Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1140

Experiment: MBOA 2.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MBOA 2.5 mM
1,290,613	+		Psyr_1139	0.82	+0.5
1,290,613	+		Psyr_1139	0.82	-0.4
1,290,613	+		Psyr_1139	0.82	-1.9
1,290,614	-		Psyr_1139	0.82	+0.4
1,290,624	+		Psyr_1139	0.83	+0.8
1,290,777	+				+0.7
1,290,777	+				-0.2
1,290,777	+				-1.8
1,290,777	+				+1.9
1,290,777	+				+1.0
1,290,777	+				+0.9
1,290,777	+				-1.4
1,290,777	+				+0.6
1,290,777	+				+1.6
1,290,777	+				+0.6
1,290,777	+				-1.0
1,290,777	+				+0.2
1,290,777	+				-0.1
1,290,777	+				-0.2
1,290,777	+				-0.5
1,290,777	+				-1.2
1,290,777	+				-0.7
1,290,777	+				-1.0
1,290,777	+				+0.3
1,290,777	+				-0.1
1,290,778	-				+0.0
1,290,778	-				+0.8
1,290,778	-				-0.4
1,290,778	-				-1.0
1,290,778	-				+0.3
1,290,778	-				-0.4
1,290,778	-				+0.3
1,290,778	-				-1.2
1,290,778	-				-1.7
1,290,778	-				+0.7
1,290,778	-				-0.9
1,290,778	-				+0.1
1,290,778	-				-0.8
1,290,778	-				+0.6
1,290,778	-				+0.0
1,290,778	-				+0.1
1,290,778	-				-0.4
1,290,778	-				+0.8
1,290,778	-				-0.7
1,290,778	-				-0.0
1,290,778	-				+0.0
1,290,794	+				-0.5
1,290,794	+				-0.4
1,290,795	-				+0.3
1,290,795	-				+0.2
1,290,795	-				-0.5
1,290,795	-				-2.2
1,290,798	+				+0.0
1,290,798	+				+0.5
1,290,798	+				+0.3
1,290,799	-				-0.2
1,290,799	-				-0.5
1,290,799	-				-1.6
1,290,831	+				+0.5
1,290,832	-				-0.1
1,291,062	+				-0.6
1,291,062	+				+0.1
1,291,062	+				-0.9
1,291,063	-				+0.2
1,291,063	-				+1.3
1,291,105	+				+0.1
1,291,105	+				+0.9
1,291,106	-				-0.2
1,291,106	-				-1.9
1,291,106	-				-0.4
1,291,106	-				+0.9
1,291,107	+				+0.3
1,291,107	+				-0.7
1,291,107	+				-1.2
1,291,107	+				-0.1
1,291,107	+				-0.2
1,291,108	-				-0.7
1,291,108	-				-1.1
1,291,108	-				+1.3
1,291,108	-				-0.7
1,291,109	+				-0.0
1,291,109	+				+0.2
1,291,109	+				-0.0
1,291,109	+				-0.6
1,291,109	+				-0.5
1,291,109	+				-1.2
1,291,109	+				+0.5
1,291,109	+				-0.4
1,291,109	+				-0.4
1,291,109	+				-0.6
1,291,109	+				+1.0
1,291,109	+				+0.3
1,291,109	+				-0.1
1,291,109	+				+0.5
1,291,109	+				+0.3
1,291,109	+				+1.2
1,291,109	+				-1.1
1,291,110	-				-0.5
1,291,110	-				-2.8
1,291,110	-				-0.7
1,291,110	-				+0.9
1,291,110	-				+1.3
1,291,110	-				-0.1
1,291,110	-				-1.0
1,291,110	-				+0.6
1,291,110	-				+0.1
1,291,110	-				-0.8
1,291,110	-				-0.4
1,291,110	-				+1.1
1,291,110	-				+0.6
1,291,111	+				+0.3
1,291,111	+				+0.2
1,291,111	+				+0.3
1,291,111	+				-0.6
1,291,111	+				+1.0
1,291,111	+				+0.2
1,291,111	+				-0.3
1,291,112	-				+1.2
1,291,112	-				-0.3
1,291,112	-				+0.3
1,291,112	-				-0.6
1,291,146	+				-0.7
1,291,146	+				-1.0
1,291,146	+				-0.1
1,291,146	+				-0.1
1,291,146	+				+0.4
1,291,146	+				-1.0
1,291,146	+				-0.9
1,291,146	+				-0.4
1,291,146	+				-1.4
1,291,146	+				+0.4
1,291,146	+				-0.0
1,291,146	+				-0.3
1,291,146	+				+0.2
1,291,146	+				+0.5
1,291,146	+				-0.2
1,291,146	+				-1.0
1,291,146	+				-0.1
1,291,146	+				+0.3
1,291,146	+				-0.1
1,291,146	+				+0.8
1,291,146	+				-1.1
1,291,146	+				-0.3
1,291,146	+				-1.4
1,291,146	+				-1.7
1,291,146	+				-0.4
1,291,146	+				-0.6
1,291,146	+				+0.3
1,291,146	+				-0.4
1,291,146	+				+0.2
1,291,146	+				+0.7
1,291,146	+				-0.6
1,291,146	+				-0.3
1,291,146	+				+0.3
1,291,146	+				+1.3
1,291,146	+				-1.0
1,291,146	+				+1.3
1,291,147	-				+0.3
1,291,147	-				+0.4
1,291,147	-				-1.5
1,291,147	-				-0.2
1,291,147	-				-3.2
1,291,147	-				+0.3
1,291,147	-				-0.4
1,291,147	-				-0.4
1,291,147	-				-0.7
1,291,147	-				+0.3
1,291,147	-				+0.5
1,291,147	-				-0.4
1,291,147	-				-0.7
1,291,147	-				+0.8
1,291,147	-				+0.4
1,291,147	-				-1.5
1,291,147	-				+0.1
1,291,148	+				-0.5
1,291,148	+				-1.1
1,291,148	+				+2.1
1,291,148	+				+0.1
1,291,148	+				-0.3
1,291,148	+				+1.3
1,291,148	+				-0.8
1,291,148	+				-0.7
1,291,148	+				-1.3
1,291,148	+				-0.5
1,291,148	+				-0.3
1,291,148	+				-0.2
1,291,148	+				+0.1
1,291,148	+				-0.7
1,291,148	+				-1.7
1,291,148	+				-0.0
1,291,148	+				-2.6
1,291,148	+				+0.4
1,291,148	+				-0.2
1,291,148	+				+0.2
1,291,148	+				+0.1
1,291,148	+				-0.2
1,291,148	+				+0.7
1,291,148	+				-1.0
1,291,148	+				+0.1
1,291,148	+				+0.9
1,291,148	+				-0.8
1,291,148	+				-0.4
1,291,148	+				-1.1
1,291,149	-				-1.2
1,291,149	-				-0.6
1,291,149	-				+1.5
1,291,149	-				+1.0
1,291,149	-				-1.1
1,291,149	-				-0.1
1,291,149	-				-0.1
1,291,149	-				-0.8
1,291,149	-				-1.5
1,291,149	-				-0.6
1,291,149	-				-0.5
1,291,149	-				-0.4
1,291,149	-				+1.9
1,291,149	-				-0.0
1,291,149	-				-0.6
1,291,149	-				+0.5
1,291,149	-				+1.3
1,291,149	-				-0.8
1,291,149	-				+0.9
1,291,149	-				-0.9
1,291,149	-				-1.0
1,291,149	-				-0.3
1,291,149	-				-0.4
1,291,149	-				-0.7
1,291,149	-				+0.4
1,291,150	+				-0.4
1,291,150	+				+0.6
1,291,150	+				+0.3
1,291,150	+				+0.2
1,291,150	+				-0.2
1,291,150	+				+1.0
1,291,150	+				-0.4
1,291,150	+				-0.2
1,291,150	+				+0.0
1,291,150	+				-1.6
1,291,150	+				+0.5
1,291,150	+				-2.1
1,291,150	+				-0.2
1,291,150	+				+0.7
1,291,150	+				+0.6
1,291,150	+				-0.6
1,291,150	+				+0.3
1,291,150	+				-0.2
1,291,150	+				-0.4
1,291,150	+				-0.0
1,291,150	+				-0.2
1,291,151	-				-1.0
1,291,151	-				+1.2
1,291,151	-				+0.7
1,291,151	-				-0.2
1,291,151	-				-0.9
1,291,151	-				+0.9
1,291,151	-				+0.4
1,291,151	-				-1.2
1,291,151	-				-0.2
1,291,151	-				+0.0
1,291,151	-				-1.1
1,291,151	-				-0.1
1,291,151	-				+0.6
1,291,151	-				+0.2
1,291,152	+				-0.7
1,291,152	+				+0.1
1,291,152	+				-1.1
1,291,152	+				+0.4
1,291,152	+				+1.1
1,291,152	+				-0.3
1,291,152	+				-0.3
1,291,152	+				-0.9
1,291,152	+				+0.8
1,291,152	+				-1.1
1,291,152	+				-0.1
1,291,152	+				-0.0
1,291,152	+				+1.0
1,291,153	-				-0.9
1,291,153	-				-0.9
1,291,153	-				+0.3
1,291,153	-				-1.0
1,291,153	-				+0.1
1,291,153	-				+0.6
1,291,153	-				-0.0
1,291,153	-				-0.0
1,291,153	-				-1.8
1,291,153	-				+0.3
1,291,153	-				-1.2
1,291,153	-				-0.5
1,291,153	-				-1.2
1,291,153	-				-0.2
1,291,243	-				+1.5
1,291,372	+				-0.4
1,291,372	+				-0.3
1,291,377	+				-0.8
1,291,377	+				+1.1
1,291,377	+				-0.6
1,291,377	+				+0.7
1,291,377	+				-0.2
1,291,377	+				+0.9
1,291,377	+				+0.2
1,291,377	+				-0.2
1,291,377	+				+1.2
1,291,377	+				-0.5
1,291,378	-				-1.2
1,291,378	-				-0.8
1,291,378	-				+1.3
1,291,402	+				+1.3
1,291,402	+				-0.4
1,291,402	+				-0.3
1,291,403	-				-0.5
1,291,443	+		Psyr_1140	0.12	-1.8
1,291,444	-		Psyr_1140	0.12	+1.6
1,291,474	+		Psyr_1140	0.18	+1.9
1,291,474	+		Psyr_1140	0.18	-2.0
1,291,475	-		Psyr_1140	0.18	+0.3
1,291,475	-		Psyr_1140	0.18	+0.3
1,291,475	-		Psyr_1140	0.18	+0.3
1,291,475	-		Psyr_1140	0.18	-1.2
1,291,475	-		Psyr_1140	0.18	-0.2
1,291,475	-		Psyr_1140	0.18	-1.5
1,291,475	-		Psyr_1140	0.18	+1.3
1,291,475	-		Psyr_1140	0.18	-1.0
1,291,529	-		Psyr_1140	0.28	-0.7
1,291,734	+		Psyr_1140	0.69	+1.3
1,291,891	+				-0.2
1,291,892	-				+0.1
1,291,945	+				+0.3
1,291,945	+				+0.1
1,291,946	-				-1.4
1,291,979	+				+0.5
1,291,988	+				-2.0
1,292,024	+				-0.2
1,292,029	-				-0.7
1,292,032	+				-0.4
1,292,032	+				+0.3
1,292,032	+				+0.3
1,292,032	+				-0.2
1,292,032	+				-0.7
1,292,032	+				+0.8
1,292,032	+				-0.7
1,292,032	+				-2.4
1,292,032	+				+0.8
1,292,142	+				+1.0
1,292,142	+				-0.2
1,292,217	+				-1.1
1,292,217	+				+1.2
1,292,781	-		Psyr_1141	0.45	+1.3