Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS06175

Experiment: Glycine betaine (C)(N); with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glycine betaine (C)(N); with MOPS
1,378,904	+				-1.5
1,378,904	+				+2.8
1,378,904	+				-1.9
1,378,905	-				-0.7
1,378,931	+				-1.7
1,378,932	-				+1.1
1,378,932	-				-1.5
1,378,932	-				-0.7
1,378,932	-				+2.2
1,378,932	-				-0.4
1,378,945	+				+0.9
1,378,945	+				-1.5
1,378,945	+				+1.3
1,378,946	-				+2.2
1,378,948	+				-2.2
1,378,960	+				+1.3
1,378,960	+				-3.3
1,378,961	-				-1.3
1,379,200	+		PFLU_RS06170	0.30	+1.1
1,379,200	+		PFLU_RS06170	0.30	-1.4
1,379,200	+		PFLU_RS06170	0.30	-1.5
1,379,200	+		PFLU_RS06170	0.30	-1.6
1,379,201	-		PFLU_RS06170	0.30	-1.8
1,379,201	-		PFLU_RS06170	0.30	+1.2
1,379,497	+		PFLU_RS06170	0.67	-1.9
1,379,497	+		PFLU_RS06170	0.67	-1.1
1,379,497	+		PFLU_RS06170	0.67	-1.1
1,379,497	+		PFLU_RS06170	0.67	-0.5
1,379,497	+		PFLU_RS06170	0.67	-2.3
1,379,497	+		PFLU_RS06170	0.67	-1.4
1,379,497	+		PFLU_RS06170	0.67	+0.6
1,379,497	+		PFLU_RS06170	0.67	-1.4
1,379,497	+		PFLU_RS06170	0.67	-1.5
1,379,497	+		PFLU_RS06170	0.67	-0.4
1,379,498	-		PFLU_RS06170	0.68	-2.0
1,379,498	-		PFLU_RS06170	0.68	+0.8
1,379,498	-		PFLU_RS06170	0.68	-1.7
1,379,498	-		PFLU_RS06170	0.68	-2.2
1,379,498	-		PFLU_RS06170	0.68	-1.6
1,379,498	-		PFLU_RS06170	0.68	+2.2
1,379,498	-		PFLU_RS06170	0.68	+0.9
1,379,498	-		PFLU_RS06170	0.68	-1.2
1,379,498	-		PFLU_RS06170	0.68	+0.8
1,379,725	+				+0.0
1,379,725	+				-2.0
1,379,725	+				+1.2
1,379,726	-				-2.1
1,379,726	-				+1.8
1,379,794	+				-0.4
1,379,807	+				-1.1
1,379,807	+				+1.0
1,379,807	+				+0.8
1,379,807	+				+1.4
1,379,811	+				+2.6
1,379,811	+				-1.5
1,379,811	+				-0.5
1,379,811	+				+1.6
1,379,811	+				+1.0
1,379,812	-				+0.0
1,379,812	-				-1.0
1,379,812	-				+2.7
1,379,812	-				+1.5
1,379,812	-				-1.4
1,379,812	-				-2.4
1,379,812	-				+2.3
1,379,812	-				+1.6
1,379,812	-				-1.3
1,379,883	+				-1.2
1,379,884	-				+1.2
1,379,892	+				-2.7
1,379,892	+				-0.2
1,379,892	+				+0.0
1,379,892	+				-1.8
1,379,902	+				-1.3
1,379,903	-				+0.5
1,379,903	-				-1.8
1,379,903	-				+0.7
1,379,903	-				+0.2
1,379,924	+				-2.8
1,379,924	+				-0.7
1,379,924	+				+3.2
1,379,924	+				+1.0
1,379,924	+				-1.2
1,379,924	+				-2.0
1,379,924	+				+1.3
1,379,924	+				-1.8
1,379,924	+				+2.9
1,379,924	+				-0.7
1,379,924	+				-0.1
1,379,924	+				-2.1
1,379,924	+				-1.9
1,379,924	+				+0.0
1,379,924	+				-0.5
1,379,924	+				+1.2
1,379,924	+				+0.9
1,379,924	+				-2.4
1,379,924	+				-0.5
1,379,924	+				-0.8
1,379,924	+				-0.5
1,379,924	+				-0.8
1,379,924	+				+0.9
1,379,924	+				+1.7
1,379,924	+				-1.9
1,379,924	+				-1.9
1,379,924	+				-1.4
1,379,924	+				+0.4
1,379,925	-				-1.2
1,379,925	-				+1.9
1,379,925	-				+2.1
1,379,925	-				-1.9
1,379,925	-				+1.1
1,379,925	-				-1.0
1,379,925	-				-3.1
1,379,925	-				-2.0
1,379,925	-				-2.1
1,379,925	-				-1.8
1,379,925	-				+1.9
1,379,925	-				-2.7
1,379,925	-				-2.7
1,379,925	-				+0.7
1,379,925	-				-1.3
1,379,925	-				+2.8
1,379,925	-				-0.1
1,379,925	-				-2.5
1,379,925	-				-0.2
1,379,925	-				+2.4
1,379,925	-				-2.2
1,379,925	-				+3.0
1,379,925	-				+0.3
1,379,925	-				+2.3
1,379,970	+		PFLU_RS06175	0.14	+3.0
1,379,970	+		PFLU_RS06175	0.14	-1.2
1,379,970	+		PFLU_RS06175	0.14	+0.9
1,379,970	+		PFLU_RS06175	0.14	+1.6
1,379,970	+		PFLU_RS06175	0.14	+0.5
1,379,970	+		PFLU_RS06175	0.14	+1.2
1,379,971	-		PFLU_RS06175	0.14	+2.1
1,379,971	-		PFLU_RS06175	0.14	+1.3
1,380,273	+		PFLU_RS06175	0.61	+1.2
1,380,273	+		PFLU_RS06175	0.61	-0.2
1,380,273	+		PFLU_RS06175	0.61	+0.0
1,380,273	+		PFLU_RS06175	0.61	-1.1
1,380,273	+		PFLU_RS06175	0.61	+1.0
1,380,273	+		PFLU_RS06175	0.61	-2.2
1,380,273	+		PFLU_RS06175	0.61	+0.9
1,380,273	+		PFLU_RS06175	0.61	-1.2
1,380,274	-		PFLU_RS06175	0.62	-2.7
1,380,274	-		PFLU_RS06175	0.62	-3.1
1,380,274	-		PFLU_RS06175	0.62	-1.5
1,380,274	-		PFLU_RS06175	0.62	+1.2
1,380,274	-		PFLU_RS06175	0.62	+1.6
1,380,274	-		PFLU_RS06175	0.62	-0.7
1,380,274	-		PFLU_RS06175	0.62	+0.6
1,380,274	-		PFLU_RS06175	0.62	-0.7
1,380,274	-		PFLU_RS06175	0.62	+1.4
1,380,274	-		PFLU_RS06175	0.62	+0.2
1,380,274	-		PFLU_RS06175	0.62	-2.1
1,380,323	+		PFLU_RS06175	0.69	+0.0
1,380,323	+		PFLU_RS06175	0.69	+0.5
1,380,323	+		PFLU_RS06175	0.69	-2.8
1,380,324	-		PFLU_RS06175	0.69	-0.1
1,380,324	-		PFLU_RS06175	0.69	+0.9
1,380,334	+		PFLU_RS06175	0.71	-1.7
1,380,351	+		PFLU_RS06175	0.74	-1.5
1,380,351	+		PFLU_RS06175	0.74	+2.7
1,380,351	+		PFLU_RS06175	0.74	-1.1
1,380,351	+		PFLU_RS06175	0.74	+0.3
1,380,351	+		PFLU_RS06175	0.74	+0.2
1,380,351	+		PFLU_RS06175	0.74	-0.5
1,380,351	+		PFLU_RS06175	0.74	+1.5
1,380,352	-		PFLU_RS06175	0.74	-0.7
1,380,352	-		PFLU_RS06175	0.74	+1.2
1,380,352	-		PFLU_RS06175	0.74	-1.2
1,380,352	-		PFLU_RS06175	0.74	+3.2
1,380,352	-		PFLU_RS06175	0.74	+2.4
1,380,352	-		PFLU_RS06175	0.74	+0.0
1,380,403	+		PFLU_RS06175	0.82	-1.7
1,380,411	+		PFLU_RS06175	0.83	-2.6
1,380,491	-				+0.1
1,380,491	-				-2.0
1,380,550	+				-2.5
1,380,553	+				+1.4
1,380,553	+				+1.1
1,380,553	+				+0.7
1,380,553	+				-2.9
1,380,553	+				+1.7
1,380,553	+				-1.4
1,380,553	+				-2.1
1,380,554	-				-0.7
1,380,554	-				+2.2
1,380,556	+				+3.5
1,380,556	+				-2.1
1,380,556	+				+0.6
1,380,556	+				+1.9
1,380,557	-				+1.9
1,380,557	-				-0.2
1,380,557	-				+1.5
1,380,561	+				+0.0
1,380,562	-				+0.4
1,380,562	-				+4.5
1,380,562	-				-1.8
1,380,571	+				+1.5
1,380,573	+				+1.1
1,380,573	+				+1.2
1,380,573	+				+0.4
1,380,573	+				+1.5
1,380,573	+				-1.4
1,380,573	+				+1.4
1,380,573	+				+0.3
1,380,574	-				+0.9
1,380,574	-				-2.6
1,380,574	-				+0.4
1,380,574	-				-1.5
1,380,574	-				-0.5
1,380,574	-				-0.4
1,380,574	-				-2.5
1,380,577	+				+0.3
1,380,577	+				+0.4
1,380,577	+				+1.1
1,380,577	+				-1.7
1,380,577	+				-1.6
1,380,577	+				-1.9
1,380,577	+				+1.5
1,380,577	+				+0.8
1,380,578	-				-2.6
1,380,578	-				-0.5
1,380,578	-				-1.0
1,380,578	-				-2.2
1,380,578	-				+0.0
1,380,578	-				-1.2
1,380,578	-				-2.0
1,380,583	+				+0.0
1,380,606	+				+0.2
1,380,606	+				-2.2
1,380,606	+				-1.3
1,380,607	-				+1.6
1,380,607	-				+1.4
1,380,607	-				-1.8
1,380,662	-				-2.9
1,380,757	-		PFLU_RS06180	0.13	-1.1
1,380,780	+		PFLU_RS06180	0.15	-1.3
1,380,781	-		PFLU_RS06180	0.15	-0.5
1,380,781	-		PFLU_RS06180	0.15	+1.8
1,380,781	-		PFLU_RS06180	0.15	+0.1
1,380,822	-		PFLU_RS06180	0.19	-1.2
1,380,822	-		PFLU_RS06180	0.19	-1.8
1,380,975	+		PFLU_RS06180	0.33	+1.5
1,380,975	+		PFLU_RS06180	0.33	+1.3
1,380,975	+		PFLU_RS06180	0.33	+2.4
1,380,975	+		PFLU_RS06180	0.33	-2.4
1,380,975	+		PFLU_RS06180	0.33	+1.2
1,380,976	-		PFLU_RS06180	0.33	-2.0
1,380,976	-		PFLU_RS06180	0.33	+1.5
1,380,976	-		PFLU_RS06180	0.33	-0.3
1,380,976	-		PFLU_RS06180	0.33	-1.9
1,381,017	+		PFLU_RS06180	0.37	-1.0
1,381,018	-		PFLU_RS06180	0.37	-0.5
1,381,038	+		PFLU_RS06180	0.39	-2.0
1,381,040	+		PFLU_RS06180	0.39	+1.0
1,381,040	+		PFLU_RS06180	0.39	-2.3
1,381,040	+		PFLU_RS06180	0.39	+0.4
1,381,040	+		PFLU_RS06180	0.39	-1.2
1,381,040	+		PFLU_RS06180	0.39	-2.0
1,381,040	+		PFLU_RS06180	0.39	-2.9
1,381,040	+		PFLU_RS06180	0.39	+0.6
1,381,040	+		PFLU_RS06180	0.39	-0.5
1,381,040	+		PFLU_RS06180	0.39	+1.0
1,381,040	+		PFLU_RS06180	0.39	+1.4
1,381,040	+		PFLU_RS06180	0.39	+1.6
1,381,040	+		PFLU_RS06180	0.39	+0.9
1,381,040	+		PFLU_RS06180	0.39	+0.8
1,381,040	+		PFLU_RS06180	0.39	-0.4
1,381,040	+		PFLU_RS06180	0.39	-1.8
1,381,040	+		PFLU_RS06180	0.39	+1.8
1,381,040	+		PFLU_RS06180	0.39	+0.5
1,381,040	+		PFLU_RS06180	0.39	+1.0
1,381,041	-		PFLU_RS06180	0.39	-1.5
1,381,041	-		PFLU_RS06180	0.39	-2.0
1,381,041	-		PFLU_RS06180	0.39	+1.9
1,381,041	-		PFLU_RS06180	0.39	-2.9
1,381,041	-		PFLU_RS06180	0.39	+0.9
1,381,041	-		PFLU_RS06180	0.39	-3.1
1,381,041	-		PFLU_RS06180	0.39	+0.0
1,381,041	-		PFLU_RS06180	0.39	+1.0
1,381,041	-		PFLU_RS06180	0.39	-1.4
1,381,041	-		PFLU_RS06180	0.39	+3.1
1,381,041	-		PFLU_RS06180	0.39	-2.4
1,381,041	-		PFLU_RS06180	0.39	+0.6
1,381,041	-		PFLU_RS06180	0.39	-1.1
1,381,041	-		PFLU_RS06180	0.39	-0.2
1,381,041	-		PFLU_RS06180	0.39	+0.5
1,381,041	-		PFLU_RS06180	0.39	+0.0
1,381,041	-		PFLU_RS06180	0.39	-0.2
1,381,041	-		PFLU_RS06180	0.39	+1.4
1,381,041	-		PFLU_RS06180	0.39	+1.6
1,381,041	-		PFLU_RS06180	0.39	-2.0
1,381,041	-		PFLU_RS06180	0.39	-1.7
1,381,041	-		PFLU_RS06180	0.39	-1.5
1,381,107	+		PFLU_RS06180	0.45	-0.4
1,381,141	+		PFLU_RS06180	0.48	+0.9
1,381,325	+		PFLU_RS06180	0.65	-1.5
1,381,325	+		PFLU_RS06180	0.65	-0.1
1,381,432	+		PFLU_RS06180	0.74	-3.0
1,381,432	+		PFLU_RS06180	0.74	+1.0
1,381,432	+		PFLU_RS06180	0.74	-1.5
1,381,432	+		PFLU_RS06180	0.74	-0.2
1,381,432	+		PFLU_RS06180	0.74	+0.2
1,381,438	+		PFLU_RS06180	0.75	+0.6
1,381,438	+		PFLU_RS06180	0.75	-2.0
1,381,454	+		PFLU_RS06180	0.76	+2.5
1,381,455	-		PFLU_RS06180	0.77	+0.0
1,381,455	-		PFLU_RS06180	0.77	+0.9
1,381,506	+		PFLU_RS06180	0.81	+1.0
1,381,506	+		PFLU_RS06180	0.81	+1.5
1,381,506	+		PFLU_RS06180	0.81	-2.0
1,381,506	+		PFLU_RS06180	0.81	+0.2
1,381,506	+		PFLU_RS06180	0.81	-2.5
1,381,506	+		PFLU_RS06180	0.81	-0.8
1,381,507	-		PFLU_RS06180	0.81	-0.0
1,381,507	-		PFLU_RS06180	0.81	-1.9
1,381,507	-		PFLU_RS06180	0.81	+0.6
1,381,507	-		PFLU_RS06180	0.81	-0.4