Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_4247

Experiment: MBOA 2.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MBOA 2.5 mM
5,060,750	+				-0.0
5,060,750	+				-0.1
5,060,750	+				-0.3
5,060,751	-				+0.4
5,060,751	-				+0.7
5,060,751	-				-1.5
5,060,759	-				+0.3
5,060,759	-				+0.3
5,060,759	-				+1.5
5,060,759	-				-2.5
5,060,786	+				-0.1
5,060,808	+				-0.2
5,060,808	+				-0.1
5,060,808	+				+0.9
5,060,809	-				-0.4
5,060,809	-				+0.2
5,060,810	+				+0.4
5,060,810	+				-2.0
5,060,810	+				-1.4
5,060,810	+				-0.4
5,060,811	-				-0.1
5,060,811	-				-1.0
5,060,811	-				+0.5
5,060,811	-				+1.3
5,060,811	-				-0.1
5,060,811	-				+0.6
5,060,811	-				+0.8
5,060,881	+				-0.5
5,060,882	-				-1.0
5,060,911	+				-1.2
5,060,911	+				+0.9
5,060,911	+				-0.2
5,060,911	+				+1.4
5,060,912	-				+0.6
5,060,912	-				-0.3
5,060,912	-				+0.4
5,060,912	-				+0.1
5,060,912	-				-1.4
5,060,912	-				-0.7
5,061,014	+		Psyr_4246	0.19	-2.8
5,061,014	+		Psyr_4246	0.19	-2.3
5,061,015	-		Psyr_4246	0.19	-2.0
5,061,015	-		Psyr_4246	0.19	+0.3
5,061,015	-		Psyr_4246	0.19	-0.2
5,061,015	-		Psyr_4246	0.19	+0.1
5,061,015	-		Psyr_4246	0.19	-0.5
5,061,037	+		Psyr_4246	0.21	-1.4
5,061,037	+		Psyr_4246	0.21	-1.0
5,061,037	+		Psyr_4246	0.21	-0.5
5,061,038	-		Psyr_4246	0.22	-2.1
5,061,047	+		Psyr_4246	0.23	-0.1
5,061,047	+		Psyr_4246	0.23	-0.5
5,061,047	+		Psyr_4246	0.23	+0.3
5,061,047	+		Psyr_4246	0.23	+0.6
5,061,047	+		Psyr_4246	0.23	+0.8
5,061,047	+		Psyr_4246	0.23	-2.2
5,061,047	+		Psyr_4246	0.23	-0.1
5,061,047	+		Psyr_4246	0.23	+0.8
5,061,047	+		Psyr_4246	0.23	+0.9
5,061,047	+		Psyr_4246	0.23	+0.6
5,061,047	+		Psyr_4246	0.23	+0.7
5,061,047	+		Psyr_4246	0.23	+0.1
5,061,047	+		Psyr_4246	0.23	+1.9
5,061,047	+		Psyr_4246	0.23	-0.4
5,061,048	-		Psyr_4246	0.23	-0.4
5,061,048	-		Psyr_4246	0.23	+0.1
5,061,048	-		Psyr_4246	0.23	+0.2
5,061,048	-		Psyr_4246	0.23	-0.2
5,061,048	-		Psyr_4246	0.23	+1.2
5,061,048	-		Psyr_4246	0.23	-1.0
5,061,048	-		Psyr_4246	0.23	+0.6
5,061,067	-		Psyr_4246	0.25	+1.3
5,061,236	+		Psyr_4246	0.46	-0.7
5,061,237	-		Psyr_4246	0.46	-1.2
5,061,237	-		Psyr_4246	0.46	-0.8
5,061,256	-		Psyr_4246	0.49	+0.2
5,061,279	+		Psyr_4246	0.51	-0.5
5,061,279	+		Psyr_4246	0.51	+0.1
5,061,279	+		Psyr_4246	0.51	+1.4
5,061,280	-		Psyr_4246	0.51	+0.6
5,061,280	-		Psyr_4246	0.51	-0.4
5,061,280	-		Psyr_4246	0.51	-0.9
5,061,300	+		Psyr_4246	0.54	+2.2
5,061,313	-		Psyr_4246	0.56	+0.3
5,061,313	-		Psyr_4246	0.56	-1.3
5,061,460	+		Psyr_4246	0.74	-0.8
5,061,461	-		Psyr_4246	0.74	-0.2
5,061,461	-		Psyr_4246	0.74	+1.6
5,061,499	+		Psyr_4246	0.79	-1.0
5,061,500	-		Psyr_4246	0.79	+0.4
5,061,555	-		Psyr_4246	0.85	+0.1
5,061,555	-		Psyr_4246	0.85	-1.3
5,061,558	+		Psyr_4246	0.86	-0.7
5,061,558	+		Psyr_4246	0.86	-0.8
5,061,558	+		Psyr_4246	0.86	-2.1
5,061,559	-		Psyr_4246	0.86	-0.1
5,061,559	-		Psyr_4246	0.86	-0.2
5,061,559	-		Psyr_4246	0.86	-0.2
5,061,559	-		Psyr_4246	0.86	-0.6
5,061,602	+				+0.4
5,061,602	+				-1.1
5,061,718	+				-0.6
5,061,719	-				-3.0
5,061,721	-				-1.1
5,061,741	+				-0.8
5,061,741	+				+0.6
5,061,742	-				-2.3
5,061,742	-				+0.1
5,061,742	-				-0.4
5,061,742	-				+0.1
5,061,742	-				+0.8
5,061,786	+				-0.4
5,061,786	+				+0.0
5,061,798	+				-1.5
5,061,798	+				-1.2
5,061,819	+				-0.4
5,061,819	+				+1.2
5,061,819	+				-2.1
5,061,819	+				-1.1
5,061,820	-				+0.7
5,061,820	-				-2.1
5,061,820	-				-0.3
5,061,820	-				+1.8
5,061,820	-				+1.8
5,061,820	-				+1.2
5,061,820	-				+1.4
5,061,858	+		Psyr_4247	0.11	-0.4
5,061,858	+		Psyr_4247	0.11	-1.6
5,061,858	+		Psyr_4247	0.11	-0.8
5,061,859	-		Psyr_4247	0.11	-0.2
5,061,859	-		Psyr_4247	0.11	-1.4
5,061,864	+		Psyr_4247	0.11	-0.1
5,061,864	+		Psyr_4247	0.11	-0.5
5,061,864	+		Psyr_4247	0.11	-1.1
5,061,864	+		Psyr_4247	0.11	-0.4
5,061,865	-		Psyr_4247	0.11	-0.5
5,061,873	+		Psyr_4247	0.12	-0.7
5,061,873	+		Psyr_4247	0.12	-0.1
5,061,873	+		Psyr_4247	0.12	-0.2
5,061,874	-		Psyr_4247	0.12	-0.8
5,062,011	+		Psyr_4247	0.24	+0.1
5,062,011	+		Psyr_4247	0.24	-1.5
5,062,011	+		Psyr_4247	0.24	+0.4
5,062,011	+		Psyr_4247	0.24	-0.4
5,062,011	+		Psyr_4247	0.24	+0.7
5,062,011	+		Psyr_4247	0.24	-0.5
5,062,011	+		Psyr_4247	0.24	+1.2
5,062,011	+		Psyr_4247	0.24	+0.4
5,062,011	+		Psyr_4247	0.24	+1.0
5,062,012	-		Psyr_4247	0.24	+1.2
5,062,012	-		Psyr_4247	0.24	+0.2
5,062,012	-		Psyr_4247	0.24	-1.0
5,062,012	-		Psyr_4247	0.24	-1.3
5,062,012	-		Psyr_4247	0.24	-0.5
5,062,012	-		Psyr_4247	0.24	+0.7
5,062,012	-		Psyr_4247	0.24	-0.1
5,062,014	-		Psyr_4247	0.24	-1.8
5,062,056	-		Psyr_4247	0.28	-0.5
5,062,173	+		Psyr_4247	0.38	+0.5
5,062,173	+		Psyr_4247	0.38	-1.0
5,062,173	+		Psyr_4247	0.38	-1.6
5,062,173	+		Psyr_4247	0.38	+0.1
5,062,173	+		Psyr_4247	0.38	+0.4
5,062,173	+		Psyr_4247	0.38	+2.4
5,062,174	-		Psyr_4247	0.38	-0.4
5,062,203	+		Psyr_4247	0.40	-2.4
5,062,203	+		Psyr_4247	0.40	-0.2
5,062,203	+		Psyr_4247	0.40	-0.5
5,062,203	+		Psyr_4247	0.40	-1.6
5,062,203	+		Psyr_4247	0.40	+0.0
5,062,203	+		Psyr_4247	0.40	-0.4
5,062,203	+		Psyr_4247	0.40	-2.2
5,062,203	+		Psyr_4247	0.40	-1.4
5,062,203	+		Psyr_4247	0.40	-0.8
5,062,203	+				-0.2
5,062,204	-		Psyr_4247	0.40	+2.1
5,062,204	-		Psyr_4247	0.40	+0.0
5,062,204	-		Psyr_4247	0.40	-1.4
5,062,204	-		Psyr_4247	0.40	-0.5
5,062,479	+		Psyr_4247	0.64	-1.5
5,062,479	+		Psyr_4247	0.64	-0.9
5,062,479	+		Psyr_4247	0.64	-0.8
5,062,479	+		Psyr_4247	0.64	-0.3
5,062,479	+		Psyr_4247	0.64	+0.2
5,062,480	-		Psyr_4247	0.64	-1.0
5,062,480	-		Psyr_4247	0.64	-0.7
5,062,480	-		Psyr_4247	0.64	+0.9
5,062,563	+		Psyr_4247	0.71	+1.4
5,062,563	+		Psyr_4247	0.71	-1.1
5,062,564	-		Psyr_4247	0.71	+0.1
5,062,574	-		Psyr_4247	0.72	-1.1
5,062,605	+		Psyr_4247	0.75	+0.8
5,062,656	+		Psyr_4247	0.79	-1.4
5,062,738	-		Psyr_4247	0.86	-0.5
5,062,740	+		Psyr_4247	0.86	+0.4
5,062,741	-		Psyr_4247	0.87	-0.6
5,062,741	-		Psyr_4247	0.87	+0.4
5,062,779	+		Psyr_4247	0.90	-0.3
5,062,779	+		Psyr_4247	0.90	+0.1
5,062,780	-		Psyr_4247	0.90	+0.4
5,062,802	-				+0.2
5,062,872	+				+0.2
5,062,872	+				-0.6
5,062,872	+				+0.3
5,062,872	+				-0.1
5,062,873	-				-0.5
5,062,873	-				+0.4
5,062,873	-				+0.0
5,062,873	-				+2.7
5,062,873	-				-0.6
5,062,875	+				+0.4
5,062,875	+				+0.1
5,062,875	+				+0.4
5,062,875	+				-0.2
5,062,875	+				-0.3
5,062,875	+				+0.1
5,062,875	+				+0.8
5,062,876	-				-0.3
5,062,876	-				-0.1
5,062,940	-				-1.6
5,062,940	-				+1.4
5,062,959	-				+0.1
5,062,978	+				-1.3
5,062,979	-				-0.5
5,063,055	-				+0.8
5,063,055	-				+0.8
5,063,055	-				+0.0
5,063,055	-				-0.3
5,063,104	-				-0.5
5,063,260	+				+0.1
5,063,260	+				+0.3
5,063,260	+				-0.2
5,063,260	+				-0.0
5,063,261	-				-0.6
5,063,261	-				-0.9
5,063,331	+				-1.6
5,063,332	-				-2.6
5,063,360	-				+0.0
5,063,549	+				+0.8
5,063,549	+				+0.4
5,063,549	+				+0.5
5,063,549	+				+0.5
5,063,549	+				+0.3
5,063,549	+				+0.8
5,063,549	+				+1.1
5,063,549	+				+0.0
5,063,549	+				+0.8
5,063,549	+				+0.5
5,063,550	-				-0.1
5,063,550	-				-0.1
5,063,550	-				+0.1
5,063,550	-				+1.1
5,063,550	-				-0.5
5,063,550	-				+1.2
5,063,550	-				+0.8
5,063,550	-				+0.0
5,063,550	-				-0.0
5,063,550	-				+1.5
5,063,550	-				+0.5
5,063,550	-				+1.9
5,063,550	-				-0.7
5,063,554	-				-0.8
5,063,577	+				+0.2
5,063,577	+				+1.0
5,063,577	+				+0.6
5,063,578	-				-0.3
5,063,578	-				-1.6
5,063,594	+				-1.8
5,063,594	+				-1.4
5,063,594	+				+0.7
5,063,594	+				-0.4
5,063,594	+				-1.6
5,063,594	+				+0.4
5,063,595	-				-2.1
5,063,595	-				-0.3
5,063,638	+				-1.4
5,063,701	-		Psyr_4248	0.12	+1.5
5,063,701	-		Psyr_4248	0.12	-0.7
5,063,701	-		Psyr_4248	0.12	-1.8
5,063,748	+		Psyr_4248	0.14	-0.4
5,063,748	+		Psyr_4248	0.14	+0.6
5,063,748	+		Psyr_4248	0.14	+0.8
5,063,748	+		Psyr_4248	0.14	-1.1
5,063,748	+		Psyr_4248	0.14	-1.4
5,063,748	+		Psyr_4248	0.14	+0.1
5,063,749	-		Psyr_4248	0.14	+0.7
5,063,749	-		Psyr_4248	0.14	-0.3
5,063,749	-		Psyr_4248	0.14	-1.2
5,063,749	-		Psyr_4248	0.14	-0.3
5,063,749	-		Psyr_4248	0.14	-0.0
5,063,759	+		Psyr_4248	0.15	-0.4
5,063,759	+		Psyr_4248	0.15	+1.0
5,063,759	+		Psyr_4248	0.15	-0.6
5,063,759	+		Psyr_4248	0.15	+0.3
5,063,760	-		Psyr_4248	0.15	+0.6
5,063,760	-		Psyr_4248	0.15	+1.0
5,063,760	-		Psyr_4248	0.15	+0.0
5,063,760	-		Psyr_4248	0.15	+0.5
5,063,760	-		Psyr_4248	0.15	+0.2
5,063,760	-		Psyr_4248	0.15	-0.6
5,063,760	-		Psyr_4248	0.15	+0.8
5,063,825	+		Psyr_4248	0.17	-0.7
5,063,825	+		Psyr_4248	0.17	+0.6
5,063,826	-		Psyr_4248	0.17	-0.9
5,063,826	-		Psyr_4248	0.17	+0.1
5,063,826	-		Psyr_4248	0.17	-1.2
5,063,852	-		Psyr_4248	0.19	+0.2
5,063,866	+		Psyr_4248	0.19	+1.1