Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3574

Experiment: MBOA 2.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MBOA 2.5 mM
4,255,452	+		Psyr_3572	0.88	+0.7
4,255,452	+		Psyr_3572	0.88	-0.6
4,255,453	-		Psyr_3572	0.88	-0.6
4,255,453	-		Psyr_3572	0.88	+0.4
4,255,453	-		Psyr_3572	0.88	-0.2
4,255,605	+				-0.7
4,255,605	+				-0.9
4,255,605	+				+0.3
4,255,605	+				-1.5
4,255,605	+				-2.4
4,255,605	+				-0.2
4,255,606	-				+0.1
4,255,606	-				-0.6
4,255,606	-				-0.9
4,255,606	-				-0.0
4,255,606	-				+1.4
4,255,606	-				-0.2
4,255,617	+				-0.7
4,255,617	+				-0.2
4,255,617	+				-1.1
4,255,617	+				+0.9
4,255,618	-				+0.2
4,255,618	-				-0.2
4,255,618	-				-1.3
4,255,618	-				-1.3
4,255,639	+				-0.1
4,255,695	-				-0.5
4,255,706	+				+0.5
4,255,718	+				-0.6
4,255,718	+				-1.8
4,255,767	+				+0.1
4,255,767	+				-0.6
4,255,768	-				+0.2
4,255,871	-				+0.9
4,255,874	-				+0.2
4,255,884	+				-0.5
4,255,908	-				+0.3
4,255,908	-				+0.7
4,255,909	+				+0.6
4,255,909	+				+0.3
4,255,909	+				-0.3
4,255,909	+				+0.4
4,255,909	+				-0.8
4,255,909	+				-0.7
4,255,909	+				+0.3
4,255,909	+				+1.4
4,255,909	+				-0.1
4,255,909	+				-0.7
4,255,910	-				+0.6
4,255,910	-				+0.1
4,255,910	-				-0.7
4,255,910	-				+0.6
4,255,910	-				+1.2
4,255,910	-				-2.4
4,255,910	-				-1.3
4,255,910	-				+1.3
4,255,910	-				+0.8
4,255,911	+				-0.9
4,255,911	+				+0.1
4,255,911	+				+0.1
4,255,911	+				+1.0
4,255,912	-				+1.4
4,255,912	-				+0.4
4,255,912	-				-1.4
4,255,912	-				+0.4
4,255,932	+				+0.1
4,255,932	+				-1.1
4,255,932	+				-0.4
4,255,932	+				-1.2
4,255,932	+				+0.1
4,255,932	+				-0.2
4,255,932	+				+0.3
4,255,933	-				+0.5
4,255,933	-				+0.6
4,255,933	-				+0.3
4,255,933	-				+0.9
4,256,083	+				+0.1
4,256,083	+				+2.2
4,256,083	+				-0.5
4,256,084	-				-0.0
4,256,086	+				-1.7
4,256,114	+		Psyr_3573	0.15	-0.1
4,256,114	+		Psyr_3573	0.15	-0.3
4,256,178	+		Psyr_3573	0.39	+0.4
4,256,178	+		Psyr_3573	0.39	+0.1
4,256,178	+		Psyr_3573	0.39	-0.3
4,256,178	+		Psyr_3573	0.39	+0.4
4,256,179	-		Psyr_3573	0.40	-0.4
4,256,180	+		Psyr_3573	0.40	+1.2
4,256,180	+		Psyr_3573	0.40	-0.6
4,256,180	+		Psyr_3573	0.40	-1.6
4,256,180	+		Psyr_3573	0.40	-0.0
4,256,180	+		Psyr_3573	0.40	+1.7
4,256,180	+		Psyr_3573	0.40	+0.1
4,256,180	+		Psyr_3573	0.40	+0.1
4,256,180	+		Psyr_3573	0.40	-2.0
4,256,180	+		Psyr_3573	0.40	-0.4
4,256,180	+		Psyr_3573	0.40	-0.8
4,256,180	+		Psyr_3573	0.40	-0.4
4,256,180	+		Psyr_3573	0.40	+0.7
4,256,180	+		Psyr_3573	0.40	-0.4
4,256,180	+		Psyr_3573	0.40	+0.1
4,256,180	+		Psyr_3573	0.40	+0.5
4,256,180	+		Psyr_3573	0.40	+1.0
4,256,180	+		Psyr_3573	0.40	-0.8
4,256,181	-		Psyr_3573	0.40	+0.0
4,256,181	-		Psyr_3573	0.40	-0.6
4,256,181	-		Psyr_3573	0.40	-0.2
4,256,181	-		Psyr_3573	0.40	-0.7
4,256,181	-				-0.5
4,256,181	-		Psyr_3573	0.40	+0.4
4,256,181	-		Psyr_3573	0.40	+1.7
4,256,181	-		Psyr_3573	0.40	-0.9
4,256,181	-		Psyr_3573	0.40	+1.0
4,256,181	-		Psyr_3573	0.40	+0.8
4,256,181	-				-0.9
4,256,181	-		Psyr_3573	0.40	+1.1
4,256,181	-		Psyr_3573	0.40	-0.0
4,256,181	-		Psyr_3573	0.40	-0.1
4,256,181	-		Psyr_3573	0.40	-0.6
4,256,184	+		Psyr_3573	0.42	-0.3
4,256,213	+		Psyr_3573	0.52	-1.4
4,256,268	+		Psyr_3573	0.73	+0.9
4,256,268	+		Psyr_3573	0.73	-0.4
4,256,268	+		Psyr_3573	0.73	+1.2
4,256,268	+		Psyr_3573	0.73	-1.1
4,256,268	+		Psyr_3573	0.73	+0.2
4,256,268	+		Psyr_3573	0.73	+0.6
4,256,269	-		Psyr_3573	0.73	+0.2
4,256,269	-		Psyr_3573	0.73	-0.4
4,256,269	-		Psyr_3573	0.73	+0.3
4,256,269	-		Psyr_3573	0.73	+0.1
4,256,269	-		Psyr_3573	0.73	+0.6
4,256,269	-		Psyr_3573	0.73	+1.1
4,256,383	-				-0.1
4,256,394	+				-2.1
4,256,394	+				-0.1
4,256,396	+				-0.6
4,256,396	+				+0.1
4,256,396	+				-0.8
4,256,396	+				-1.4
4,256,396	+				+0.5
4,256,396	+				+0.3
4,256,396	+				-0.2
4,256,396	+				-0.0
4,256,396	+				-1.6
4,256,396	+				+0.6
4,256,396	+				+0.1
4,256,396	+				+0.6
4,256,396	+				+0.1
4,256,396	+				+0.1
4,256,397	-				-1.1
4,256,397	-				-0.0
4,256,397	-				-1.6
4,256,397	-				-1.1
4,256,397	-				-2.8
4,256,397	-				+1.4
4,256,397	-				-2.5
4,256,397	-				-1.2
4,256,397	-				+0.2
4,256,397	-				+0.2
4,256,397	-				-2.0
4,256,398	+				-1.2
4,256,398	+				+0.2
4,256,398	+				-0.5
4,256,398	+				-0.1
4,256,398	+				-0.2
4,256,398	+				-1.6
4,256,398	+				+0.6
4,256,398	+				-0.4
4,256,398	+				-0.1
4,256,398	+				+0.6
4,256,398	+				+0.7
4,256,398	+				-0.6
4,256,399	-				+0.5
4,256,399	-				-0.4
4,256,399	-				+0.6
4,256,399	-				-0.7
4,256,399	-				+1.0
4,256,399	-				-1.2
4,256,399	-				-0.6
4,256,452	-				-0.1
4,256,452	-				-1.0
4,256,494	-				-0.2
4,256,521	+				-0.5
4,256,521	+				-0.7
4,256,521	+				-0.5
4,256,521	+				+0.6
4,256,521	+				+0.1
4,256,522	-				+0.5
4,256,546	+				-0.4
4,256,546	+				-0.5
4,256,574	+				+0.1
4,256,574	+				-0.6
4,256,615	-		Psyr_3574	0.10	-0.4
4,256,684	-		Psyr_3574	0.15	+0.2
4,256,735	+		Psyr_3574	0.18	-0.5
4,256,735	+		Psyr_3574	0.18	+0.9
4,256,735	+		Psyr_3574	0.18	+0.6
4,256,735	+		Psyr_3574	0.18	+0.3
4,256,735	+		Psyr_3574	0.18	-0.9
4,256,736	-		Psyr_3574	0.18	-1.0
4,256,772	+		Psyr_3574	0.20	-0.3
4,256,804	+		Psyr_3574	0.22	+1.1
4,256,805	-		Psyr_3574	0.22	-0.7
4,256,900	+		Psyr_3574	0.29	-0.1
4,256,900	+		Psyr_3574	0.29	-0.0
4,256,900	+		Psyr_3574	0.29	-1.2
4,256,900	+		Psyr_3574	0.29	+0.7
4,256,900	+		Psyr_3574	0.29	+0.9
4,256,901	-		Psyr_3574	0.29	-0.6
4,256,901	-		Psyr_3574	0.29	-0.3
4,256,901	-		Psyr_3574	0.29	-1.8
4,256,901	-		Psyr_3574	0.29	+0.2
4,256,901	-		Psyr_3574	0.29	-0.4
4,256,901	-		Psyr_3574	0.29	+3.4
4,256,901	-		Psyr_3574	0.29	-0.2
4,256,901	-		Psyr_3574	0.29	-0.2
4,256,902	+		Psyr_3574	0.29	-1.8
4,256,902	+		Psyr_3574	0.29	-0.5
4,256,902	+		Psyr_3574	0.29	-0.8
4,256,902	+		Psyr_3574	0.29	-0.2
4,256,902	+		Psyr_3574	0.29	+2.0
4,256,902	+		Psyr_3574	0.29	-0.1
4,256,902	+		Psyr_3574	0.29	-0.9
4,256,902	+		Psyr_3574	0.29	-0.2
4,256,902	+		Psyr_3574	0.29	-0.0
4,256,903	-		Psyr_3574	0.29	-0.1
4,256,903	-		Psyr_3574	0.29	+0.8
4,256,903	-		Psyr_3574	0.29	-1.4
4,256,903	-		Psyr_3574	0.29	+0.4
4,256,903	-		Psyr_3574	0.29	-1.2
4,256,903	-		Psyr_3574	0.29	+1.0
4,256,920	+		Psyr_3574	0.30	+0.3
4,256,931	+		Psyr_3574	0.30	+0.9
4,257,193	-		Psyr_3574	0.47	-0.9
4,257,410	-		Psyr_3574	0.61	-0.2
4,257,410	-		Psyr_3574	0.61	-0.4
4,257,447	+		Psyr_3574	0.63	-0.4
4,257,447	+		Psyr_3574	0.63	+0.3
4,257,447	+		Psyr_3574	0.63	-0.6
4,257,447	+		Psyr_3574	0.63	+0.1
4,257,447	+		Psyr_3574	0.63	+1.6
4,257,447	+		Psyr_3574	0.63	-0.1
4,257,447	+		Psyr_3574	0.63	+0.7
4,257,447	+		Psyr_3574	0.63	+0.3
4,257,447	+		Psyr_3574	0.63	+0.1
4,257,448	-		Psyr_3574	0.63	-1.2
4,257,448	-		Psyr_3574	0.63	+2.0
4,257,448	-		Psyr_3574	0.63	-0.7
4,257,448	-		Psyr_3574	0.63	-1.8
4,257,448	-		Psyr_3574	0.63	-1.0
4,257,448	-		Psyr_3574	0.63	+0.1
4,257,448	-		Psyr_3574	0.63	+0.3
4,257,448	-		Psyr_3574	0.63	-0.6
4,257,448	-		Psyr_3574	0.63	-0.2
4,257,448	-		Psyr_3574	0.63	-0.5
4,257,719	-		Psyr_3574	0.80	+0.1
4,257,903	+				-0.3
4,257,903	+				+0.6
4,257,903	+				+1.1
4,257,903	+				-0.6
4,257,903	+				+0.0
4,257,903	+				-1.3
4,257,904	-				+0.1
4,257,904	-				+0.2
4,257,904	-				-0.2
4,257,904	-				+0.0
4,257,958	-				-0.6
4,258,086	-				-1.8
4,258,086	-				-0.4
4,258,086	-				-0.2
4,258,086	-				+1.1
4,258,250	+				+0.8
4,258,308	+				+0.6
4,258,308	+				-0.3
4,258,308	+				-1.6
4,258,348	-				-0.6
4,258,428	+		Psyr_3575	0.17	-0.6
4,258,428	+		Psyr_3575	0.17	+0.6
4,258,428	+		Psyr_3575	0.17	-0.5
4,258,629	+		Psyr_3575	0.42	+0.9
4,258,629	+		Psyr_3575	0.42	-0.2
4,258,629	+		Psyr_3575	0.42	-0.6
4,258,630	-		Psyr_3575	0.42	+0.4
4,258,660	+		Psyr_3575	0.46	+1.3
4,258,660	+		Psyr_3575	0.46	+0.1
4,258,660	+		Psyr_3575	0.46	-0.6
4,258,660	+		Psyr_3575	0.46	+0.8
4,258,661	-		Psyr_3575	0.46	-0.5
4,258,661	-		Psyr_3575	0.46	+0.8
4,258,716	+		Psyr_3575	0.53	-1.0
4,258,758	+		Psyr_3575	0.58	+0.7
4,258,759	-		Psyr_3575	0.58	-0.9
4,258,806	-		Psyr_3575	0.64	-0.7
4,258,866	+		Psyr_3575	0.72	+0.1
4,258,866	+		Psyr_3575	0.72	+0.0
4,258,867	-		Psyr_3575	0.72	-0.9
4,258,867	-		Psyr_3575	0.72	+1.1
4,258,867	-		Psyr_3575	0.72	+1.8
4,258,867	-		Psyr_3575	0.72	+0.9
4,258,867	-		Psyr_3575	0.72	+0.5
4,258,867	-		Psyr_3575	0.72	-1.2
4,258,867	-		Psyr_3575	0.72	-0.1
4,258,956	+		Psyr_3575	0.83	+0.2
4,258,956	+		Psyr_3575	0.83	-1.5
4,258,956	+		Psyr_3575	0.83	+0.3
4,258,956	+		Psyr_3575	0.83	+0.3
4,258,957	-		Psyr_3575	0.83	+1.3