Experiment: Min media with glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2471 and Psest_2472 are separated by 430 nucleotides Psest_2472 and Psest_2473 are separated by 11 nucleotides
Psest_2471: Psest_2471 - Glycerol-3-phosphate dehydrogenase, at 2,640,446 to 2,641,468
_2471
Psest_2472: Psest_2472 - beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA, at 2,641,899 to 2,642,414
_2472
Psest_2473: Psest_2473 - 3-oxoacyl-(acyl-carrier-protein) synthase, at 2,642,426 to 2,643,643
_2473
Position (kb)
2641
2642
2643 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2641.514 kb on + strand at 2641.514 kb on + strand at 2641.514 kb on + strand at 2641.514 kb on + strand at 2641.514 kb on + strand at 2641.514 kb on + strand at 2641.515 kb on - strand at 2641.515 kb on - strand at 2641.515 kb on - strand at 2641.515 kb on - strand at 2641.515 kb on - strand at 2641.661 kb on + strand at 2641.662 kb on - strand at 2641.663 kb on + strand at 2641.709 kb on + strand at 2641.811 kb on + strand at 2641.811 kb on + strand at 2641.811 kb on + strand at 2641.811 kb on + strand at 2641.817 kb on + strand at 2641.817 kb on + strand at 2641.856 kb on + strand at 2641.856 kb on + strand at 2641.856 kb on + strand at 2641.856 kb on + strand at 2641.856 kb on + strand at 2641.856 kb on + strand at 2641.856 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Min media with glucose remove 2,641,514 + +0.9 2,641,514 + +0.3 2,641,514 + +0.7 2,641,514 + -1.0 2,641,514 + -0.7 2,641,514 + -1.6 2,641,515 - -0.2 2,641,515 - -0.6 2,641,515 - +0.1 2,641,515 - -0.6 2,641,515 - +0.4 2,641,661 + -1.6 2,641,662 - -2.0 2,641,663 + -1.6 2,641,709 + +1.7 2,641,811 + -0.8 2,641,811 + +1.1 2,641,811 + +0.0 2,641,811 + -0.6 2,641,817 + +0.9 2,641,817 + -1.2 2,641,856 + +0.9 2,641,856 + +0.5 2,641,856 + +0.8 2,641,856 + +1.8 2,641,856 + +1.9 2,641,856 + -0.1 2,641,856 + +0.3
Or see this region's nucleotide sequence