Experiment: L-Histidine
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2507 and Psest_2508 are separated by 401 nucleotides Psest_2508 and Psest_2509 are separated by 313 nucleotides
Psest_2507: Psest_2507 - Flagellin and related hook-associated proteins, at 2,680,494 to 2,681,678
_2507
Psest_2508: Psest_2508 - DNA ligase, NAD-dependent, at 2,682,080 to 2,684,455
_2508
Psest_2509: Psest_2509 - cell division protein ZipA, at 2,684,769 to 2,685,590
_2509
Position (kb)
2682
2683
2684
2685 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 2681.114 kb on + strand, within Psest_2507 at 2681.150 kb on + strand, within Psest_2507 at 2681.150 kb on + strand, within Psest_2507 at 2681.150 kb on + strand, within Psest_2507 at 2681.150 kb on + strand, within Psest_2507 at 2681.151 kb on - strand, within Psest_2507 at 2681.151 kb on - strand, within Psest_2507 at 2681.151 kb on - strand, within Psest_2507 at 2681.151 kb on - strand, within Psest_2507 at 2681.151 kb on - strand, within Psest_2507 at 2681.151 kb on - strand, within Psest_2507 at 2681.151 kb on - strand, within Psest_2507 at 2681.151 kb on - strand, within Psest_2507 at 2681.151 kb on - strand, within Psest_2507 at 2681.151 kb on - strand, within Psest_2507 at 2681.151 kb on - strand, within Psest_2507 at 2681.151 kb on - strand, within Psest_2507 at 2681.151 kb on - strand, within Psest_2507 at 2681.151 kb on - strand, within Psest_2507 at 2681.151 kb on - strand, within Psest_2507 at 2681.151 kb on - strand, within Psest_2507 at 2681.233 kb on - strand, within Psest_2507 at 2681.233 kb on - strand, within Psest_2507 at 2681.233 kb on - strand, within Psest_2507 at 2681.388 kb on + strand, within Psest_2507 at 2681.388 kb on + strand, within Psest_2507 at 2681.405 kb on + strand, within Psest_2507 at 2681.405 kb on + strand, within Psest_2507 at 2681.406 kb on - strand, within Psest_2507 at 2681.465 kb on + strand, within Psest_2507 at 2681.669 kb on + strand at 2681.669 kb on + strand at 2681.701 kb on - strand at 2681.705 kb on - strand at 2681.705 kb on - strand at 2681.742 kb on - strand at 2681.848 kb on + strand at 2681.864 kb on + strand at 2681.864 kb on + strand at 2681.913 kb on - strand at 2682.081 kb on + strand at 2682.081 kb on + strand at 2682.081 kb on + strand at 2682.082 kb on - strand at 2684.649 kb on + strand at 2684.672 kb on - strand at 2684.768 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine remove 2,681,114 + Psest_2507 0.52 +2.6 2,681,150 + Psest_2507 0.55 +3.5 2,681,150 + Psest_2507 0.55 +2.9 2,681,150 + Psest_2507 0.55 +1.8 2,681,150 + Psest_2507 0.55 +3.5 2,681,151 - Psest_2507 0.55 +3.7 2,681,151 - Psest_2507 0.55 +3.3 2,681,151 - Psest_2507 0.55 +3.5 2,681,151 - Psest_2507 0.55 +2.1 2,681,151 - Psest_2507 0.55 +2.2 2,681,151 - Psest_2507 0.55 +2.8 2,681,151 - Psest_2507 0.55 +3.0 2,681,151 - Psest_2507 0.55 +2.1 2,681,151 - Psest_2507 0.55 +2.8 2,681,151 - Psest_2507 0.55 +2.9 2,681,151 - Psest_2507 0.55 +2.3 2,681,151 - Psest_2507 0.55 +3.3 2,681,151 - Psest_2507 0.55 +2.7 2,681,151 - Psest_2507 0.55 +2.5 2,681,151 - Psest_2507 0.55 +2.3 2,681,151 - Psest_2507 0.55 +3.8 2,681,233 - Psest_2507 0.62 +2.9 2,681,233 - Psest_2507 0.62 +2.3 2,681,233 - Psest_2507 0.62 +2.2 2,681,388 + Psest_2507 0.75 +4.2 2,681,388 + Psest_2507 0.75 +2.5 2,681,405 + Psest_2507 0.77 +2.9 2,681,405 + Psest_2507 0.77 +3.4 2,681,406 - Psest_2507 0.77 +2.5 2,681,465 + Psest_2507 0.82 +3.1 2,681,669 + +4.7 2,681,669 + +3.0 2,681,701 - +2.8 2,681,705 - +1.3 2,681,705 - -0.9 2,681,742 - +0.2 2,681,848 + -0.3 2,681,864 + +0.0 2,681,864 + +0.2 2,681,913 - -2.2 2,682,081 + -2.1 2,682,081 + +1.1 2,682,081 + +0.3 2,682,082 - +1.3 2,684,649 + -1.2 2,684,672 - -0.5 2,684,768 - +2.1
Or see this region's nucleotide sequence