Experiment: L-tyrosine
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0781 and Psest_0782 are separated by 250 nucleotides Psest_0782 and Psest_0783 are separated by 107 nucleotides
Psest_0781: Psest_0781 - phenylalanine-4-hydroxylase, monomeric form, at 849,615 to 850,400
_0781
Psest_0782: Psest_0782 - Transcriptional regulator of aromatic amino acids metabolism, at 850,651 to 852,210
_0782
Psest_0783: Psest_0783 - PAS domain S-box, at 852,318 to 856,490
_0783
Position (kb) 850
851
852
853 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 849.736 kb on + strand, within Psest_0781 at 849.736 kb on + strand, within Psest_0781 at 849.736 kb on + strand, within Psest_0781 at 849.736 kb on + strand, within Psest_0781 at 849.736 kb on + strand, within Psest_0781 at 849.737 kb on - strand, within Psest_0781 at 849.737 kb on - strand, within Psest_0781 at 849.737 kb on - strand, within Psest_0781 at 849.737 kb on - strand, within Psest_0781 at 849.764 kb on - strand, within Psest_0781 at 849.826 kb on + strand, within Psest_0781 at 849.826 kb on + strand, within Psest_0781 at 849.826 kb on + strand, within Psest_0781 at 849.826 kb on + strand, within Psest_0781 at 849.827 kb on - strand, within Psest_0781 at 849.827 kb on - strand, within Psest_0781 at 849.865 kb on + strand, within Psest_0781 at 849.865 kb on + strand, within Psest_0781 at 849.934 kb on + strand, within Psest_0781 at 849.934 kb on + strand, within Psest_0781 at 849.935 kb on - strand, within Psest_0781 at 849.935 kb on - strand, within Psest_0781 at 849.935 kb on - strand, within Psest_0781 at 849.977 kb on - strand, within Psest_0781 at 850.063 kb on + strand, within Psest_0781 at 850.063 kb on + strand, within Psest_0781 at 850.063 kb on + strand, within Psest_0781 at 850.089 kb on - strand, within Psest_0781 at 850.264 kb on + strand, within Psest_0781 at 850.264 kb on + strand, within Psest_0781 at 850.265 kb on - strand, within Psest_0781 at 850.380 kb on + strand at 850.380 kb on + strand at 850.404 kb on + strand at 850.457 kb on + strand at 850.457 kb on + strand at 850.458 kb on - strand at 850.458 kb on - strand at 850.458 kb on - strand at 850.568 kb on + strand at 850.580 kb on - strand at 850.656 kb on + strand at 850.656 kb on + strand at 850.720 kb on + strand at 850.774 kb on + strand at 850.774 kb on + strand at 850.774 kb on + strand at 850.774 kb on + strand at 850.775 kb on - strand at 850.775 kb on - strand at 850.775 kb on - strand at 850.947 kb on + strand, within Psest_0782 at 851.190 kb on - strand, within Psest_0782 at 851.231 kb on - strand, within Psest_0782 at 851.231 kb on - strand, within Psest_0782 at 851.665 kb on + strand, within Psest_0782 at 851.665 kb on + strand, within Psest_0782 at 851.665 kb on + strand, within Psest_0782 at 851.666 kb on - strand, within Psest_0782 at 851.666 kb on - strand, within Psest_0782 at 851.666 kb on - strand, within Psest_0782 at 851.746 kb on + strand, within Psest_0782 at 851.776 kb on - strand, within Psest_0782 at 852.793 kb on + strand, within Psest_0783 at 852.793 kb on + strand, within Psest_0783 at 853.091 kb on - strand, within Psest_0783 at 853.091 kb on - strand, within Psest_0783 at 853.091 kb on - strand, within Psest_0783
Per-strain Table
Position Strand Gene LocusTag Fraction L-tyrosine remove 849,736 + Psest_0781 0.15 -2.2 849,736 + Psest_0781 0.15 -0.6 849,736 + Psest_0781 0.15 +0.9 849,736 + Psest_0781 0.15 -1.5 849,736 + Psest_0781 0.15 +1.9 849,737 - Psest_0781 0.16 +0.2 849,737 - Psest_0781 0.16 -0.5 849,737 - Psest_0781 0.16 -1.6 849,737 - Psest_0781 0.16 +0.8 849,764 - Psest_0781 0.19 +2.3 849,826 + Psest_0781 0.27 +0.3 849,826 + Psest_0781 0.27 -0.2 849,826 + Psest_0781 0.27 -0.4 849,826 + Psest_0781 0.27 -0.2 849,827 - Psest_0781 0.27 -1.1 849,827 - Psest_0781 0.27 -0.8 849,865 + Psest_0781 0.32 +1.6 849,865 + Psest_0781 0.32 -1.6 849,934 + Psest_0781 0.41 -0.9 849,934 + Psest_0781 0.41 -0.7 849,935 - Psest_0781 0.41 +0.9 849,935 - Psest_0781 0.41 -1.7 849,935 - Psest_0781 0.41 +0.1 849,977 - Psest_0781 0.46 -2.0 850,063 + Psest_0781 0.57 -2.4 850,063 + Psest_0781 0.57 -2.8 850,063 + Psest_0781 0.57 -0.8 850,089 - Psest_0781 0.60 -0.5 850,264 + Psest_0781 0.83 +1.5 850,264 + Psest_0781 0.83 -2.0 850,265 - Psest_0781 0.83 -1.0 850,380 + -0.0 850,380 + -0.1 850,404 + -1.8 850,457 + +0.2 850,457 + +0.1 850,458 - -1.7 850,458 - -2.1 850,458 - +1.3 850,568 + -0.7 850,580 - +1.2 850,656 + -0.1 850,656 + +0.1 850,720 + -1.5 850,774 + +0.2 850,774 + -0.2 850,774 + +0.6 850,774 + -0.2 850,775 - -0.0 850,775 - -2.7 850,775 - -1.0 850,947 + Psest_0782 0.19 +1.3 851,190 - Psest_0782 0.35 -2.2 851,231 - Psest_0782 0.37 -2.5 851,231 - Psest_0782 0.37 -0.9 851,665 + Psest_0782 0.65 -0.2 851,665 + Psest_0782 0.65 +2.1 851,665 + Psest_0782 0.65 -0.7 851,666 - Psest_0782 0.65 -3.2 851,666 - Psest_0782 0.65 -2.1 851,666 - Psest_0782 0.65 -3.5 851,746 + Psest_0782 0.70 -1.6 851,776 - Psest_0782 0.72 -1.5 852,793 + Psest_0783 0.11 +0.1 852,793 + Psest_0783 0.11 +0.5 853,091 - Psest_0783 0.19 +0.5 853,091 - Psest_0783 0.19 +0.1 853,091 - Psest_0783 0.19 -0.1
Or see this region's nucleotide sequence