Experiment: MBOA 1.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_3783 and Psyr_3784 are separated by 77 nucleotides Psyr_3784 and Psyr_3785 are separated by 144 nucleotides Psyr_3785 and Psyr_3786 are separated by 69 nucleotides
Psyr_3783: Psyr_3783 - conserved hypothetical protein, at 4,500,190 to 4,500,570
_3783
Psyr_3784: Psyr_3784 - conserved hypothetical protein, at 4,500,648 to 4,501,049
_3784
Psyr_3785: Psyr_3785 - DSBA oxidoreductase, at 4,501,194 to 4,501,826
_3785
Psyr_3786: Psyr_3786 - RNA binding S1, at 4,501,896 to 4,502,732
_3786
Position (kb)
4501
4502 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4500.336 kb on - strand, within Psyr_3783 at 4500.343 kb on + strand, within Psyr_3783 at 4500.344 kb on - strand, within Psyr_3783 at 4500.344 kb on - strand, within Psyr_3783 at 4500.413 kb on + strand, within Psyr_3783 at 4500.414 kb on - strand, within Psyr_3783 at 4500.569 kb on - strand at 4500.778 kb on + strand, within Psyr_3784 at 4500.778 kb on + strand, within Psyr_3784 at 4500.778 kb on + strand, within Psyr_3784 at 4500.778 kb on + strand, within Psyr_3784 at 4500.778 kb on + strand, within Psyr_3784 at 4500.778 kb on + strand, within Psyr_3784 at 4500.887 kb on - strand, within Psyr_3784 at 4500.887 kb on - strand, within Psyr_3784 at 4500.918 kb on + strand, within Psyr_3784 at 4500.919 kb on - strand, within Psyr_3784 at 4500.958 kb on + strand, within Psyr_3784 at 4500.958 kb on + strand, within Psyr_3784 at 4501.027 kb on + strand at 4501.027 kb on + strand at 4501.028 kb on - strand at 4501.039 kb on - strand at 4501.097 kb on + strand at 4501.098 kb on - strand at 4501.098 kb on - strand at 4501.098 kb on - strand at 4501.113 kb on + strand at 4501.144 kb on + strand at 4501.145 kb on - strand at 4501.145 kb on - strand at 4501.145 kb on - strand at 4501.219 kb on + strand at 4501.219 kb on + strand at 4501.219 kb on + strand at 4501.219 kb on + strand at 4501.219 kb on + strand at 4501.219 kb on + strand at 4501.220 kb on - strand at 4501.220 kb on - strand at 4501.220 kb on - strand at 4501.220 kb on - strand at 4501.220 kb on - strand at 4501.220 kb on - strand at 4501.220 kb on - strand at 4501.236 kb on + strand at 4501.236 kb on + strand at 4501.237 kb on - strand at 4501.237 kb on - strand at 4501.254 kb on + strand at 4501.293 kb on + strand, within Psyr_3785 at 4501.293 kb on + strand, within Psyr_3785 at 4501.294 kb on - strand, within Psyr_3785 at 4501.294 kb on - strand, within Psyr_3785 at 4501.374 kb on + strand, within Psyr_3785 at 4501.374 kb on + strand, within Psyr_3785 at 4501.403 kb on - strand, within Psyr_3785 at 4501.562 kb on + strand, within Psyr_3785 at 4501.563 kb on - strand, within Psyr_3785 at 4501.802 kb on - strand at 4501.945 kb on + strand at 4501.945 kb on + strand at 4501.945 kb on + strand at 4501.945 kb on + strand at 4501.946 kb on - strand at 4501.946 kb on - strand at 4501.946 kb on - strand at 4501.946 kb on - strand at 4502.155 kb on + strand, within Psyr_3786 at 4502.155 kb on + strand, within Psyr_3786 at 4502.156 kb on - strand, within Psyr_3786 at 4502.156 kb on - strand, within Psyr_3786 at 4502.156 kb on - strand, within Psyr_3786 at 4502.299 kb on + strand, within Psyr_3786 at 4502.299 kb on + strand, within Psyr_3786 at 4502.300 kb on - strand, within Psyr_3786 at 4502.300 kb on - strand, within Psyr_3786 at 4502.300 kb on - strand, within Psyr_3786 at 4502.300 kb on - strand, within Psyr_3786 at 4502.300 kb on - strand, within Psyr_3786 at 4502.300 kb on - strand, within Psyr_3786 at 4502.375 kb on - strand, within Psyr_3786 at 4502.392 kb on + strand, within Psyr_3786 at 4502.392 kb on + strand, within Psyr_3786 at 4502.428 kb on + strand, within Psyr_3786 at 4502.469 kb on + strand, within Psyr_3786 at 4502.469 kb on + strand, within Psyr_3786 at 4502.469 kb on + strand, within Psyr_3786 at 4502.470 kb on - strand, within Psyr_3786 at 4502.470 kb on - strand, within Psyr_3786 at 4502.470 kb on - strand, within Psyr_3786 at 4502.470 kb on - strand, within Psyr_3786 at 4502.572 kb on + strand, within Psyr_3786 at 4502.572 kb on + strand, within Psyr_3786 at 4502.572 kb on + strand, within Psyr_3786 at 4502.572 kb on + strand, within Psyr_3786 at 4502.573 kb on - strand, within Psyr_3786 at 4502.573 kb on - strand, within Psyr_3786 at 4502.626 kb on + strand, within Psyr_3786 at 4502.627 kb on - strand, within Psyr_3786 at 4502.671 kb on + strand at 4502.671 kb on + strand at 4502.714 kb on - strand at 4502.714 kb on - strand at 4502.714 kb on - strand at 4502.749 kb on + strand at 4502.749 kb on + strand at 4502.766 kb on - strand at 4502.813 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MBOA 1.2 mM remove 4,500,336 - Psyr_3783 0.38 +0.7 4,500,343 + Psyr_3783 0.40 +0.2 4,500,344 - Psyr_3783 0.40 -1.0 4,500,344 - Psyr_3783 0.40 +0.4 4,500,413 + Psyr_3783 0.59 +0.9 4,500,414 - Psyr_3783 0.59 -0.7 4,500,569 - +0.0 4,500,778 + Psyr_3784 0.32 -0.5 4,500,778 + Psyr_3784 0.32 +0.4 4,500,778 + Psyr_3784 0.32 +0.1 4,500,778 + Psyr_3784 0.32 -0.3 4,500,778 + Psyr_3784 0.32 +0.9 4,500,778 + Psyr_3784 0.32 -1.4 4,500,887 - Psyr_3784 0.59 -1.6 4,500,887 - Psyr_3784 0.59 +0.8 4,500,918 + Psyr_3784 0.67 -0.7 4,500,919 - Psyr_3784 0.67 -0.2 4,500,958 + Psyr_3784 0.77 +0.2 4,500,958 + Psyr_3784 0.77 -0.2 4,501,027 + -0.1 4,501,027 + -0.6 4,501,028 - +0.2 4,501,039 - +0.3 4,501,097 + -0.0 4,501,098 - -0.7 4,501,098 - -0.1 4,501,098 - +1.1 4,501,113 + -0.5 4,501,144 + -0.2 4,501,145 - -0.8 4,501,145 - -0.4 4,501,145 - -0.5 4,501,219 + +1.4 4,501,219 + -3.1 4,501,219 + +0.5 4,501,219 + +0.1 4,501,219 + +0.4 4,501,219 + +0.2 4,501,220 - -1.2 4,501,220 - -0.1 4,501,220 - -1.3 4,501,220 - +0.2 4,501,220 - -0.0 4,501,220 - +0.6 4,501,220 - +0.7 4,501,236 + -0.5 4,501,236 + +1.0 4,501,237 - +0.3 4,501,237 - +0.5 4,501,254 + +1.4 4,501,293 + Psyr_3785 0.16 -0.1 4,501,293 + Psyr_3785 0.16 -0.6 4,501,294 - Psyr_3785 0.16 -1.4 4,501,294 - Psyr_3785 0.16 -0.5 4,501,374 + Psyr_3785 0.28 -0.4 4,501,374 + Psyr_3785 0.28 -0.2 4,501,403 - Psyr_3785 0.33 -0.4 4,501,562 + Psyr_3785 0.58 -0.4 4,501,563 - Psyr_3785 0.58 -0.2 4,501,802 - -0.4 4,501,945 + +0.1 4,501,945 + -0.5 4,501,945 + +0.1 4,501,945 + +2.4 4,501,946 - -0.5 4,501,946 - -0.9 4,501,946 - -0.3 4,501,946 - -0.4 4,502,155 + Psyr_3786 0.31 -0.0 4,502,155 + Psyr_3786 0.31 +0.3 4,502,156 - Psyr_3786 0.31 +0.3 4,502,156 - Psyr_3786 0.31 +0.0 4,502,156 - Psyr_3786 0.31 -0.4 4,502,299 + Psyr_3786 0.48 -0.4 4,502,299 + Psyr_3786 0.48 +0.2 4,502,300 - Psyr_3786 0.48 +0.1 4,502,300 - Psyr_3786 0.48 -1.5 4,502,300 - Psyr_3786 0.48 +0.3 4,502,300 - Psyr_3786 0.48 -0.4 4,502,300 - Psyr_3786 0.48 +0.7 4,502,300 - Psyr_3786 0.48 +0.5 4,502,375 - Psyr_3786 0.57 -0.3 4,502,392 + Psyr_3786 0.59 +1.3 4,502,392 + Psyr_3786 0.59 +1.6 4,502,428 + Psyr_3786 0.64 -1.9 4,502,469 + Psyr_3786 0.68 +0.3 4,502,469 + Psyr_3786 0.68 -0.2 4,502,469 + Psyr_3786 0.68 -1.0 4,502,470 - Psyr_3786 0.69 -0.6 4,502,470 - Psyr_3786 0.69 -0.5 4,502,470 - Psyr_3786 0.69 +0.4 4,502,470 - Psyr_3786 0.69 +0.1 4,502,572 + Psyr_3786 0.81 +0.9 4,502,572 + Psyr_3786 0.81 +0.7 4,502,572 + Psyr_3786 0.81 -0.2 4,502,572 + Psyr_3786 0.81 -1.0 4,502,573 - Psyr_3786 0.81 +0.1 4,502,573 - Psyr_3786 0.81 -1.6 4,502,626 + Psyr_3786 0.87 -0.4 4,502,627 - Psyr_3786 0.87 -0.4 4,502,671 + +1.5 4,502,671 + +1.2 4,502,714 - -0.1 4,502,714 - +1.4 4,502,714 - +1.5 4,502,749 + +0.2 4,502,749 + +0.5 4,502,766 - -0.4 4,502,813 - -0.2
Or see this region's nucleotide sequence