Experiment: Glycine betaine (C)(N); with MOPS
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS02515 and PFLU_RS02520 are separated by 63 nucleotides PFLU_RS02520 and PFLU_RS02525 are separated by 286 nucleotides
PFLU_RS02515: PFLU_RS02515 - flagellar motor protein MotB, at 578,813 to 579,832
_RS02515
PFLU_RS02520: PFLU_RS02520 - hypothetical protein, at 579,896 to 580,291
_RS02520
PFLU_RS02525: PFLU_RS02525 - small ribosomal subunit biogenesis GTPase RsgA, at 580,578 to 581,609
_RS02525
Position (kb) 579
580
581 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 578.987 kb on + strand, within PFLU_RS02515 at 578.987 kb on + strand, within PFLU_RS02515 at 578.987 kb on + strand, within PFLU_RS02515 at 578.987 kb on + strand, within PFLU_RS02515 at 578.988 kb on - strand, within PFLU_RS02515 at 578.988 kb on - strand, within PFLU_RS02515 at 579.076 kb on + strand, within PFLU_RS02515 at 579.076 kb on + strand, within PFLU_RS02515 at 579.077 kb on - strand, within PFLU_RS02515 at 579.077 kb on - strand, within PFLU_RS02515 at 579.077 kb on - strand, within PFLU_RS02515 at 579.342 kb on - strand, within PFLU_RS02515 at 579.432 kb on - strand, within PFLU_RS02515 at 579.432 kb on - strand, within PFLU_RS02515 at 579.432 kb on - strand, within PFLU_RS02515 at 579.515 kb on + strand, within PFLU_RS02515 at 579.808 kb on + strand at 579.808 kb on + strand at 579.808 kb on + strand at 579.808 kb on + strand at 579.808 kb on + strand at 579.808 kb on + strand at 579.808 kb on + strand at 579.808 kb on + strand at 579.809 kb on - strand at 579.809 kb on - strand at 579.809 kb on - strand at 579.809 kb on - strand at 579.817 kb on + strand at 579.817 kb on + strand at 579.817 kb on + strand at 579.817 kb on + strand at 579.817 kb on + strand at 579.818 kb on - strand at 579.830 kb on + strand at 579.831 kb on - strand at 579.831 kb on - strand at 579.831 kb on - strand at 579.831 kb on - strand at 579.842 kb on + strand at 579.842 kb on + strand at 579.842 kb on + strand at 579.843 kb on - strand at 579.843 kb on - strand at 579.843 kb on - strand at 579.843 kb on - strand at 579.843 kb on - strand at 579.843 kb on - strand at 579.843 kb on - strand at 579.843 kb on - strand at 579.843 kb on - strand at 579.843 kb on - strand at 579.843 kb on - strand at 579.843 kb on - strand at 579.843 kb on - strand at 579.844 kb on + strand at 579.844 kb on + strand at 579.844 kb on + strand at 579.845 kb on - strand at 579.845 kb on - strand at 579.858 kb on + strand at 579.859 kb on - strand at 579.859 kb on - strand at 579.859 kb on - strand at 579.909 kb on + strand at 579.909 kb on + strand at 579.909 kb on + strand at 579.909 kb on + strand at 579.909 kb on + strand at 579.909 kb on + strand at 579.909 kb on + strand at 579.910 kb on - strand at 579.910 kb on - strand at 579.969 kb on + strand, within PFLU_RS02520 at 579.970 kb on - strand, within PFLU_RS02520 at 579.997 kb on + strand, within PFLU_RS02520 at 579.997 kb on + strand, within PFLU_RS02520 at 579.997 kb on + strand, within PFLU_RS02520 at 579.998 kb on - strand, within PFLU_RS02520 at 580.030 kb on + strand, within PFLU_RS02520 at 580.030 kb on + strand, within PFLU_RS02520 at 580.030 kb on + strand, within PFLU_RS02520 at 580.030 kb on + strand, within PFLU_RS02520 at 580.031 kb on - strand, within PFLU_RS02520 at 580.031 kb on - strand, within PFLU_RS02520 at 580.032 kb on + strand, within PFLU_RS02520 at 580.032 kb on + strand, within PFLU_RS02520 at 580.032 kb on + strand, within PFLU_RS02520 at 580.032 kb on + strand, within PFLU_RS02520 at 580.032 kb on + strand, within PFLU_RS02520 at 580.032 kb on + strand, within PFLU_RS02520 at 580.032 kb on + strand, within PFLU_RS02520 at 580.032 kb on + strand, within PFLU_RS02520 at 580.032 kb on + strand, within PFLU_RS02520 at 580.033 kb on - strand, within PFLU_RS02520 at 580.033 kb on - strand, within PFLU_RS02520 at 580.033 kb on - strand, within PFLU_RS02520 at 580.033 kb on - strand, within PFLU_RS02520 at 580.033 kb on - strand, within PFLU_RS02520 at 580.065 kb on + strand, within PFLU_RS02520 at 580.065 kb on + strand, within PFLU_RS02520 at 580.065 kb on + strand, within PFLU_RS02520 at 580.065 kb on + strand, within PFLU_RS02520 at 580.065 kb on + strand, within PFLU_RS02520 at 580.065 kb on + strand, within PFLU_RS02520 at 580.065 kb on + strand, within PFLU_RS02520 at 580.066 kb on - strand, within PFLU_RS02520 at 580.066 kb on - strand, within PFLU_RS02520 at 580.066 kb on - strand, within PFLU_RS02520 at 580.066 kb on - strand, within PFLU_RS02520 at 580.066 kb on - strand, within PFLU_RS02520 at 580.066 kb on - strand, within PFLU_RS02520 at 580.066 kb on - strand, within PFLU_RS02520 at 580.066 kb on - strand, within PFLU_RS02520 at 580.090 kb on + strand, within PFLU_RS02520 at 580.090 kb on + strand, within PFLU_RS02520 at 580.090 kb on + strand, within PFLU_RS02520 at 580.090 kb on + strand, within PFLU_RS02520 at 580.090 kb on + strand, within PFLU_RS02520 at 580.090 kb on + strand, within PFLU_RS02520 at 580.090 kb on + strand, within PFLU_RS02520 at 580.091 kb on - strand, within PFLU_RS02520 at 580.091 kb on - strand, within PFLU_RS02520 at 580.091 kb on - strand, within PFLU_RS02520 at 580.091 kb on - strand, within PFLU_RS02520 at 580.094 kb on + strand, within PFLU_RS02520 at 580.094 kb on + strand, within PFLU_RS02520 at 580.094 kb on + strand, within PFLU_RS02520 at 580.094 kb on + strand, within PFLU_RS02520 at 580.094 kb on + strand, within PFLU_RS02520 at 580.095 kb on - strand, within PFLU_RS02520 at 580.095 kb on - strand, within PFLU_RS02520 at 580.095 kb on - strand, within PFLU_RS02520 at 580.095 kb on - strand, within PFLU_RS02520 at 580.095 kb on - strand, within PFLU_RS02520 at 580.095 kb on - strand, within PFLU_RS02520 at 580.095 kb on - strand, within PFLU_RS02520 at 580.095 kb on - strand, within PFLU_RS02520 at 580.095 kb on - strand, within PFLU_RS02520 at 580.118 kb on + strand, within PFLU_RS02520 at 580.119 kb on - strand, within PFLU_RS02520 at 580.119 kb on - strand, within PFLU_RS02520 at 580.119 kb on - strand, within PFLU_RS02520 at 580.119 kb on - strand, within PFLU_RS02520 at 580.119 kb on - strand, within PFLU_RS02520 at 580.132 kb on + strand, within PFLU_RS02520 at 580.133 kb on - strand, within PFLU_RS02520 at 580.133 kb on - strand, within PFLU_RS02520 at 580.133 kb on - strand, within PFLU_RS02520 at 580.133 kb on - strand, within PFLU_RS02520 at 580.133 kb on - strand, within PFLU_RS02520 at 580.133 kb on - strand, within PFLU_RS02520 at 580.169 kb on - strand, within PFLU_RS02520 at 580.187 kb on + strand, within PFLU_RS02520 at 580.256 kb on + strand at 580.256 kb on + strand at 580.256 kb on + strand at 580.256 kb on + strand at 580.256 kb on + strand at 580.256 kb on + strand at 580.256 kb on + strand at 580.256 kb on + strand at 580.256 kb on + strand at 580.256 kb on + strand at 580.256 kb on + strand at 580.256 kb on + strand at 580.256 kb on + strand at 580.257 kb on - strand at 580.257 kb on - strand at 580.257 kb on - strand at 580.257 kb on - strand at 580.257 kb on - strand at 580.257 kb on - strand at 580.257 kb on - strand at 580.257 kb on - strand at 580.257 kb on - strand at 580.257 kb on - strand at 580.257 kb on - strand at 580.257 kb on - strand at 580.257 kb on - strand at 580.257 kb on - strand at 580.257 kb on - strand at 580.257 kb on - strand at 580.257 kb on - strand at 580.257 kb on - strand at 580.257 kb on - strand at 580.278 kb on + strand at 580.278 kb on + strand at 580.278 kb on + strand at 580.278 kb on + strand at 580.278 kb on + strand at 580.278 kb on + strand at 580.278 kb on + strand at 580.278 kb on + strand at 580.278 kb on + strand at 580.278 kb on + strand at 580.278 kb on + strand at 580.278 kb on + strand at 580.278 kb on + strand at 580.278 kb on + strand at 580.278 kb on + strand at 580.278 kb on + strand at 580.278 kb on + strand at 580.278 kb on + strand at 580.279 kb on - strand at 580.279 kb on - strand at 580.279 kb on - strand at 580.279 kb on - strand at 580.279 kb on - strand at 580.279 kb on - strand at 580.279 kb on - strand at 580.279 kb on - strand at 580.279 kb on - strand at 580.279 kb on - strand at 580.279 kb on - strand at 580.279 kb on - strand at 580.279 kb on - strand at 580.279 kb on - strand at 580.279 kb on - strand at 580.279 kb on - strand at 580.279 kb on - strand at 580.279 kb on - strand at 580.281 kb on + strand at 580.281 kb on + strand at 580.281 kb on + strand at 580.281 kb on + strand at 580.281 kb on + strand at 580.281 kb on + strand at 580.281 kb on + strand at 580.281 kb on + strand at 580.281 kb on + strand at 580.281 kb on + strand at 580.282 kb on - strand at 580.282 kb on - strand at 580.282 kb on - strand at 580.282 kb on - strand at 580.296 kb on + strand at 580.297 kb on - strand at 580.436 kb on + strand at 580.436 kb on + strand at 580.436 kb on + strand at 580.436 kb on + strand at 580.436 kb on + strand at 580.437 kb on - strand at 580.437 kb on - strand at 580.437 kb on - strand at 580.437 kb on - strand at 580.437 kb on - strand at 580.437 kb on - strand at 580.520 kb on + strand at 580.533 kb on + strand at 580.534 kb on - strand at 580.534 kb on - strand at 580.534 kb on - strand at 580.555 kb on + strand at 580.555 kb on + strand at 580.555 kb on + strand at 580.555 kb on + strand at 580.555 kb on + strand at 580.555 kb on + strand at 580.555 kb on + strand at 580.555 kb on + strand at 580.555 kb on + strand at 580.555 kb on + strand at 580.555 kb on + strand at 580.555 kb on + strand at 580.555 kb on + strand at 580.555 kb on + strand at 580.555 kb on + strand at 580.555 kb on + strand at 580.555 kb on + strand at 580.555 kb on + strand at 580.556 kb on - strand at 580.556 kb on - strand at 580.556 kb on - strand at 580.556 kb on - strand at 580.556 kb on - strand at 580.556 kb on - strand at 580.556 kb on - strand at 580.556 kb on - strand at 580.556 kb on - strand at 580.556 kb on - strand at 580.556 kb on - strand at 580.556 kb on - strand at 580.556 kb on - strand at 580.556 kb on - strand at 580.556 kb on - strand at 580.556 kb on - strand at 580.556 kb on - strand at 580.557 kb on + strand at 580.557 kb on + strand at 580.557 kb on + strand at 580.557 kb on + strand at 580.557 kb on + strand at 580.557 kb on + strand at 580.557 kb on + strand at 580.557 kb on + strand at 580.557 kb on + strand at 580.557 kb on + strand at 580.557 kb on + strand at 580.557 kb on + strand at 580.557 kb on + strand at 580.557 kb on + strand at 580.557 kb on + strand at 580.557 kb on + strand at 580.557 kb on + strand at 580.558 kb on - strand at 580.558 kb on - strand at 580.558 kb on - strand at 580.558 kb on - strand at 580.558 kb on - strand at 580.558 kb on - strand at 580.558 kb on - strand at 580.558 kb on - strand at 580.558 kb on - strand at 580.558 kb on - strand at 580.558 kb on - strand at 580.583 kb on - strand at 580.622 kb on + strand at 580.622 kb on + strand at 580.622 kb on + strand at 580.623 kb on - strand at 580.623 kb on - strand at 580.623 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Glycine betaine (C)(N); with MOPS remove 578,987 + PFLU_RS02515 0.17 +1.1 578,987 + PFLU_RS02515 0.17 -1.4 578,987 + PFLU_RS02515 0.17 +0.9 578,987 + PFLU_RS02515 0.17 +1.4 578,988 - PFLU_RS02515 0.17 -0.3 578,988 - PFLU_RS02515 0.17 +1.7 579,076 + PFLU_RS02515 0.26 -0.3 579,076 + PFLU_RS02515 0.26 -1.6 579,077 - PFLU_RS02515 0.26 -2.0 579,077 - PFLU_RS02515 0.26 -1.7 579,077 - PFLU_RS02515 0.26 +1.3 579,342 - PFLU_RS02515 0.52 -1.0 579,432 - PFLU_RS02515 0.61 +1.7 579,432 - PFLU_RS02515 0.61 -0.3 579,432 - PFLU_RS02515 0.61 -0.6 579,515 + PFLU_RS02515 0.69 +2.6 579,808 + +1.9 579,808 + +0.0 579,808 + -2.1 579,808 + +2.0 579,808 + -1.1 579,808 + -2.0 579,808 + -2.2 579,808 + -2.6 579,809 - -0.7 579,809 - +0.3 579,809 - +3.0 579,809 - +2.7 579,817 + -0.1 579,817 + -2.5 579,817 + +1.4 579,817 + +0.8 579,817 + +0.8 579,818 - -1.8 579,830 + -2.2 579,831 - -3.2 579,831 - +0.9 579,831 - +1.1 579,831 - +1.3 579,842 + +2.4 579,842 + -0.7 579,842 + +1.7 579,843 - -2.0 579,843 - +0.7 579,843 - +1.7 579,843 - -1.7 579,843 - +3.6 579,843 - -1.3 579,843 - -0.6 579,843 - -1.6 579,843 - +0.3 579,843 - +0.1 579,843 - -0.1 579,843 - +2.9 579,843 - +2.5 579,844 + -2.9 579,844 + +2.0 579,844 + +0.3 579,845 - +2.9 579,845 - +0.6 579,858 + -1.9 579,859 - -1.2 579,859 - -1.6 579,859 - -0.4 579,909 + +3.0 579,909 + -1.0 579,909 + +0.8 579,909 + -2.4 579,909 + -0.4 579,909 + -1.5 579,909 + -0.0 579,910 - -0.1 579,910 - -0.1 579,969 + PFLU_RS02520 0.18 +0.9 579,970 - PFLU_RS02520 0.19 -0.4 579,997 + PFLU_RS02520 0.26 -2.5 579,997 + PFLU_RS02520 0.26 -0.4 579,997 + PFLU_RS02520 0.26 -1.1 579,998 - PFLU_RS02520 0.26 -0.7 580,030 + PFLU_RS02520 0.34 +2.4 580,030 + PFLU_RS02520 0.34 +1.5 580,030 + PFLU_RS02520 0.34 -1.1 580,030 + PFLU_RS02520 0.34 +1.1 580,031 - PFLU_RS02520 0.34 +1.2 580,031 - PFLU_RS02520 0.34 -2.1 580,032 + PFLU_RS02520 0.34 +1.0 580,032 + PFLU_RS02520 0.34 -1.5 580,032 + PFLU_RS02520 0.34 -2.9 580,032 + PFLU_RS02520 0.34 -1.8 580,032 + PFLU_RS02520 0.34 +2.5 580,032 + PFLU_RS02520 0.34 -2.0 580,032 + PFLU_RS02520 0.34 +0.2 580,032 + PFLU_RS02520 0.34 +2.4 580,032 + PFLU_RS02520 0.34 +2.1 580,033 - PFLU_RS02520 0.35 +1.4 580,033 - PFLU_RS02520 0.35 -0.7 580,033 - PFLU_RS02520 0.35 +1.0 580,033 - PFLU_RS02520 0.35 -1.7 580,033 - PFLU_RS02520 0.35 +1.9 580,065 + PFLU_RS02520 0.43 -3.1 580,065 + PFLU_RS02520 0.43 -0.3 580,065 + PFLU_RS02520 0.43 +2.2 580,065 + PFLU_RS02520 0.43 +2.4 580,065 + PFLU_RS02520 0.43 -0.8 580,065 + PFLU_RS02520 0.43 -3.2 580,065 + PFLU_RS02520 0.43 +0.5 580,066 - PFLU_RS02520 0.43 -2.5 580,066 - PFLU_RS02520 0.43 +1.8 580,066 - PFLU_RS02520 0.43 -1.4 580,066 - PFLU_RS02520 0.43 +1.6 580,066 - PFLU_RS02520 0.43 -1.3 580,066 - PFLU_RS02520 0.43 -1.4 580,066 - PFLU_RS02520 0.43 +1.0 580,066 - PFLU_RS02520 0.43 +0.9 580,090 + PFLU_RS02520 0.49 +1.0 580,090 + PFLU_RS02520 0.49 +1.4 580,090 + PFLU_RS02520 0.49 +1.5 580,090 + PFLU_RS02520 0.49 +2.1 580,090 + PFLU_RS02520 0.49 -1.6 580,090 + PFLU_RS02520 0.49 +1.2 580,090 + PFLU_RS02520 0.49 -0.1 580,091 - PFLU_RS02520 0.49 +1.2 580,091 - PFLU_RS02520 0.49 +2.5 580,091 - PFLU_RS02520 0.49 +0.6 580,091 - PFLU_RS02520 0.49 +0.9 580,094 + PFLU_RS02520 0.50 -1.4 580,094 + PFLU_RS02520 0.50 +2.2 580,094 + PFLU_RS02520 0.50 -0.4 580,094 + PFLU_RS02520 0.50 +0.9 580,094 + PFLU_RS02520 0.50 -0.1 580,095 - PFLU_RS02520 0.50 +0.5 580,095 - PFLU_RS02520 0.50 -1.5 580,095 - PFLU_RS02520 0.50 +0.3 580,095 - PFLU_RS02520 0.50 +0.9 580,095 - PFLU_RS02520 0.50 +3.1 580,095 - PFLU_RS02520 0.50 -1.8 580,095 - PFLU_RS02520 0.50 -1.0 580,095 - PFLU_RS02520 0.50 +1.3 580,095 - PFLU_RS02520 0.50 -1.0 580,118 + PFLU_RS02520 0.56 +2.1 580,119 - PFLU_RS02520 0.56 -2.0 580,119 - PFLU_RS02520 0.56 +0.6 580,119 - PFLU_RS02520 0.56 -2.0 580,119 - PFLU_RS02520 0.56 +0.4 580,119 - PFLU_RS02520 0.56 +0.5 580,132 + PFLU_RS02520 0.60 +0.6 580,133 - PFLU_RS02520 0.60 -0.8 580,133 - PFLU_RS02520 0.60 -1.4 580,133 - PFLU_RS02520 0.60 +0.2 580,133 - PFLU_RS02520 0.60 -1.0 580,133 - PFLU_RS02520 0.60 +1.3 580,133 - PFLU_RS02520 0.60 +0.3 580,169 - PFLU_RS02520 0.69 +1.2 580,187 + PFLU_RS02520 0.73 -0.9 580,256 + +0.6 580,256 + +3.9 580,256 + -0.6 580,256 + +0.9 580,256 + -0.7 580,256 + +0.6 580,256 + +0.3 580,256 + +1.5 580,256 + +1.2 580,256 + +2.4 580,256 + -0.2 580,256 + -1.5 580,256 + -1.1 580,257 - -1.5 580,257 - -1.7 580,257 - -1.3 580,257 - -0.6 580,257 - +2.1 580,257 - -2.2 580,257 - -1.8 580,257 - +1.5 580,257 - +0.4 580,257 - -2.9 580,257 - +0.6 580,257 - +0.2 580,257 - -0.6 580,257 - +1.2 580,257 - +0.5 580,257 - -0.2 580,257 - -0.1 580,257 - +0.7 580,257 - -0.4 580,278 + +0.9 580,278 + +0.2 580,278 + +0.1 580,278 + -0.3 580,278 + +1.2 580,278 + -0.4 580,278 + -0.1 580,278 + -2.5 580,278 + -1.1 580,278 + -1.6 580,278 + -2.3 580,278 + +0.0 580,278 + -2.6 580,278 + -2.4 580,278 + -0.1 580,278 + +0.7 580,278 + -1.7 580,278 + +0.1 580,279 - +1.4 580,279 - +0.7 580,279 - +0.7 580,279 - -2.4 580,279 - -1.8 580,279 - +2.3 580,279 - -1.3 580,279 - -0.6 580,279 - +1.6 580,279 - +1.5 580,279 - -1.3 580,279 - +1.6 580,279 - -1.0 580,279 - +1.0 580,279 - +2.3 580,279 - -2.8 580,279 - +1.0 580,279 - -2.2 580,281 + -0.1 580,281 + +1.8 580,281 + +0.1 580,281 + -1.0 580,281 + +1.4 580,281 + +0.2 580,281 + +2.3 580,281 + +0.4 580,281 + -0.3 580,281 + +0.3 580,282 - -0.3 580,282 - +1.2 580,282 - +1.2 580,282 - +0.3 580,296 + +2.4 580,297 - +0.4 580,436 + -0.3 580,436 + +1.4 580,436 + +0.7 580,436 + -0.3 580,436 + -0.2 580,437 - +0.4 580,437 - +0.6 580,437 - -2.0 580,437 - -1.2 580,437 - -1.4 580,437 - +1.6 580,520 + -0.9 580,533 + +0.6 580,534 - +1.4 580,534 - -0.7 580,534 - +1.3 580,555 + -2.7 580,555 + +2.6 580,555 + -1.1 580,555 + -2.4 580,555 + -1.1 580,555 + +1.6 580,555 + -1.5 580,555 + +1.0 580,555 + -0.3 580,555 + +1.1 580,555 + -0.7 580,555 + -2.6 580,555 + -1.9 580,555 + +0.9 580,555 + -1.5 580,555 + -1.6 580,555 + +1.5 580,555 + -1.3 580,556 - +1.3 580,556 - +0.3 580,556 - -1.4 580,556 - -0.9 580,556 - -0.9 580,556 - -3.0 580,556 - -2.6 580,556 - +0.9 580,556 - -0.4 580,556 - +2.1 580,556 - +0.6 580,556 - +0.9 580,556 - +2.1 580,556 - -1.6 580,556 - -0.7 580,556 - -1.4 580,556 - -1.9 580,557 + -1.6 580,557 + -2.3 580,557 + +0.7 580,557 + -0.1 580,557 + -1.3 580,557 + -0.8 580,557 + -0.5 580,557 + -0.4 580,557 + -2.3 580,557 + -0.8 580,557 + +2.0 580,557 + -2.2 580,557 + -2.6 580,557 + -2.4 580,557 + +1.2 580,557 + +0.1 580,557 + +2.0 580,558 - +0.7 580,558 - -1.6 580,558 - -1.5 580,558 - +1.6 580,558 - -0.8 580,558 - +0.6 580,558 - +2.6 580,558 - -1.5 580,558 - +0.2 580,558 - -2.1 580,558 - -1.9 580,583 - -2.9 580,622 + +1.9 580,622 + +2.9 580,622 + +0.3 580,623 - +0.6 580,623 - +1.9 580,623 - +1.9
Or see this region's nucleotide sequence