Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS17040

Experiment: Glycine betaine (C)(N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glycine betaine (C)(N); with MOPS
3,863,972	+		PFLU_RS17035	0.18	-2.6
3,863,972	+		PFLU_RS17035	0.18	-0.7
3,863,973	-		PFLU_RS17035	0.18	+1.7
3,863,973	-		PFLU_RS17035	0.18	+0.9
3,864,308	+		PFLU_RS17035	0.53	+0.9
3,864,308	+		PFLU_RS17035	0.53	+1.2
3,864,309	-		PFLU_RS17035	0.53	-1.1
3,864,309	-		PFLU_RS17035	0.53	-1.3
3,864,309	-		PFLU_RS17035	0.53	+0.1
3,864,309	-		PFLU_RS17035	0.53	+2.1
3,864,309	-		PFLU_RS17035	0.53	-2.2
3,864,342	-		PFLU_RS17035	0.57	-2.6
3,864,342	-		PFLU_RS17035	0.57	-1.5
3,864,342	-		PFLU_RS17035	0.57	-0.7
3,864,342	-		PFLU_RS17035	0.57	-0.5
3,864,342	-		PFLU_RS17035	0.57	-1.5
3,864,347	+		PFLU_RS17035	0.57	-1.7
3,864,347	+		PFLU_RS17035	0.57	-3.3
3,864,347	+		PFLU_RS17035	0.57	-1.3
3,864,347	+		PFLU_RS17035	0.57	-2.0
3,864,347	+		PFLU_RS17035	0.57	-0.1
3,864,348	-		PFLU_RS17035	0.57	-2.0
3,864,348	-		PFLU_RS17035	0.57	+0.4
3,864,348	-		PFLU_RS17035	0.57	-2.2
3,864,348	-		PFLU_RS17035	0.57	+3.8
3,864,470	+		PFLU_RS17035	0.70	-1.6
3,864,471	-		PFLU_RS17035	0.70	-1.6
3,864,471	-		PFLU_RS17035	0.70	+1.8
3,864,471	-		PFLU_RS17035	0.70	-2.3
3,864,613	+		PFLU_RS17035	0.85	-0.9
3,864,614	-		PFLU_RS17035	0.85	-2.5
3,864,614	-		PFLU_RS17035	0.85	-0.3
3,864,694	-				+1.1
3,864,694	-				+1.3
3,864,748	+				+2.3
3,864,748	+				+1.5
3,864,748	+				+1.8
3,864,749	-				-1.4
3,864,749	-				+0.2
3,864,749	-				+1.5
3,864,788	+				-0.4
3,864,793	+				+0.1
3,864,793	+				+0.9
3,864,793	+				+0.1
3,864,793	+				-1.7
3,864,793	+				+1.1
3,864,793	+				+0.2
3,864,793	+				-1.5
3,864,793	+				+0.5
3,864,793	+				-1.1
3,864,793	+				-2.3
3,864,794	-				-2.2
3,864,794	-				-1.3
3,864,794	-				+2.7
3,864,794	-				+2.6
3,864,794	-				+4.4
3,864,794	-				-1.9
3,864,794	-				-2.3
3,864,794	-				-2.4
3,864,794	-				+0.5
3,864,794	-				-0.3
3,864,794	-				+1.8
3,864,794	-				+0.5
3,864,794	-				-0.3
3,864,796	+				-1.4
3,864,797	-				+0.3
3,864,797	-				+0.1
3,864,797	-				+0.9
3,864,797	-				-2.6
3,864,797	-				+0.7
3,864,797	-				+0.7
3,864,848	-				+0.9
3,864,861	+				+2.2
3,864,862	-				+0.1
3,864,867	-				-1.3
3,864,867	-				+2.1
3,864,879	+				-0.3
3,864,879	+				-3.1
3,864,879	+				-1.1
3,864,954	-				+0.4
3,865,031	+		PFLU_RS17040	0.14	+0.4
3,865,031	+		PFLU_RS17040	0.14	+2.3
3,865,031	+		PFLU_RS17040	0.14	+2.1
3,865,032	-		PFLU_RS17040	0.14	+2.1
3,865,122	-		PFLU_RS17040	0.22	-2.5
3,865,172	+		PFLU_RS17040	0.27	+0.3
3,865,172	+		PFLU_RS17040	0.27	+1.8
3,865,172	+		PFLU_RS17040	0.27	-0.6
3,865,172	+		PFLU_RS17040	0.27	-2.4
3,865,173	-		PFLU_RS17040	0.27	-3.0
3,865,173	-		PFLU_RS17040	0.27	-1.4
3,865,173	-		PFLU_RS17040	0.27	-0.3
3,865,173	-		PFLU_RS17040	0.27	+2.0
3,865,173	-		PFLU_RS17040	0.27	-0.7
3,865,173	-		PFLU_RS17040	0.27	-2.5
3,865,173	-		PFLU_RS17040	0.27	+1.2
3,865,173	-		PFLU_RS17040	0.27	-2.0
3,865,173	-		PFLU_RS17040	0.27	+2.1
3,865,173	-		PFLU_RS17040	0.27	+3.5
3,865,173	-		PFLU_RS17040	0.27	-1.1
3,865,214	+		PFLU_RS17040	0.31	+1.2
3,865,214	+		PFLU_RS17040	0.31	-1.9
3,865,214	+		PFLU_RS17040	0.31	+3.1
3,865,214	+		PFLU_RS17040	0.31	+2.1
3,865,214	+		PFLU_RS17040	0.31	-3.0
3,865,214	+		PFLU_RS17040	0.31	+2.4
3,865,214	+		PFLU_RS17040	0.31	+0.6
3,865,214	+		PFLU_RS17040	0.31	-1.6
3,865,215	-		PFLU_RS17040	0.31	+2.9
3,865,215	-		PFLU_RS17040	0.31	+2.2
3,865,215	-		PFLU_RS17040	0.31	-0.7
3,865,215	-		PFLU_RS17040	0.31	+0.1
3,865,215	-		PFLU_RS17040	0.31	-0.3
3,865,215	-		PFLU_RS17040	0.31	-0.7
3,865,215	-		PFLU_RS17040	0.31	-1.1
3,865,215	-		PFLU_RS17040	0.31	-0.3
3,865,318	+		PFLU_RS17040	0.41	-0.3
3,865,318	+		PFLU_RS17040	0.41	-2.6
3,865,319	-		PFLU_RS17040	0.41	-0.4
3,865,319	-		PFLU_RS17040	0.41	+0.1
3,865,388	+		PFLU_RS17040	0.47	+0.5
3,865,389	-		PFLU_RS17040	0.47	+0.1
3,865,389	-		PFLU_RS17040	0.47	-2.8
3,865,389	-		PFLU_RS17040	0.47	+0.8
3,865,532	+		PFLU_RS17040	0.61	+0.1
3,865,533	-		PFLU_RS17040	0.61	-1.9
3,865,649	+		PFLU_RS17040	0.72	-1.8
3,865,649	+		PFLU_RS17040	0.72	+1.8
3,865,745	+		PFLU_RS17040	0.81	-0.9
3,865,746	-		PFLU_RS17040	0.81	+2.6
3,865,746	-		PFLU_RS17040	0.81	-1.5
3,865,748	+		PFLU_RS17040	0.81	+1.6
3,865,748	+		PFLU_RS17040	0.81	-1.1
3,865,748	+		PFLU_RS17040	0.81	+3.2
3,865,749	-		PFLU_RS17040	0.81	+0.7
3,865,749	-		PFLU_RS17040	0.81	+0.1
3,865,749	-		PFLU_RS17040	0.81	-0.7
3,865,749	-		PFLU_RS17040	0.81	-2.0
3,865,790	+		PFLU_RS17040	0.85	+0.9
3,865,790	+		PFLU_RS17040	0.85	-0.7
3,865,790	+		PFLU_RS17040	0.85	-2.4
3,865,790	+		PFLU_RS17040	0.85	-2.8
3,865,790	+		PFLU_RS17040	0.85	-1.4
3,865,790	+		PFLU_RS17040	0.85	-0.5
3,865,790	+		PFLU_RS17040	0.85	-1.7
3,865,791	-		PFLU_RS17040	0.85	-0.7
3,865,791	-		PFLU_RS17040	0.85	-2.0
3,865,791	-		PFLU_RS17040	0.85	-2.2
3,865,791	-		PFLU_RS17040	0.85	+1.6
3,865,791	-		PFLU_RS17040	0.85	+0.7
3,865,791	-		PFLU_RS17040	0.85	-2.7
3,865,791	-		PFLU_RS17040	0.85	-2.7
3,865,793	+		PFLU_RS17040	0.85	-0.7
3,865,793	+		PFLU_RS17040	0.85	+0.5
3,865,793	+		PFLU_RS17040	0.85	+0.5
3,865,794	-		PFLU_RS17040	0.85	+3.2
3,865,794	-		PFLU_RS17040	0.85	+0.9
3,865,794	-		PFLU_RS17040	0.85	-1.4
3,865,794	-		PFLU_RS17040	0.85	-2.3
3,865,794	-		PFLU_RS17040	0.85	+0.5
3,865,794	-		PFLU_RS17040	0.85	-1.3
3,865,794	-		PFLU_RS17040	0.85	-2.3
3,865,794	-		PFLU_RS17040	0.85	-0.6
3,865,799	+		PFLU_RS17040	0.86	-0.3
3,865,799	+		PFLU_RS17040	0.86	-1.1
3,865,799	+		PFLU_RS17040	0.86	-2.6
3,865,799	+		PFLU_RS17040	0.86	-2.2
3,865,800	-		PFLU_RS17040	0.86	-2.6
3,865,838	+		PFLU_RS17040	0.89	-1.1
3,865,838	+		PFLU_RS17040	0.89	-0.9
3,865,838	+		PFLU_RS17040	0.89	+3.1
3,865,838	+		PFLU_RS17040	0.89	+0.3
3,865,839	-		PFLU_RS17040	0.89	+1.4
3,865,839	-		PFLU_RS17040	0.89	-1.6
3,865,839	-		PFLU_RS17040	0.89	-2.8
3,865,839	-		PFLU_RS17040	0.89	-2.0
3,865,839	-		PFLU_RS17040	0.89	+3.1
3,865,839	-		PFLU_RS17040	0.89	-2.5
3,865,839	-		PFLU_RS17040	0.89	-1.1
3,865,839	-		PFLU_RS17040	0.89	-1.2
3,865,839	-		PFLU_RS17040	0.89	-1.7
3,866,206	+		PFLU_RS17045	0.30	+1.9
3,866,206	+		PFLU_RS17045	0.30	-1.3
3,866,206	+		PFLU_RS17045	0.30	+1.1
3,866,207	-		PFLU_RS17045	0.30	-1.6
3,866,207	-		PFLU_RS17045	0.30	-1.5
3,866,244	-		PFLU_RS17045	0.35	-1.9
3,866,344	-		PFLU_RS17045	0.48	-1.5
3,866,344	-		PFLU_RS17045	0.48	+1.1
3,866,454	+		PFLU_RS17045	0.62	-3.5
3,866,454	+		PFLU_RS17045	0.62	+1.6
3,866,455	-		PFLU_RS17045	0.63	+1.8
3,866,455	-		PFLU_RS17045	0.63	+1.4
3,866,455	-		PFLU_RS17045	0.63	-1.8
3,866,455	-		PFLU_RS17045	0.63	-1.1
3,866,694	+				+0.6
3,866,694	+				-1.5
3,866,695	-				+2.1
3,866,695	-				-0.7
3,866,695	-				-1.2