Experiment: MBOA 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4135 and Psyr_4136 are separated by 22 nucleotides Psyr_4136 and Psyr_4137 are separated by 115 nucleotides Psyr_4137 and Psyr_4138 overlap by 4 nucleotides Psyr_4138 and Psyr_4139 are separated by 10 nucleotides Psyr_4139 and Psyr_4140 overlap by 1 nucleotides
Psyr_4135: Psyr_4135 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase, at 4,926,055 to 4,927,320
_4135
Psyr_4136: Psyr_4136 - BolA-like protein, at 4,927,343 to 4,927,582
_4136
Psyr_4137: Psyr_4137 - Sulfate transporter/antisigma-factor antagonist STAS, at 4,927,698 to 4,928,003
_4137
Psyr_4138: Psyr_4138 - Toluene tolerance, at 4,928,000 to 4,928,650
_4138
Psyr_4139: Psyr_4139 - Mce4/Rv3499c/MTV023.06c protein, at 4,928,661 to 4,929,128
_4139
Psyr_4140: Psyr_4140 - Protein of unknown function DUF140, at 4,929,128 to 4,929,925
_4140
Position (kb) 4927
4928
4929 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 4927.435 kb on - strand, within Psyr_4136 at 4927.435 kb on - strand, within Psyr_4136 at 4927.435 kb on - strand, within Psyr_4136 at 4927.435 kb on - strand, within Psyr_4136 at 4927.435 kb on - strand, within Psyr_4136 at 4927.741 kb on - strand, within Psyr_4137 at 4928.214 kb on + strand, within Psyr_4138 at 4928.331 kb on + strand, within Psyr_4138 at 4928.332 kb on - strand, within Psyr_4138 at 4928.404 kb on - strand, within Psyr_4138 at 4928.404 kb on - strand, within Psyr_4138 at 4928.404 kb on - strand, within Psyr_4138 at 4928.478 kb on + strand, within Psyr_4138 at 4928.479 kb on - strand, within Psyr_4138 at 4928.479 kb on - strand, within Psyr_4138 at 4928.479 kb on - strand, within Psyr_4138 at 4928.503 kb on - strand, within Psyr_4138 at 4928.503 kb on - strand, within Psyr_4138 at 4928.503 kb on - strand, within Psyr_4138 at 4928.618 kb on + strand at 4928.619 kb on - strand at 4928.642 kb on - strand at 4928.642 kb on - strand at 4928.679 kb on - strand at 4928.679 kb on - strand at 4928.685 kb on - strand at 4928.685 kb on - strand at 4928.744 kb on + strand, within Psyr_4139 at 4928.797 kb on + strand, within Psyr_4139 at 4928.797 kb on + strand, within Psyr_4139 at 4928.797 kb on + strand, within Psyr_4139 at 4928.797 kb on + strand, within Psyr_4139 at 4928.798 kb on - strand, within Psyr_4139 at 4928.798 kb on - strand, within Psyr_4139 at 4928.900 kb on + strand, within Psyr_4139 at 4928.955 kb on + strand, within Psyr_4139 at 4928.955 kb on + strand, within Psyr_4139 at 4928.955 kb on + strand, within Psyr_4139 at 4928.955 kb on + strand, within Psyr_4139 at 4928.956 kb on - strand, within Psyr_4139 at 4928.956 kb on - strand, within Psyr_4139 at 4928.995 kb on + strand, within Psyr_4139 at 4928.995 kb on + strand, within Psyr_4139 at 4928.995 kb on + strand, within Psyr_4139 at 4928.995 kb on + strand, within Psyr_4139 at 4928.996 kb on - strand, within Psyr_4139 at 4928.996 kb on - strand, within Psyr_4139 at 4929.001 kb on + strand, within Psyr_4139 at 4929.002 kb on - strand, within Psyr_4139 at 4929.008 kb on + strand, within Psyr_4139 at 4929.011 kb on - strand, within Psyr_4139 at 4929.011 kb on - strand, within Psyr_4139 at 4929.011 kb on - strand, within Psyr_4139 at 4929.290 kb on + strand, within Psyr_4140 at 4929.290 kb on + strand, within Psyr_4140 at 4929.290 kb on + strand, within Psyr_4140 at 4929.372 kb on + strand, within Psyr_4140 at 4929.489 kb on + strand, within Psyr_4140 at 4929.489 kb on + strand, within Psyr_4140
Per-strain Table
Position Strand Gene LocusTag Fraction MBOA 2.5 mM remove 4,927,435 - Psyr_4136 0.38 +0.2 4,927,435 - Psyr_4136 0.38 -1.9 4,927,435 - Psyr_4136 0.38 -0.2 4,927,435 - Psyr_4136 0.38 +0.4 4,927,435 - Psyr_4136 0.38 -2.1 4,927,741 - Psyr_4137 0.14 -1.8 4,928,214 + Psyr_4138 0.33 +0.4 4,928,331 + Psyr_4138 0.51 -0.8 4,928,332 - Psyr_4138 0.51 -0.6 4,928,404 - Psyr_4138 0.62 -1.9 4,928,404 - Psyr_4138 0.62 +0.6 4,928,404 - Psyr_4138 0.62 +0.1 4,928,478 + Psyr_4138 0.73 +2.4 4,928,479 - Psyr_4138 0.74 -0.7 4,928,479 - Psyr_4138 0.74 +0.6 4,928,479 - Psyr_4138 0.74 -1.2 4,928,503 - Psyr_4138 0.77 +0.4 4,928,503 - Psyr_4138 0.77 +0.4 4,928,503 - Psyr_4138 0.77 +1.4 4,928,618 + +0.4 4,928,619 - +0.4 4,928,642 - +2.4 4,928,642 - +3.0 4,928,679 - +0.4 4,928,679 - +1.4 4,928,685 - +1.4 4,928,685 - +0.4 4,928,744 + Psyr_4139 0.18 +0.4 4,928,797 + Psyr_4139 0.29 +0.4 4,928,797 + Psyr_4139 0.29 +1.4 4,928,797 + Psyr_4139 0.29 +1.4 4,928,797 + Psyr_4139 0.29 +0.4 4,928,798 - Psyr_4139 0.29 +1.4 4,928,798 - Psyr_4139 0.29 +0.4 4,928,900 + Psyr_4139 0.51 +1.4 4,928,955 + Psyr_4139 0.63 +0.8 4,928,955 + Psyr_4139 0.63 +1.4 4,928,955 + Psyr_4139 0.63 +1.4 4,928,955 + Psyr_4139 0.63 -0.4 4,928,956 - Psyr_4139 0.63 +0.4 4,928,956 - Psyr_4139 0.63 -0.6 4,928,995 + Psyr_4139 0.71 -0.2 4,928,995 + Psyr_4139 0.71 +0.4 4,928,995 + Psyr_4139 0.71 -0.9 4,928,995 + Psyr_4139 0.71 +1.4 4,928,996 - Psyr_4139 0.72 +1.4 4,928,996 - Psyr_4139 0.72 -0.2 4,929,001 + Psyr_4139 0.73 -0.2 4,929,002 - Psyr_4139 0.73 +0.4 4,929,008 + Psyr_4139 0.74 -0.5 4,929,011 - Psyr_4139 0.75 +1.4 4,929,011 - Psyr_4139 0.75 -0.2 4,929,011 - Psyr_4139 0.75 +1.4 4,929,290 + Psyr_4140 0.20 +2.0 4,929,290 + Psyr_4140 0.20 -1.8 4,929,290 + Psyr_4140 0.20 +0.4 4,929,372 + Psyr_4140 0.31 +0.3 4,929,489 + Psyr_4140 0.45 +0.8 4,929,489 + Psyr_4140 0.45 +2.4
Or see this region's nucleotide sequence