Experiment: MBOA 1.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0284 and Psyr_0285 are separated by 69 nucleotides Psyr_0285 and Psyr_0286 are separated by 247 nucleotides Psyr_0286 and Psyr_0287 are separated by 120 nucleotides
Psyr_0284: Psyr_0284 - Electron transport protein SCO1/SenC, at 302,686 to 303,318
_0284
Psyr_0285: Psyr_0285 - Cytochrome c oxidase assembly protein CtaG/Cox11, at 303,388 to 303,879
_0285
Psyr_0286: Psyr_0286 - conserved hypothetical protein, at 304,127 to 304,777
_0286
Psyr_0287: Psyr_0287 - Sulphate transporter, at 304,898 to 306,430
_0287
Position (kb) 304
305 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 303.333 kb on + strand at 303.365 kb on + strand at 303.365 kb on + strand at 303.365 kb on + strand at 303.365 kb on + strand at 303.365 kb on + strand at 303.365 kb on + strand at 303.365 kb on + strand at 303.365 kb on + strand at 303.365 kb on + strand at 303.365 kb on + strand at 303.365 kb on + strand at 303.365 kb on + strand at 303.365 kb on + strand at 303.365 kb on + strand at 303.365 kb on + strand at 303.366 kb on - strand at 303.366 kb on - strand at 303.366 kb on - strand at 303.366 kb on - strand at 303.366 kb on - strand at 303.366 kb on - strand at 303.366 kb on - strand at 303.366 kb on - strand at 303.366 kb on - strand at 303.367 kb on + strand at 303.367 kb on + strand at 303.367 kb on + strand at 303.367 kb on + strand at 303.368 kb on - strand at 303.368 kb on - strand at 303.368 kb on - strand at 303.383 kb on + strand at 303.384 kb on - strand at 303.384 kb on - strand at 303.389 kb on + strand at 303.414 kb on + strand at 303.414 kb on + strand at 303.414 kb on + strand at 303.415 kb on - strand at 303.415 kb on - strand at 303.415 kb on - strand at 303.416 kb on + strand at 303.416 kb on + strand at 303.416 kb on + strand at 303.416 kb on + strand at 303.416 kb on + strand at 303.417 kb on - strand at 303.417 kb on - strand at 303.436 kb on + strand at 303.436 kb on + strand at 303.436 kb on + strand at 303.436 kb on + strand at 303.437 kb on - strand at 303.437 kb on - strand at 303.437 kb on - strand at 303.571 kb on - strand, within Psyr_0285 at 303.785 kb on + strand, within Psyr_0285 at 303.786 kb on - strand, within Psyr_0285 at 303.811 kb on + strand, within Psyr_0285 at 303.811 kb on + strand, within Psyr_0285 at 303.811 kb on + strand, within Psyr_0285 at 303.812 kb on - strand, within Psyr_0285 at 303.812 kb on - strand, within Psyr_0285 at 303.826 kb on + strand, within Psyr_0285 at 303.826 kb on + strand, within Psyr_0285 at 303.826 kb on + strand, within Psyr_0285 at 303.826 kb on + strand, within Psyr_0285 at 303.827 kb on - strand, within Psyr_0285 at 303.827 kb on - strand, within Psyr_0285 at 303.827 kb on - strand, within Psyr_0285 at 303.829 kb on + strand, within Psyr_0285 at 303.829 kb on + strand, within Psyr_0285 at 303.829 kb on + strand, within Psyr_0285 at 303.829 kb on + strand, within Psyr_0285 at 303.830 kb on - strand at 303.830 kb on - strand at 303.830 kb on - strand at 303.830 kb on - strand at 303.830 kb on - strand at 303.897 kb on - strand at 303.897 kb on - strand at 303.948 kb on + strand at 303.949 kb on - strand at 304.001 kb on + strand at 304.011 kb on - strand at 304.030 kb on - strand at 304.032 kb on - strand at 304.032 kb on - strand at 304.053 kb on + strand at 304.057 kb on + strand at 304.058 kb on - strand at 304.066 kb on + strand at 304.067 kb on - strand at 304.067 kb on - strand at 304.071 kb on + strand at 304.071 kb on + strand at 304.071 kb on + strand at 304.072 kb on - strand at 304.155 kb on + strand at 304.155 kb on + strand at 304.155 kb on + strand at 304.155 kb on + strand at 304.155 kb on + strand at 304.156 kb on - strand at 304.156 kb on - strand at 304.156 kb on - strand at 304.156 kb on - strand at 304.156 kb on - strand at 304.156 kb on - strand at 304.161 kb on + strand at 304.161 kb on + strand at 304.161 kb on + strand at 304.161 kb on + strand at 304.161 kb on + strand at 304.161 kb on + strand at 304.161 kb on + strand at 304.162 kb on - strand at 304.162 kb on - strand at 304.162 kb on - strand at 304.162 kb on - strand at 304.162 kb on - strand at 304.292 kb on + strand, within Psyr_0286 at 304.292 kb on + strand, within Psyr_0286 at 304.293 kb on - strand, within Psyr_0286 at 304.293 kb on - strand, within Psyr_0286 at 304.365 kb on + strand, within Psyr_0286 at 304.366 kb on - strand, within Psyr_0286 at 304.460 kb on + strand, within Psyr_0286 at 304.460 kb on + strand, within Psyr_0286 at 304.461 kb on - strand, within Psyr_0286 at 304.461 kb on - strand, within Psyr_0286 at 304.499 kb on + strand, within Psyr_0286 at 304.499 kb on + strand, within Psyr_0286 at 304.499 kb on + strand, within Psyr_0286 at 304.499 kb on + strand, within Psyr_0286 at 304.499 kb on + strand, within Psyr_0286 at 304.499 kb on + strand, within Psyr_0286 at 304.500 kb on - strand, within Psyr_0286 at 304.500 kb on - strand, within Psyr_0286 at 304.500 kb on - strand, within Psyr_0286 at 304.538 kb on - strand, within Psyr_0286 at 304.538 kb on - strand, within Psyr_0286 at 304.932 kb on + strand at 304.932 kb on + strand at 304.932 kb on + strand at 304.932 kb on + strand at 304.932 kb on + strand at 304.933 kb on - strand at 304.933 kb on - strand at 305.050 kb on - strand at 305.050 kb on - strand at 305.095 kb on + strand, within Psyr_0287 at 305.255 kb on + strand, within Psyr_0287 at 305.255 kb on + strand, within Psyr_0287 at 305.256 kb on - strand, within Psyr_0287 at 305.256 kb on - strand, within Psyr_0287 at 305.304 kb on + strand, within Psyr_0287 at 305.305 kb on - strand, within Psyr_0287 at 305.305 kb on - strand, within Psyr_0287 at 305.305 kb on - strand, within Psyr_0287 at 305.305 kb on - strand, within Psyr_0287 at 305.305 kb on - strand, within Psyr_0287 at 305.379 kb on + strand, within Psyr_0287 at 305.379 kb on + strand, within Psyr_0287 at 305.379 kb on + strand, within Psyr_0287 at 305.380 kb on - strand, within Psyr_0287 at 305.380 kb on - strand, within Psyr_0287 at 305.442 kb on - strand, within Psyr_0287 at 305.442 kb on - strand, within Psyr_0287 at 305.491 kb on + strand, within Psyr_0287 at 305.568 kb on + strand, within Psyr_0287 at 305.570 kb on - strand, within Psyr_0287 at 305.570 kb on - strand, within Psyr_0287 at 305.570 kb on - strand, within Psyr_0287 at 305.570 kb on - strand, within Psyr_0287 at 305.682 kb on - strand, within Psyr_0287
Per-strain Table
Position Strand Gene LocusTag Fraction MBOA 1.2 mM remove 303,333 + -1.5 303,365 + -0.1 303,365 + -1.0 303,365 + +0.2 303,365 + -0.3 303,365 + +1.4 303,365 + -0.3 303,365 + -0.3 303,365 + -1.7 303,365 + -2.0 303,365 + -0.1 303,365 + -0.3 303,365 + -0.7 303,365 + -0.5 303,365 + -0.0 303,365 + +0.1 303,366 - -2.8 303,366 - +0.2 303,366 - +0.4 303,366 - -0.9 303,366 - +0.9 303,366 - -0.1 303,366 - +0.4 303,366 - -0.5 303,366 - +0.9 303,367 + -0.6 303,367 + -0.9 303,367 + +0.3 303,367 + +2.0 303,368 - +0.9 303,368 - -1.4 303,368 - -0.0 303,383 + +0.9 303,384 - -0.9 303,384 - +0.9 303,389 + +0.3 303,414 + -2.0 303,414 + -0.4 303,414 + +0.1 303,415 - -0.1 303,415 - -0.1 303,415 - -0.4 303,416 + +0.0 303,416 + -0.5 303,416 + -0.4 303,416 + -1.1 303,416 + -0.1 303,417 - -0.7 303,417 - -1.0 303,436 + -0.8 303,436 + +0.2 303,436 + +1.0 303,436 + +0.2 303,437 - -0.7 303,437 - +0.1 303,437 - +0.1 303,571 - Psyr_0285 0.37 +0.2 303,785 + Psyr_0285 0.81 -0.7 303,786 - Psyr_0285 0.81 +1.9 303,811 + Psyr_0285 0.86 -0.5 303,811 + Psyr_0285 0.86 -0.1 303,811 + Psyr_0285 0.86 +0.5 303,812 - Psyr_0285 0.86 +0.9 303,812 - Psyr_0285 0.86 +0.2 303,826 + Psyr_0285 0.89 -0.4 303,826 + Psyr_0285 0.89 -1.1 303,826 + Psyr_0285 0.89 -0.1 303,826 + Psyr_0285 0.89 -0.0 303,827 - Psyr_0285 0.89 +0.4 303,827 - Psyr_0285 0.89 +1.4 303,827 - Psyr_0285 0.89 +0.3 303,829 + Psyr_0285 0.90 +0.4 303,829 + Psyr_0285 0.90 -0.3 303,829 + Psyr_0285 0.90 -0.3 303,829 + Psyr_0285 0.90 -1.0 303,830 - -0.8 303,830 - +1.8 303,830 - +1.3 303,830 - -0.3 303,830 - +0.2 303,897 - +0.6 303,897 - +0.9 303,948 + -1.6 303,949 - -0.8 304,001 + -1.1 304,011 - +0.2 304,030 - -0.9 304,032 - -0.0 304,032 - -0.6 304,053 + +0.1 304,057 + -1.1 304,058 - +0.9 304,066 + -0.5 304,067 - +0.4 304,067 - +0.8 304,071 + -0.1 304,071 + -1.1 304,071 + -1.0 304,072 - +0.6 304,155 + +1.0 304,155 + -0.7 304,155 + -1.0 304,155 + +0.7 304,155 + +1.2 304,156 - -0.9 304,156 - +0.4 304,156 - +0.8 304,156 - -0.4 304,156 - +0.4 304,156 - +1.4 304,161 + +0.2 304,161 + +0.8 304,161 + -0.9 304,161 + +1.3 304,161 + +0.6 304,161 + -1.1 304,161 + -0.5 304,162 - +0.1 304,162 - -2.3 304,162 - -0.3 304,162 - +0.8 304,162 - -1.0 304,292 + Psyr_0286 0.25 +1.8 304,292 + Psyr_0286 0.25 +0.2 304,293 - Psyr_0286 0.25 +0.7 304,293 - Psyr_0286 0.25 +0.5 304,365 + Psyr_0286 0.37 -0.2 304,366 - Psyr_0286 0.37 +0.7 304,460 + Psyr_0286 0.51 +1.6 304,460 + Psyr_0286 0.51 +0.6 304,461 - Psyr_0286 0.51 +3.0 304,461 - Psyr_0286 0.51 -1.1 304,499 + Psyr_0286 0.57 +0.9 304,499 + Psyr_0286 0.57 +0.8 304,499 + Psyr_0286 0.57 +2.3 304,499 + Psyr_0286 0.57 -0.7 304,499 + Psyr_0286 0.57 -0.4 304,499 + Psyr_0286 0.57 -1.1 304,500 - Psyr_0286 0.57 -0.1 304,500 - Psyr_0286 0.57 +1.3 304,500 - Psyr_0286 0.57 -0.3 304,538 - Psyr_0286 0.63 +0.1 304,538 - Psyr_0286 0.63 -1.3 304,932 + -0.4 304,932 + +0.1 304,932 + -0.9 304,932 + -0.3 304,932 + +0.9 304,933 - -0.3 304,933 - -0.3 305,050 - -0.1 305,050 - -0.8 305,095 + Psyr_0287 0.13 +0.3 305,255 + Psyr_0287 0.23 -2.6 305,255 + Psyr_0287 0.23 -0.2 305,256 - Psyr_0287 0.23 +0.5 305,256 - Psyr_0287 0.23 +1.3 305,304 + Psyr_0287 0.26 -0.1 305,305 - Psyr_0287 0.27 +0.6 305,305 - Psyr_0287 0.27 -0.4 305,305 - Psyr_0287 0.27 -0.3 305,305 - Psyr_0287 0.27 -0.8 305,305 - Psyr_0287 0.27 +0.5 305,379 + Psyr_0287 0.31 +4.6 305,379 + Psyr_0287 0.31 -0.9 305,379 + Psyr_0287 0.31 +0.2 305,380 - Psyr_0287 0.31 -0.7 305,380 - Psyr_0287 0.31 -0.3 305,442 - Psyr_0287 0.35 +0.4 305,442 - Psyr_0287 0.35 -1.7 305,491 + Psyr_0287 0.39 +0.1 305,568 + Psyr_0287 0.44 +0.2 305,570 - Psyr_0287 0.44 -1.5 305,570 - Psyr_0287 0.44 -0.2 305,570 - Psyr_0287 0.44 +0.5 305,570 - Psyr_0287 0.44 +0.4 305,682 - Psyr_0287 0.51 -0.3
Or see this region's nucleotide sequence