Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1444

Experiment: MBOA 2.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MBOA 2.5 mM
1,632,824	+		Psyr_1442	0.81	-0.0
1,632,824	+		Psyr_1442	0.81	-0.3
1,632,824	+		Psyr_1442	0.81	-0.4
1,632,824	+		Psyr_1442	0.81	+0.1
1,632,824	+		Psyr_1442	0.81	-0.5
1,632,824	+		Psyr_1442	0.81	+0.8
1,632,824	+		Psyr_1442	0.81	-0.7
1,632,824	+		Psyr_1442	0.81	+0.1
1,632,825	-		Psyr_1442	0.81	-0.8
1,632,825	-		Psyr_1442	0.81	-0.7
1,632,825	-		Psyr_1442	0.81	+0.2
1,632,845	+		Psyr_1442	0.82	-0.2
1,632,845	+		Psyr_1442	0.82	-0.8
1,632,845	+		Psyr_1442	0.82	+0.5
1,632,846	-		Psyr_1442	0.82	-0.5
1,632,846	-		Psyr_1442	0.82	+0.4
1,632,846	-		Psyr_1442	0.82	+0.4
1,632,876	-		Psyr_1442	0.83	-0.2
1,632,900	+		Psyr_1442	0.84	+0.1
1,633,061	+		Psyr_1442	0.89	-1.0
1,633,106	+				-0.9
1,633,106	+				-1.0
1,633,107	-				+0.8
1,633,321	+				+0.0
1,633,321	+				-0.5
1,633,321	+				-2.6
1,633,322	-				-1.4
1,633,323	+				+0.3
1,633,387	+				+0.2
1,633,387	+				-0.1
1,633,387	+				+0.3
1,633,388	-				+0.1
1,633,417	+				+0.3
1,633,418	-				-1.9
1,633,432	+				-0.9
1,633,433	-		Psyr_1443	0.11	-0.6
1,633,453	+		Psyr_1443	0.15	+0.1
1,633,453	+		Psyr_1443	0.15	+0.8
1,633,454	-		Psyr_1443	0.16	-2.1
1,633,501	+				-2.1
1,633,501	+		Psyr_1443	0.26	+0.8
1,633,501	+		Psyr_1443	0.26	+0.1
1,633,501	+		Psyr_1443	0.26	-1.3
1,633,501	+		Psyr_1443	0.26	+0.0
1,633,501	+		Psyr_1443	0.26	+1.1
1,633,501	+		Psyr_1443	0.26	+0.3
1,633,501	+		Psyr_1443	0.26	+0.4
1,633,501	+		Psyr_1443	0.26	+0.2
1,633,501	+		Psyr_1443	0.26	+0.2
1,633,501	+		Psyr_1443	0.26	+0.7
1,633,501	+		Psyr_1443	0.26	+0.1
1,633,501	+		Psyr_1443	0.26	-0.5
1,633,501	+		Psyr_1443	0.26	-0.7
1,633,501	+		Psyr_1443	0.26	-0.6
1,633,501	+		Psyr_1443	0.26	-0.6
1,633,501	+		Psyr_1443	0.26	+0.2
1,633,501	+		Psyr_1443	0.26	+1.2
1,633,501	+		Psyr_1443	0.26	-0.4
1,633,501	+		Psyr_1443	0.26	-1.3
1,633,501	+		Psyr_1443	0.26	-0.3
1,633,502	-		Psyr_1443	0.26	-0.3
1,633,502	-		Psyr_1443	0.26	-0.1
1,633,502	-		Psyr_1443	0.26	-1.6
1,633,502	-		Psyr_1443	0.26	-1.5
1,633,502	-		Psyr_1443	0.26	+0.0
1,633,502	-		Psyr_1443	0.26	-1.4
1,633,502	-		Psyr_1443	0.26	+0.1
1,633,502	-		Psyr_1443	0.26	-0.6
1,633,502	-		Psyr_1443	0.26	-3.2
1,633,502	-		Psyr_1443	0.26	-1.4
1,633,502	-		Psyr_1443	0.26	-2.7
1,633,502	-		Psyr_1443	0.26	-0.4
1,633,502	-		Psyr_1443	0.26	+0.4
1,633,502	-		Psyr_1443	0.26	+1.0
1,633,502	-		Psyr_1443	0.26	-0.6
1,633,502	-		Psyr_1443	0.26	+0.6
1,633,502	-		Psyr_1443	0.26	-0.7
1,633,502	-		Psyr_1443	0.26	+0.0
1,633,502	-		Psyr_1443	0.26	+0.6
1,633,543	+		Psyr_1443	0.35	-0.8
1,633,543	+		Psyr_1443	0.35	-0.4
1,633,543	+		Psyr_1443	0.35	-0.2
1,633,543	+		Psyr_1443	0.35	+0.4
1,633,543	+		Psyr_1443	0.35	+3.1
1,633,544	-		Psyr_1443	0.35	-1.7
1,633,544	-		Psyr_1443	0.35	-0.0
1,633,571	-		Psyr_1443	0.41	+0.3
1,633,606	-		Psyr_1443	0.49	-0.9
1,633,783	+		Psyr_1443	0.88	+1.4
1,633,783	+		Psyr_1443	0.88	+0.7
1,633,783	+		Psyr_1443	0.88	+0.8
1,633,783	+		Psyr_1443	0.88	+0.3
1,633,783	+		Psyr_1443	0.88	-1.5
1,633,783	+		Psyr_1443	0.88	+3.0
1,633,784	-		Psyr_1443	0.88	+1.4
1,633,784	-		Psyr_1443	0.88	-0.2
1,633,784	-		Psyr_1443	0.88	+1.2
1,633,784	-		Psyr_1443	0.88	+0.6
1,633,784	-		Psyr_1443	0.88	-2.8
1,633,856	+				-0.1
1,633,857	-				+0.4
1,633,857	-				-0.9
1,633,857	-				-0.7
1,633,857	-				+0.3
1,633,940	+				+1.6
1,633,940	+				-0.2
1,633,940	+				+0.0
1,633,940	+				+0.5
1,633,940	+				-0.2
1,633,940	+				+1.5
1,633,940	+				-0.0
1,633,940	+				+0.6
1,633,940	+				+0.0
1,633,940	+				-0.2
1,633,940	+				-0.7
1,633,940	+				-0.9
1,633,940	+				-0.4
1,633,940	+				-0.3
1,633,940	+				+0.3
1,633,941	-				+0.1
1,633,941	-				+0.1
1,633,941	-				+0.7
1,634,078	+		Psyr_1444	0.18	-0.9
1,634,078	+		Psyr_1444	0.18	+0.8
1,634,078	+		Psyr_1444	0.18	+1.7
1,634,079	-		Psyr_1444	0.18	-0.6
1,634,079	-		Psyr_1444	0.18	-0.8
1,634,079	-		Psyr_1444	0.18	-1.8
1,634,079	-		Psyr_1444	0.18	-1.0
1,634,079	-		Psyr_1444	0.18	+0.4
1,634,159	+		Psyr_1444	0.23	-0.3
1,634,159	+		Psyr_1444	0.23	+1.3
1,634,159	+		Psyr_1444	0.23	-1.7
1,634,159	+		Psyr_1444	0.23	+0.3
1,634,160	-		Psyr_1444	0.23	-1.9
1,634,160	-		Psyr_1444	0.23	-3.2
1,634,194	-		Psyr_1444	0.25	-1.2
1,634,207	+		Psyr_1444	0.26	-0.2
1,634,208	-		Psyr_1444	0.26	+0.3
1,634,398	-		Psyr_1444	0.39	-1.1
1,634,420	-		Psyr_1444	0.41	-0.7
1,634,577	-		Psyr_1444	0.51	-2.1
1,634,577	-		Psyr_1444	0.51	+0.2
1,634,587	+		Psyr_1444	0.52	-0.7
1,634,588	-		Psyr_1444	0.52	-0.9
1,634,588	-		Psyr_1444	0.52	-0.6
1,634,588	-		Psyr_1444	0.52	+0.0
1,634,595	+		Psyr_1444	0.52	-0.9
1,634,596	-		Psyr_1444	0.53	-0.8
1,634,596	-		Psyr_1444	0.53	-0.8
1,634,671	+		Psyr_1444	0.58	-0.6
1,634,691	+		Psyr_1444	0.59	-0.6
1,634,692	-		Psyr_1444	0.59	-1.5
1,634,692	-		Psyr_1444	0.59	-0.6
1,634,702	+		Psyr_1444	0.60	-0.7
1,634,702	+		Psyr_1444	0.60	-0.6
1,634,703	-		Psyr_1444	0.60	+1.1
1,634,874	+		Psyr_1444	0.71	-1.2
1,634,874	+		Psyr_1444	0.71	+1.1
1,635,275	+				-0.2
1,635,275	+				-0.0
1,635,275	+				-0.7
1,635,275	+				-1.5
1,635,276	-				-1.1
1,635,276	-				+0.2
1,635,276	-				+0.8
1,635,291	+				-0.4
1,635,387	+		Psyr_1445	0.10	+0.4
1,635,387	+		Psyr_1445	0.10	+1.7
1,635,387	+		Psyr_1445	0.10	+1.0
1,635,388	-		Psyr_1445	0.11	-0.8
1,635,388	-		Psyr_1445	0.11	-0.2
1,635,388	-		Psyr_1445	0.11	+1.6
1,635,388	-		Psyr_1445	0.11	-0.5
1,635,388	-		Psyr_1445	0.11	-0.2
1,635,388	-		Psyr_1445	0.11	-2.7
1,635,430	-		Psyr_1445	0.15	-0.7
1,635,430	-		Psyr_1445	0.15	-0.3
1,635,430	-		Psyr_1445	0.15	+0.3
1,635,557	+		Psyr_1445	0.29	+0.8
1,635,557	+		Psyr_1445	0.29	+0.8
1,635,557	+		Psyr_1445	0.29	+0.6
1,635,558	-		Psyr_1445	0.29	+0.7
1,635,558	-		Psyr_1445	0.29	-1.2
1,635,558	-		Psyr_1445	0.29	-0.5
1,635,558	-		Psyr_1445	0.29	+0.3
1,635,578	+		Psyr_1445	0.31	+0.5
1,635,578	+				+1.6
1,635,578	+		Psyr_1445	0.31	+0.1
1,635,578	+				-0.0
1,635,579	-		Psyr_1445	0.31	+0.1
1,635,579	-		Psyr_1445	0.31	-1.2
1,635,669	+		Psyr_1445	0.41	+0.9
1,635,669	+		Psyr_1445	0.41	+1.5
1,635,669	+		Psyr_1445	0.41	+0.6
1,635,670	-		Psyr_1445	0.41	+0.5
1,635,670	-		Psyr_1445	0.41	+0.2
1,635,670	-		Psyr_1445	0.41	+1.2
1,635,811	+		Psyr_1445	0.56	+1.2
1,635,811	+		Psyr_1445	0.56	-0.2
1,635,812	-		Psyr_1445	0.56	+0.0
1,635,898	+		Psyr_1445	0.66	+0.6
1,635,898	+		Psyr_1445	0.66	-0.2
1,635,899	-		Psyr_1445	0.66	-0.4
1,635,965	+		Psyr_1445	0.73	-0.6
1,635,965	+		Psyr_1445	0.73	+1.0
1,635,966	-		Psyr_1445	0.73	-0.9
1,635,966	-		Psyr_1445	0.73	-0.3
1,635,966	-		Psyr_1445	0.73	-0.8
1,635,967	+		Psyr_1445	0.73	-1.1
1,635,967	+		Psyr_1445	0.73	+0.6
1,635,967	+		Psyr_1445	0.73	+0.2
1,635,967	+		Psyr_1445	0.73	-0.8
1,635,967	+		Psyr_1445	0.73	+0.3
1,635,968	-		Psyr_1445	0.73	-0.5
1,635,968	-		Psyr_1445	0.73	-2.8
1,635,968	-		Psyr_1445	0.73	+0.4
1,635,968	-		Psyr_1445	0.73	-0.1
1,635,968	-		Psyr_1445	0.73	-0.6
1,635,968	-		Psyr_1445	0.73	+1.1
1,635,987	+		Psyr_1445	0.75	-0.4
1,635,987	+		Psyr_1445	0.75	-0.2
1,635,987	+		Psyr_1445	0.75	+0.3
1,635,987	+		Psyr_1445	0.75	-0.1
1,635,987	+		Psyr_1445	0.75	-0.5
1,635,988	-		Psyr_1445	0.76	+0.9
1,636,178	+				-0.4
1,636,196	+				+0.2
1,636,197	-				-1.2
1,636,197	-				-3.1
1,636,284	-		Psyr_1446	0.11	-0.3
1,636,284	-		Psyr_1446	0.11	-1.0
1,636,284	-		Psyr_1446	0.11	-1.1
1,636,284	-		Psyr_1446	0.11	-0.5