Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_5089

Experiment: MBOA 1.2 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	MBOA 1.2 mM
6,037,228	+				-1.9
6,037,229	-				+0.6
6,037,229	-				-0.1
6,037,296	+				-1.4
6,037,296	+				+1.3
6,037,297	-				+0.1
6,037,297	-				-0.5
6,037,297	-				-0.9
6,037,311	+				-1.1
6,037,311	+				+0.1
6,037,311	+				+0.3
6,037,311	+				-0.9
6,037,311	+				-0.8
6,037,311	+				-0.2
6,037,311	+				-0.4
6,037,311	+				-0.6
6,037,311	+				-0.5
6,037,311	+				-0.8
6,037,311	+				-0.8
6,037,311	+				-1.3
6,037,311	+				+0.9
6,037,311	+				+0.5
6,037,311	+				+1.4
6,037,311	+				-1.5
6,037,311	+				-1.8
6,037,311	+				-1.5
6,037,311	+				-0.1
6,037,311	+				-1.0
6,037,312	-				+0.0
6,037,312	-				-1.2
6,037,312	-				-0.6
6,037,312	-				-0.3
6,037,312	-				-1.5
6,037,312	-				-0.3
6,037,312	-				-0.1
6,037,312	-				+0.9
6,037,312	-				-0.1
6,037,312	-				+0.0
6,037,312	-				-0.1
6,037,312	-				+0.2
6,037,312	-				+1.1
6,037,312	-				-0.5
6,037,312	-				-1.5
6,037,312	-				-0.4
6,037,312	-				+0.2
6,037,312	-				+0.4
6,037,312	-				+0.2
6,037,312	-				-0.5
6,037,315	+				-1.5
6,037,315	+				-0.3
6,037,315	+				-2.5
6,037,315	+				-0.7
6,037,315	+				-0.5
6,037,315	+				+0.9
6,037,315	+				+0.1
6,037,315	+				-0.1
6,037,315	+				-1.5
6,037,315	+				+1.3
6,037,315	+				-2.4
6,037,315	+				-0.4
6,037,315	+				+0.3
6,037,316	-				-0.8
6,037,316	-				+0.4
6,037,316	-				+0.4
6,037,316	-				+0.7
6,037,316	-				-0.1
6,037,316	-				-0.3
6,037,316	-				+1.0
6,037,316	-				-0.3
6,037,335	+				+0.4
6,037,335	+				+1.3
6,037,336	-				-0.4
6,037,420	+				-1.1
6,037,420	+				-0.2
6,037,420	+				+0.5
6,037,420	+				-2.1
6,037,420	+				-0.6
6,037,420	+				-1.4
6,037,420	+				-1.2
6,037,420	+				+0.6
6,037,420	+				-0.5
6,037,420	+				+0.1
6,037,420	+				-0.8
6,037,420	+				-1.0
6,037,420	+				-0.1
6,037,420	+				-0.8
6,037,421	-				-0.2
6,037,421	-				+0.5
6,037,421	-				-0.1
6,037,421	-				+4.4
6,037,421	-				+0.5
6,037,421	-				-0.7
6,037,421	-				+1.3
6,037,421	-				+0.1
6,037,421	-				+0.8
6,037,421	-				-2.1
6,037,421	-				-0.3
6,037,421	-				+0.3
6,037,421	-				-0.6
6,037,421	-				-0.5
6,037,421	-				+0.0
6,037,421	-				-0.2
6,037,421	-				+0.4
6,037,847	+		Psyr_5088	0.64	-1.5
6,037,847	+		Psyr_5088	0.64	-3.3
6,037,847	+		Psyr_5088	0.64	-3.1
6,037,847	+		Psyr_5088	0.64	-5.6
6,037,847	+		Psyr_5088	0.64	-4.8
6,037,847	+		Psyr_5088	0.64	-1.7
6,037,847	+		Psyr_5088	0.64	-5.2
6,037,847	+		Psyr_5088	0.64	-4.2
6,037,847	+		Psyr_5088	0.64	-2.1
6,037,847	+		Psyr_5088	0.64	-2.1
6,037,847	+		Psyr_5088	0.64	-2.3
6,037,847	+		Psyr_5088	0.64	-3.5
6,037,848	-		Psyr_5088	0.64	-3.0
6,037,848	-		Psyr_5088	0.64	-1.5
6,037,848	-		Psyr_5088	0.64	-3.8
6,037,848	-		Psyr_5088	0.64	-3.3
6,038,032	+				-2.6
6,038,032	+				-3.5
6,038,032	+				-3.1
6,038,032	+				-3.8
6,038,032	+				-3.7
6,038,032	+				-1.3
6,038,032	+				-2.9
6,038,032	+				-3.9
6,038,032	+				-2.1
6,038,033	-				-1.3
6,038,033	-				-2.6
6,038,033	-				-3.6
6,038,033	-				-3.0
6,038,033	-				-3.4
6,038,033	-				-4.0
6,038,033	-				-4.7
6,038,033	-				-3.0
6,038,033	-				+0.3
6,038,033	-				-2.8
6,038,033	-				-2.3
6,038,033	-				-1.9
6,038,098	+				-1.1
6,038,119	+				-5.0
6,038,119	+				-2.8
6,038,119	+				-1.3
6,038,120	-				-2.4
6,038,120	-				-2.9
6,038,120	-				-2.6
6,038,226	+		Psyr_5089	0.14	-1.8
6,038,227	-		Psyr_5089	0.14	-2.6
6,038,227	-		Psyr_5089	0.14	-2.1
6,038,483	+		Psyr_5089	0.38	-3.0
6,038,483	+		Psyr_5089	0.38	-2.6
6,038,483	+		Psyr_5089	0.38	-2.8
6,038,483	+		Psyr_5089	0.38	-2.6
6,038,483	+		Psyr_5089	0.38	-3.6
6,038,484	-		Psyr_5089	0.38	-4.9
6,038,484	-		Psyr_5089	0.38	-2.5
6,038,484	-		Psyr_5089	0.38	-2.9
6,038,926	-		Psyr_5089	0.79	-2.3
6,038,926	-		Psyr_5089	0.79	-3.4
6,039,182	+				-2.5
6,039,182	+				-3.6
6,039,182	+				-3.0
6,039,182	+				-2.8
6,039,182	+				-1.1
6,039,183	-				-1.3
6,039,183	-				-2.1
6,039,183	-				+0.2
6,039,189	+				-1.7
6,039,189	+				-2.6
6,039,189	+				-0.7
6,039,189	+				-3.4
6,039,189	+				-3.4
6,039,189	+				-2.1
6,039,190	-				+0.9
6,039,190	-				-1.8
6,039,241	-				-1.5
6,039,466	-		Psyr_5090	0.21	-1.5
6,039,524	+		Psyr_5090	0.25	-3.6
6,039,524	+		Psyr_5090	0.25	-1.1
6,039,524	+		Psyr_5090	0.25	-4.0
6,039,524	+		Psyr_5090	0.25	-2.2
6,039,524	+		Psyr_5090	0.25	-3.3
6,039,524	+		Psyr_5090	0.25	-3.9
6,039,524	+		Psyr_5090	0.25	-1.5
6,039,525	-		Psyr_5090	0.25	-3.2
6,039,525	-		Psyr_5090	0.25	-3.6
6,039,525	-		Psyr_5090	0.25	-2.1
6,039,567	+		Psyr_5090	0.28	-3.0
6,039,567	+		Psyr_5090	0.28	-2.1
6,039,567	+		Psyr_5090	0.28	-3.0
6,039,567	+		Psyr_5090	0.28	-3.1
6,039,567	+		Psyr_5090	0.28	-0.9
6,039,568	-		Psyr_5090	0.28	+0.3
6,039,568	-				-1.3
6,039,610	+		Psyr_5090	0.32	-3.0
6,039,610	+		Psyr_5090	0.32	-4.5
6,039,611	-		Psyr_5090	0.32	-2.1
6,039,613	-		Psyr_5090	0.32	-1.9
6,039,751	-		Psyr_5090	0.43	+0.3
6,039,751	-		Psyr_5090	0.43	-3.1
6,039,751	-		Psyr_5090	0.43	-2.5
6,039,793	+		Psyr_5090	0.46	-3.7
6,039,793	+		Psyr_5090	0.46	-3.0