Experiment: R2A control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS20910 and BPHYT_RS20915 are separated by 24 nucleotides BPHYT_RS20915 and BPHYT_RS20920 are separated by 11 nucleotides BPHYT_RS20920 and BPHYT_RS20925 are separated by 400 nucleotides
BPHYT_RS20910: BPHYT_RS20910 - oxidoreductase, at 252,165 to 254,402
_RS20910
BPHYT_RS20915: BPHYT_RS20915 - hypothetical protein, at 254,427 to 255,434
_RS20915
BPHYT_RS20920: BPHYT_RS20920 - oxidoreductase, at 255,446 to 255,991
_RS20920
BPHYT_RS20925: BPHYT_RS20925 - dimethylallyltransferase, at 256,392 to 257,069
_RS20925
Position (kb) 254
255
256 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 253.498 kb on + strand, within BPHYT_RS20910 at 253.872 kb on + strand, within BPHYT_RS20910 at 253.873 kb on - strand, within BPHYT_RS20910 at 253.876 kb on + strand, within BPHYT_RS20910 at 253.877 kb on - strand, within BPHYT_RS20910 at 253.977 kb on + strand, within BPHYT_RS20910 at 254.045 kb on + strand, within BPHYT_RS20910 at 254.077 kb on + strand, within BPHYT_RS20910 at 254.078 kb on - strand, within BPHYT_RS20910 at 254.309 kb on + strand at 254.397 kb on - strand at 254.707 kb on + strand, within BPHYT_RS20915 at 255.056 kb on - strand, within BPHYT_RS20915 at 255.607 kb on - strand, within BPHYT_RS20920 at 255.607 kb on - strand, within BPHYT_RS20920 at 255.618 kb on + strand, within BPHYT_RS20920 at 255.836 kb on + strand, within BPHYT_RS20920 at 255.837 kb on - strand, within BPHYT_RS20920 at 255.837 kb on - strand, within BPHYT_RS20920 at 256.216 kb on + strand at 256.304 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A control remove 253,498 + BPHYT_RS20910 0.60 -0.3 253,872 + BPHYT_RS20910 0.76 -0.1 253,873 - BPHYT_RS20910 0.76 +0.6 253,876 + BPHYT_RS20910 0.76 +0.8 253,877 - BPHYT_RS20910 0.76 -0.5 253,977 + BPHYT_RS20910 0.81 +0.3 254,045 + BPHYT_RS20910 0.84 -0.1 254,077 + BPHYT_RS20910 0.85 -0.2 254,078 - BPHYT_RS20910 0.85 +0.4 254,309 + +0.8 254,397 - +0.9 254,707 + BPHYT_RS20915 0.28 +0.0 255,056 - BPHYT_RS20915 0.62 -0.1 255,607 - BPHYT_RS20920 0.29 -0.2 255,607 - BPHYT_RS20920 0.29 -0.6 255,618 + BPHYT_RS20920 0.32 -0.1 255,836 + BPHYT_RS20920 0.71 +0.1 255,837 - BPHYT_RS20920 0.72 -0.1 255,837 - BPHYT_RS20920 0.72 +0.4 256,216 + +0.2 256,304 + +4.2
Or see this region's nucleotide sequence