Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3383

Experiment: MBOA 1.2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MBOA 1.2 mM
4,041,984	+				-0.1
4,041,985	-				+0.2
4,042,052	+				+0.2
4,042,053	-				+0.2
4,042,058	+				+0.9
4,042,059	-				-0.2
4,042,073	+				+0.6
4,042,073	+				+0.0
4,042,139	+		Psyr_3382	0.15	+0.2
4,042,139	+		Psyr_3382	0.15	+2.0
4,042,140	-		Psyr_3382	0.15	-0.1
4,042,160	+		Psyr_3382	0.17	-0.4
4,042,161	-		Psyr_3382	0.17	+0.4
4,042,161	-		Psyr_3382	0.17	+0.5
4,042,161	-		Psyr_3382	0.17	+0.3
4,042,230	+		Psyr_3382	0.26	-0.3
4,042,230	+		Psyr_3382	0.26	-0.8
4,042,230	+		Psyr_3382	0.26	+1.2
4,042,230	+		Psyr_3382	0.26	-0.1
4,042,231	-		Psyr_3382	0.26	-3.0
4,042,231	-		Psyr_3382	0.26	-0.5
4,042,231	-		Psyr_3382	0.26	-0.3
4,042,231	-		Psyr_3382	0.26	+0.7
4,042,231	-		Psyr_3382	0.26	+1.6
4,042,231	-		Psyr_3382	0.26	-1.1
4,042,231	-		Psyr_3382	0.26	-0.2
4,042,246	-		Psyr_3382	0.27	-0.3
4,042,269	+		Psyr_3382	0.30	-0.8
4,042,269	+		Psyr_3382	0.30	-2.4
4,042,333	-		Psyr_3382	0.38	-0.0
4,042,333	-		Psyr_3382	0.38	-2.1
4,042,333	-		Psyr_3382	0.38	+0.7
4,042,333	-		Psyr_3382	0.38	+0.0
4,042,333	-		Psyr_3382	0.38	+0.8
4,042,333	-		Psyr_3382	0.38	+0.8
4,042,335	+		Psyr_3382	0.38	+0.5
4,042,336	-		Psyr_3382	0.38	+0.3
4,042,351	-		Psyr_3382	0.40	-0.4
4,042,376	+		Psyr_3382	0.43	+0.2
4,042,376	+		Psyr_3382	0.43	+0.5
4,042,414	-		Psyr_3382	0.48	-0.1
4,042,414	-		Psyr_3382	0.48	+0.2
4,042,414	-		Psyr_3382	0.48	-0.2
4,042,431	+		Psyr_3382	0.50	-1.9
4,042,431	+		Psyr_3382	0.50	+0.7
4,042,431	+		Psyr_3382	0.50	+0.2
4,042,431	+		Psyr_3382	0.50	-0.6
4,042,431	+		Psyr_3382	0.50	+2.4
4,042,432	-		Psyr_3382	0.50	+0.2
4,042,432	-		Psyr_3382	0.50	-0.4
4,042,524	+		Psyr_3382	0.61	-0.3
4,042,524	+		Psyr_3382	0.61	+0.5
4,042,524	+		Psyr_3382	0.61	-1.6
4,042,524	+		Psyr_3382	0.61	-0.1
4,042,524	+		Psyr_3382	0.61	-1.0
4,042,524	+		Psyr_3382	0.61	-0.0
4,042,524	+		Psyr_3382	0.61	+0.1
4,042,524	+		Psyr_3382	0.61	+1.4
4,042,524	+		Psyr_3382	0.61	-0.0
4,042,524	+		Psyr_3382	0.61	-0.9
4,042,524	+		Psyr_3382	0.61	+0.6
4,042,524	+		Psyr_3382	0.61	+0.2
4,042,524	+		Psyr_3382	0.61	-0.3
4,042,524	+		Psyr_3382	0.61	+0.6
4,042,524	+		Psyr_3382	0.61	-0.5
4,042,524	+		Psyr_3382	0.61	+0.9
4,042,524	+		Psyr_3382	0.61	-0.2
4,042,524	+		Psyr_3382	0.61	+0.4
4,042,525	-		Psyr_3382	0.61	-0.5
4,042,525	-		Psyr_3382	0.61	-2.1
4,042,525	-		Psyr_3382	0.61	-0.2
4,042,525	-		Psyr_3382	0.61	+0.2
4,042,525	-		Psyr_3382	0.61	+2.8
4,042,525	-		Psyr_3382	0.61	+1.2
4,042,525	-		Psyr_3382	0.61	-0.2
4,042,525	-		Psyr_3382	0.61	-1.4
4,042,525	-		Psyr_3382	0.61	+0.1
4,042,525	-		Psyr_3382	0.61	-0.2
4,042,575	+		Psyr_3382	0.67	+0.6
4,042,575	+		Psyr_3382	0.67	-0.2
4,042,618	+		Psyr_3382	0.72	+0.4
4,042,618	+		Psyr_3382	0.72	+1.2
4,042,619	-		Psyr_3382	0.72	-0.3
4,042,619	-		Psyr_3382	0.72	+0.3
4,042,619	-		Psyr_3382	0.72	-0.5
4,042,619	-		Psyr_3382	0.72	-0.1
4,042,619	-		Psyr_3382	0.72	-0.0
4,042,959	+				-1.1
4,043,044	+		Psyr_3383	0.11	+0.1
4,043,045	-		Psyr_3383	0.12	+0.5
4,043,065	+		Psyr_3383	0.13	-0.5
4,043,065	+		Psyr_3383	0.13	-1.2
4,043,066	-		Psyr_3383	0.14	+0.1
4,043,074	+		Psyr_3383	0.14	+0.6
4,043,075	-		Psyr_3383	0.14	-0.3
4,043,428	+		Psyr_3383	0.49	-1.4
4,043,429	-		Psyr_3383	0.49	-0.8
4,043,550	+		Psyr_3383	0.61	+0.2
4,043,550	+		Psyr_3383	0.61	-0.8
4,043,551	-		Psyr_3383	0.61	-0.4
4,043,551	-		Psyr_3383	0.61	+0.8
4,043,740	+		Psyr_3383	0.79	-0.6
4,043,740	+		Psyr_3383	0.79	-1.7
4,043,740	+		Psyr_3383	0.79	-0.7
4,043,749	+		Psyr_3383	0.80	-0.0
4,043,750	-		Psyr_3383	0.80	-0.1
4,043,750	-		Psyr_3383	0.80	-1.5
4,043,750	-		Psyr_3383	0.80	-1.9
4,043,827	+		Psyr_3383	0.88	-1.3
4,043,827	+		Psyr_3383	0.88	-1.6
4,043,828	-		Psyr_3383	0.88	-0.8
4,043,828	-		Psyr_3383	0.88	+0.1
4,043,828	-		Psyr_3383	0.88	-1.0
4,043,828	-		Psyr_3383	0.88	-0.3
4,043,828	-		Psyr_3383	0.88	+0.4
4,043,828	-		Psyr_3383	0.88	+0.5
4,043,828	-		Psyr_3383	0.88	-0.5
4,043,828	-		Psyr_3383	0.88	-2.0
4,043,828	-		Psyr_3383	0.88	-0.6
4,043,829	+		Psyr_3383	0.88	-2.0
4,043,829	+		Psyr_3383	0.88	+1.4
4,043,938	+				-0.6
4,043,938	+				-0.5
4,043,950	+				-0.6
4,043,951	-				+0.6
4,043,951	-				-0.3
4,043,951	-				+0.1
4,043,999	-				+1.8
4,044,017	+				+0.3
4,044,018	-				+0.4
4,044,118	+		Psyr_3384	0.26	+0.9
4,044,119	-		Psyr_3384	0.26	-0.4
4,044,121	+		Psyr_3384	0.27	-0.3
4,044,121	+		Psyr_3384	0.27	+0.1
4,044,121	+		Psyr_3384	0.27	-2.3
4,044,121	+		Psyr_3384	0.27	-0.4
4,044,121	+		Psyr_3384	0.27	-1.0
4,044,121	+		Psyr_3384	0.27	-0.3
4,044,121	+		Psyr_3384	0.27	+0.1
4,044,122	-		Psyr_3384	0.27	-0.1
4,044,122	-		Psyr_3384	0.27	-0.0
4,044,122	-		Psyr_3384	0.27	+0.2
4,044,122	-		Psyr_3384	0.27	+0.9
4,044,136	+		Psyr_3384	0.30	-0.1
4,044,137	-		Psyr_3384	0.31	-0.3
4,044,166	+		Psyr_3384	0.38	+0.3
4,044,167	-		Psyr_3384	0.38	+0.3
4,044,167	-		Psyr_3384	0.38	-0.4
4,044,275	+		Psyr_3384	0.64	-0.2
4,044,276	-		Psyr_3384	0.65	+2.3
4,044,336	-		Psyr_3384	0.79	-0.1
4,044,336	-		Psyr_3384	0.79	+0.2
4,044,415	+				+0.0
4,044,419	+				+0.7
4,044,419	+				+0.1
4,044,419	+				-0.7
4,044,419	+				+0.7
4,044,419	+				+0.3
4,044,420	-				-0.0
4,044,420	-				-0.1
4,044,420	-				-0.0
4,044,432	+				+0.4
4,044,433	-				+0.9
4,044,433	-				-0.3
4,044,476	-				+0.4
4,044,476	-				-1.4
4,044,719	+		Psyr_3385	0.24	-0.8
4,044,775	+		Psyr_3385	0.29	-1.6