113	+		PFLU_RS27995	0.17	+0.1
6,233,113	+		PFLU_RS27995	0.17	+1.5
6,233,114	-		PFLU_RS27995	0.17	+1.1
6,233,114	-		PFLU_RS27995	0.17	+0.2
6,233,114	-		PFLU_RS27995	0.17	-1.5
6,233,114	-		PFLU_RS27995	0.17	+0.9
6,233,114	-		PFLU_RS27995	0.17	+2.2
6,233,114	-		PFLU_RS27995	0.17	+0.7
6,233,114	-		PFLU_RS27995	0.17	-1.0
6,233,114	-		PFLU_RS27995	0.17	+0.9
6,233,114	-		PFLU_RS27995	0.17	+0.4
6,233,114	-		PFLU_RS27995	0.17	-1.5
6,233,114	-		PFLU_RS27995	0.17	-2.6
6,233,114	-		PFLU_RS27995	0.17	+1.0
6,233,114	-		PFLU_RS27995	0.17	+1.6
6,233,137	+		PFLU_RS27995	0.18	-2.3
6,233,137	+		PFLU_RS27995	0.18	-2.4
6,233,137	+		PFLU_RS27995	0.18	+1.1
6,233,138	-		PFLU_RS27995	0.19	+0.8
6,233,138	-		PFLU_RS27995	0.19	-3.6
6,233,179	+		PFLU_RS27995	0.21	-1.1
6,233,179	+		PFLU_RS27995	0.21	+0.9
6,233,179	+		PFLU_RS27995	0.21	-1.8
6,233,179	+		PFLU_RS27995	0.21	+2.9
6,233,179	+		PFLU_RS27995	0.21	+3.5
6,233,179	+		PFLU_RS27995	0.21	+0.9
6,233,180	-		PFLU_RS27995	0.21	+0.1
6,233,180	-		PFLU_RS27995	0.21	-1.4
6,233,180	-		PFLU_RS27995	0.21	-1.9
6,233,180	-		PFLU_RS27995	0.21	-0.8
6,233,180	-		PFLU_RS27995	0.21	-1.1
6,233,180	-		PFLU_RS27995	0.21	-0.8
6,233,180	-		PFLU_RS27995	0.21	-1.5
6,233,180	-		PFLU_RS27995	0.21	+2.9
6,233,180	-		PFLU_RS27995	0.21	-0.1
6,233,180	-		PFLU_RS27995	0.21	+0.8
6,233,180	-		PFLU_RS27995	0.21	+1.7
6,233,180	-		PFLU_RS27995	0.21	-1.3
6,233,197	+		PFLU_RS27995	0.22	+1.3
6,233,198	-		PFLU_RS27995	0.22	-1.6
6,233,239	+		PFLU_RS27995	0.24	+0.1
6,233,240	-		PFLU_RS27995	0.25	-1.0
6,233,394	+		PFLU_RS27995	0.34	+2.7
6,233,536	+		PFLU_RS27995	0.42	+1.3