Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3915

Experiment: Min media with glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Min media with glucose
4,083,688	+		Psest_3914	0.29	+0.3
4,083,688	+		Psest_3914	0.29	-1.6
4,083,745	+		Psest_3914	0.36	-0.3
4,083,746	-		Psest_3914	0.36	-0.5
4,083,991	+		Psest_3914	0.63	-1.8
4,083,992	-		Psest_3914	0.63	+1.3
4,084,029	+		Psest_3914	0.67	-2.2
4,084,029	+		Psest_3914	0.67	+1.1
4,084,029	+		Psest_3914	0.67	+0.5
4,084,030	-		Psest_3914	0.68	+0.2
4,084,030	-		Psest_3914	0.68	+0.9
4,084,030	-		Psest_3914	0.68	+1.1
4,084,030	-		Psest_3914	0.68	-0.4
4,084,030	-		Psest_3914	0.68	+2.2
4,084,030	-		Psest_3914	0.68	-0.3
4,084,030	-		Psest_3914	0.68	-1.6
4,084,078	+		Psest_3914	0.73	+1.9
4,084,079	-		Psest_3914	0.73	+1.4
4,084,240	+				-0.2
4,084,302	+				+0.4
4,084,302	+				-2.1
4,084,313	+				-0.5
4,084,313	+				+0.1
4,084,313	+				+0.8
4,084,314	-				+1.1
4,084,398	+				+0.3
4,084,446	+				-1.1
4,084,447	-				+1.3
4,084,588	+		Psest_3915	0.13	-2.3
4,084,589	-		Psest_3915	0.13	-1.3
4,084,589	-		Psest_3915	0.13	-0.7
4,084,589	-		Psest_3915	0.13	-0.4
4,084,589	-		Psest_3915	0.13	+0.2
4,084,594	+		Psest_3915	0.14	+0.4
4,084,594	+		Psest_3915	0.14	-0.8
4,084,595	-		Psest_3915	0.15	+0.9
4,084,595	-		Psest_3915	0.15	-0.4
4,084,620	+		Psest_3915	0.21	-2.5
4,084,620	+		Psest_3915	0.21	+1.0
4,084,621	-		Psest_3915	0.21	-0.3
4,084,621	-		Psest_3915	0.21	+1.3
4,084,621	-		Psest_3915	0.21	+0.3
4,084,690	+		Psest_3915	0.39	-0.7
4,084,690	+		Psest_3915	0.39	-0.7
4,084,739	+		Psest_3915	0.52	-2.0
4,084,740	-		Psest_3915	0.52	-0.3
4,084,740	-		Psest_3915	0.52	+1.3
4,084,740	-		Psest_3915	0.52	-2.0
4,084,740	-		Psest_3915	0.52	-2.0
4,084,740	-		Psest_3915	0.52	-0.6
4,084,757	-		Psest_3915	0.56	+1.1
4,084,927	+				+1.4
4,084,927	+				+0.3
4,084,927	+				+2.0
4,084,928	-				-0.5
4,084,928	-				-0.7
4,084,928	-				-0.3
4,085,024	+				-0.8
4,085,089	+				-0.6
4,085,089	+				-0.4
4,085,090	-				-0.8
4,085,090	-				+1.7
4,085,090	-				+1.0
4,085,090	-				-0.3
4,085,090	-				+1.9
4,085,129	-		Psest_3916	0.14	-2.1
4,085,214	+		Psest_3916	0.26	+1.1
4,085,214	+		Psest_3916	0.26	+0.3
4,085,215	-		Psest_3916	0.27	+1.2
4,085,215	-		Psest_3916	0.27	+1.5
4,085,215	-		Psest_3916	0.27	-0.2
4,085,215	-		Psest_3916	0.27	-2.9
4,085,220	+		Psest_3916	0.27	+1.0
4,085,220	+		Psest_3916	0.27	-0.7
4,085,220	+		Psest_3916	0.27	-1.0
4,085,220	+		Psest_3916	0.27	+0.2
4,085,220	+		Psest_3916	0.27	+0.9
4,085,220	+		Psest_3916	0.27	+1.0
4,085,220	+		Psest_3916	0.27	-2.3
4,085,220	+		Psest_3916	0.27	+1.9
4,085,220	+		Psest_3916	0.27	-1.4
4,085,220	+		Psest_3916	0.27	+0.7
4,085,220	+		Psest_3916	0.27	+0.8
4,085,220	+		Psest_3916	0.27	+1.5
4,085,220	+		Psest_3916	0.27	-1.8
4,085,220	+		Psest_3916	0.27	+0.9
4,085,220	+		Psest_3916	0.27	-1.7
4,085,220	+		Psest_3916	0.27	-0.3
4,085,220	+		Psest_3916	0.27	-1.6
4,085,220	+		Psest_3916	0.27	-0.5
4,085,221	-		Psest_3916	0.27	-2.1
4,085,221	-		Psest_3916	0.27	+1.0
4,085,221	-		Psest_3916	0.27	+0.4
4,085,221	-		Psest_3916	0.27	-0.0
4,085,221	-		Psest_3916	0.27	-3.3
4,085,221	-		Psest_3916	0.27	+0.5
4,085,221	-		Psest_3916	0.27	+1.7
4,085,221	-		Psest_3916	0.27	+0.7
4,085,221	-		Psest_3916	0.27	+0.2
4,085,221	-		Psest_3916	0.27	-0.7
4,085,221	-		Psest_3916	0.27	-1.1
4,085,221	-		Psest_3916	0.27	+0.3
4,085,221	-		Psest_3916	0.27	-2.0
4,085,221	-		Psest_3916	0.27	-1.7
4,085,221	-		Psest_3916	0.27	+0.9
4,085,298	+		Psest_3916	0.39	-0.3
4,085,298	+		Psest_3916	0.39	+0.2
4,085,298	+		Psest_3916	0.39	-0.0
4,085,298	+		Psest_3916	0.39	-2.0
4,085,299	-		Psest_3916	0.39	-1.8
4,085,299	-		Psest_3916	0.39	-0.2
4,085,302	+		Psest_3916	0.39	-1.0
4,085,302	+		Psest_3916	0.39	-2.8
4,085,302	+		Psest_3916	0.39	+1.7
4,085,302	+		Psest_3916	0.39	+0.6
4,085,302	+		Psest_3916	0.39	+0.7
4,085,303	-		Psest_3916	0.40	-1.3
4,085,303	-		Psest_3916	0.40	+0.9
4,085,303	-		Psest_3916	0.40	+0.3
4,085,303	-		Psest_3916	0.40	-0.3
4,085,303	-		Psest_3916	0.40	+0.6
4,085,303	-		Psest_3916	0.40	-1.9
4,085,303	-		Psest_3916	0.40	-2.5
4,085,489	+		Psest_3916	0.67	-0.3
4,085,489	+		Psest_3916	0.67	-0.3
4,085,489	+		Psest_3916	0.67	+0.3
4,085,489	+		Psest_3916	0.67	+0.0
4,085,489	+		Psest_3916	0.67	-1.5
4,085,489	+		Psest_3916	0.67	-0.7
4,085,489	+		Psest_3916	0.67	+0.9
4,085,489	+		Psest_3916	0.67	+0.6
4,085,489	+		Psest_3916	0.67	-0.2
4,085,489	+		Psest_3916	0.67	+2.0
4,085,489	+		Psest_3916	0.67	+0.4
4,085,489	+		Psest_3916	0.67	-1.0
4,085,490	-		Psest_3916	0.67	-0.6
4,085,490	-		Psest_3916	0.67	+0.2
4,085,490	-		Psest_3916	0.67	+0.7
4,085,490	-		Psest_3916	0.67	+1.5
4,085,505	+		Psest_3916	0.69	+0.8
4,085,505	+		Psest_3916	0.69	+0.2
4,085,505	+		Psest_3916	0.69	+0.3
4,085,505	+		Psest_3916	0.69	-1.6
4,085,505	+		Psest_3916	0.69	+0.5
4,085,505	+		Psest_3916	0.69	-0.1
4,085,505	+		Psest_3916	0.69	-0.6
4,085,505	+		Psest_3916	0.69	+1.5
4,085,505	+		Psest_3916	0.69	-1.0
4,085,505	+		Psest_3916	0.69	-0.8
4,085,505	+		Psest_3916	0.69	+1.3
4,085,506	-		Psest_3916	0.70	-0.3
4,085,506	-		Psest_3916	0.70	-1.0
4,085,506	-		Psest_3916	0.70	-0.8
4,085,506	-		Psest_3916	0.70	-0.3
4,085,506	-		Psest_3916	0.70	-2.7
4,085,508	+		Psest_3916	0.70	-2.7
4,085,508	+		Psest_3916	0.70	+1.3
4,085,508	+		Psest_3916	0.70	-0.7
4,085,508	+		Psest_3916	0.70	-0.4
4,085,508	+		Psest_3916	0.70	-0.3
4,085,509	-		Psest_3916	0.70	+1.1
4,085,509	-		Psest_3916	0.70	+0.3
4,085,509	-		Psest_3916	0.70	+0.2
4,085,509	-		Psest_3916	0.70	+0.9
4,085,509	-		Psest_3916	0.70	+0.5
4,085,509	-		Psest_3916	0.70	-1.1
4,085,509	-		Psest_3916	0.70	-1.3
4,085,536	+		Psest_3916	0.74	+0.9
4,085,537	-		Psest_3916	0.74	-0.8
4,085,537	-		Psest_3916	0.74	+1.2
4,085,555	+		Psest_3916	0.77	+1.2
4,085,556	-		Psest_3916	0.77	+0.6
4,085,562	+		Psest_3916	0.78	+0.1
4,085,562	+		Psest_3916	0.78	-1.0
4,085,562	+		Psest_3916	0.78	+0.0
4,085,563	-		Psest_3916	0.78	+1.3
4,085,563	-		Psest_3916	0.78	-3.7
4,085,656	-				-2.2
4,085,746	+				+0.8
4,085,746	+				+0.0
4,085,746	+				+2.0
4,085,746	+				+0.5
4,085,747	-				-0.7
4,085,747	-				-0.4
4,085,747	-				+1.0
4,085,747	-				-0.8
4,085,747	-				+1.8
4,085,747	-				+1.7
4,085,747	-				-0.6
4,085,747	-				-1.0
4,085,747	-				-1.7
4,085,747	-				-1.0
4,085,747	-				+0.6
4,085,747	-				-0.3
4,085,752	+				+3.6
4,085,752	+				-2.0
4,085,752	+				+0.1
4,085,752	+				-1.6
4,085,752	+				+0.3
4,085,752	+				-0.7
4,085,752	+				-1.5
4,085,752	+				-1.7
4,085,752	+				+3.3
4,085,752	+				-0.3
4,085,752	+				-1.2
4,085,752	+				-0.2
4,085,752	+				-1.4
4,085,752	+				+0.3
4,085,752	+				+0.2
4,085,753	-				-1.0
4,085,753	-				+0.3
4,085,753	-				-1.0
4,085,753	-				-1.7
4,085,753	-				-1.6
4,085,753	-				-0.3
4,085,753	-				+0.0
4,085,753	-				+1.9
4,085,753	-				-0.8
4,085,753	-				-1.8
4,085,753	-				-1.2
4,085,753	-				-0.0
4,085,753	-				+2.3
4,085,753	-				+0.7
4,085,753	-				-0.3
4,085,753	-				+2.2
4,085,753	-				+0.8
4,085,753	-				+0.7
4,085,753	-				+0.4
4,085,753	-				+1.0
4,085,753	-				-0.2
4,085,753	-				+2.5
4,085,753	-				-0.1
4,085,753	-				-0.7
4,085,753	-				+1.4
4,085,753	-				+4.6
4,085,753	-				-0.1
4,085,753	-				-0.4
4,085,753	-				+0.4
4,085,753	-				-1.9
4,085,757	-				+1.1
4,085,757	-				+0.9
4,085,757	-				-0.7