Experiment: MBOA 1.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4694 and Psyr_4695 overlap by 1 nucleotides Psyr_4695 and Psyr_4696 overlap by 17 nucleotides Psyr_4696 and Psyr_4697 are separated by 192 nucleotides
Psyr_4694: Psyr_4694 - Binding-protein-dependent transport systems inner membrane component, at 5,562,573 to 5,563,442
_4694
Psyr_4695: Psyr_4695 - extracellular solute-binding protein, family 1, at 5,563,442 to 5,564,443
_4695
Psyr_4696: Psyr_4696 - transcriptional regulator, LacI family, at 5,564,427 to 5,565,446
_4696
Psyr_4697: Psyr_4697 - Aminoglycoside phosphotransferase, at 5,565,639 to 5,566,613
_4697
Position (kb) 5564
5565
5566 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5563.443 kb on + strand at 5563.443 kb on + strand at 5563.443 kb on + strand at 5563.443 kb on + strand at 5563.443 kb on + strand at 5563.443 kb on + strand at 5563.443 kb on + strand at 5563.444 kb on - strand at 5563.444 kb on - strand at 5563.444 kb on - strand at 5563.444 kb on - strand at 5563.444 kb on - strand at 5563.444 kb on - strand at 5563.444 kb on - strand at 5563.444 kb on - strand at 5563.461 kb on + strand at 5563.593 kb on + strand, within Psyr_4695 at 5563.593 kb on + strand, within Psyr_4695 at 5563.594 kb on - strand, within Psyr_4695 at 5563.594 kb on - strand, within Psyr_4695 at 5563.696 kb on - strand, within Psyr_4695 at 5563.782 kb on + strand, within Psyr_4695 at 5563.824 kb on + strand, within Psyr_4695 at 5563.825 kb on - strand, within Psyr_4695 at 5563.875 kb on + strand, within Psyr_4695 at 5563.876 kb on - strand, within Psyr_4695 at 5563.876 kb on - strand, within Psyr_4695 at 5563.944 kb on + strand, within Psyr_4695 at 5563.992 kb on + strand, within Psyr_4695 at 5563.992 kb on + strand, within Psyr_4695 at 5563.992 kb on + strand, within Psyr_4695 at 5563.992 kb on + strand, within Psyr_4695 at 5563.993 kb on - strand, within Psyr_4695 at 5563.993 kb on - strand, within Psyr_4695 at 5564.151 kb on + strand, within Psyr_4695 at 5564.151 kb on + strand, within Psyr_4695 at 5564.151 kb on + strand, within Psyr_4695 at 5564.151 kb on + strand, within Psyr_4695 at 5564.152 kb on - strand, within Psyr_4695 at 5564.152 kb on - strand, within Psyr_4695 at 5564.152 kb on - strand, within Psyr_4695 at 5564.152 kb on - strand, within Psyr_4695 at 5564.152 kb on - strand, within Psyr_4695 at 5564.152 kb on - strand, within Psyr_4695 at 5564.203 kb on - strand, within Psyr_4695 at 5564.205 kb on + strand, within Psyr_4695 at 5564.205 kb on + strand, within Psyr_4695 at 5564.205 kb on + strand, within Psyr_4695 at 5564.205 kb on + strand, within Psyr_4695 at 5564.206 kb on - strand, within Psyr_4695 at 5564.206 kb on - strand, within Psyr_4695 at 5564.206 kb on - strand, within Psyr_4695 at 5564.358 kb on + strand at 5564.359 kb on - strand at 5564.429 kb on - strand at 5564.751 kb on + strand, within Psyr_4696 at 5564.751 kb on + strand, within Psyr_4696 at 5564.751 kb on + strand, within Psyr_4696 at 5564.786 kb on + strand, within Psyr_4696 at 5564.786 kb on + strand, within Psyr_4696 at 5564.787 kb on - strand, within Psyr_4696 at 5564.787 kb on - strand, within Psyr_4696 at 5564.787 kb on - strand, within Psyr_4696 at 5564.858 kb on - strand, within Psyr_4696 at 5565.151 kb on + strand, within Psyr_4696 at 5565.152 kb on - strand, within Psyr_4696 at 5565.152 kb on - strand, within Psyr_4696 at 5565.176 kb on + strand, within Psyr_4696 at 5565.178 kb on + strand, within Psyr_4696 at 5565.366 kb on + strand at 5565.366 kb on + strand at 5565.366 kb on + strand at 5565.366 kb on + strand at 5565.367 kb on - strand at 5565.367 kb on - strand at 5565.485 kb on + strand at 5565.486 kb on - strand at 5565.555 kb on + strand at 5565.593 kb on + strand at 5565.593 kb on + strand at 5565.634 kb on + strand at 5565.635 kb on - strand at 5565.635 kb on - strand at 5565.662 kb on + strand at 5565.662 kb on + strand at 5565.662 kb on + strand at 5565.662 kb on + strand at 5565.662 kb on + strand at 5565.662 kb on + strand at 5565.663 kb on - strand at 5565.663 kb on - strand at 5565.663 kb on - strand at 5565.663 kb on - strand at 5565.753 kb on + strand, within Psyr_4697 at 5565.754 kb on - strand, within Psyr_4697 at 5566.013 kb on - strand, within Psyr_4697 at 5566.323 kb on - strand, within Psyr_4697 at 5566.390 kb on - strand, within Psyr_4697
Per-strain Table
Position Strand Gene LocusTag Fraction MBOA 1.2 mM remove 5,563,443 + +0.1 5,563,443 + +0.1 5,563,443 + +1.8 5,563,443 + +0.3 5,563,443 + +1.0 5,563,443 + -2.3 5,563,443 + -1.3 5,563,444 - +0.2 5,563,444 - +0.2 5,563,444 - +0.2 5,563,444 - -0.5 5,563,444 - +0.1 5,563,444 - -2.7 5,563,444 - +0.4 5,563,444 - -0.3 5,563,461 + +1.1 5,563,593 + Psyr_4695 0.15 +0.3 5,563,593 + Psyr_4695 0.15 -0.7 5,563,594 - Psyr_4695 0.15 +0.2 5,563,594 - Psyr_4695 0.15 -0.2 5,563,696 - Psyr_4695 0.25 +0.1 5,563,782 + Psyr_4695 0.34 -1.0 5,563,824 + Psyr_4695 0.38 -0.0 5,563,825 - Psyr_4695 0.38 -0.2 5,563,875 + Psyr_4695 0.43 -0.2 5,563,876 - Psyr_4695 0.43 +0.1 5,563,876 - Psyr_4695 0.43 +1.0 5,563,944 + Psyr_4695 0.50 -0.1 5,563,992 + Psyr_4695 0.55 +0.5 5,563,992 + Psyr_4695 0.55 -2.0 5,563,992 + Psyr_4695 0.55 -0.2 5,563,992 + Psyr_4695 0.55 +2.3 5,563,993 - Psyr_4695 0.55 +1.5 5,563,993 - Psyr_4695 0.55 +0.7 5,564,151 + Psyr_4695 0.71 -1.0 5,564,151 + Psyr_4695 0.71 +1.4 5,564,151 + Psyr_4695 0.71 -0.3 5,564,151 + Psyr_4695 0.71 -0.3 5,564,152 - Psyr_4695 0.71 -0.7 5,564,152 - Psyr_4695 0.71 +0.6 5,564,152 - Psyr_4695 0.71 -0.2 5,564,152 - Psyr_4695 0.71 -0.4 5,564,152 - Psyr_4695 0.71 -1.0 5,564,152 - Psyr_4695 0.71 +0.5 5,564,203 - Psyr_4695 0.76 -0.6 5,564,205 + Psyr_4695 0.76 +1.5 5,564,205 + Psyr_4695 0.76 +0.3 5,564,205 + Psyr_4695 0.76 -0.9 5,564,205 + Psyr_4695 0.76 +0.1 5,564,206 - Psyr_4695 0.76 -0.7 5,564,206 - Psyr_4695 0.76 +0.8 5,564,206 - Psyr_4695 0.76 -0.4 5,564,358 + +0.4 5,564,359 - -0.4 5,564,429 - +1.0 5,564,751 + Psyr_4696 0.32 -0.3 5,564,751 + Psyr_4696 0.32 -0.5 5,564,751 + Psyr_4696 0.32 -0.7 5,564,786 + Psyr_4696 0.35 +0.5 5,564,786 + Psyr_4696 0.35 -1.4 5,564,787 - Psyr_4696 0.35 -0.8 5,564,787 - Psyr_4696 0.35 +0.2 5,564,787 - Psyr_4696 0.35 +0.6 5,564,858 - Psyr_4696 0.42 -0.6 5,565,151 + Psyr_4696 0.71 -0.5 5,565,152 - Psyr_4696 0.71 -1.3 5,565,152 - Psyr_4696 0.71 -1.5 5,565,176 + Psyr_4696 0.73 -0.2 5,565,178 + Psyr_4696 0.74 -0.5 5,565,366 + -0.2 5,565,366 + -0.3 5,565,366 + +0.3 5,565,366 + +0.5 5,565,367 - +0.1 5,565,367 - -0.1 5,565,485 + -0.2 5,565,486 - -0.1 5,565,555 + -0.4 5,565,593 + -0.9 5,565,593 + -0.9 5,565,634 + +2.9 5,565,635 - +0.2 5,565,635 - +0.3 5,565,662 + +0.1 5,565,662 + -0.2 5,565,662 + -1.0 5,565,662 + +2.9 5,565,662 + +1.3 5,565,662 + -0.9 5,565,663 - +0.3 5,565,663 - +0.9 5,565,663 - +0.0 5,565,663 - +1.3 5,565,753 + Psyr_4697 0.12 +0.8 5,565,754 - Psyr_4697 0.12 -0.2 5,566,013 - Psyr_4697 0.38 +0.9 5,566,323 - Psyr_4697 0.70 -0.3 5,566,390 - Psyr_4697 0.77 -1.0
Or see this region's nucleotide sequence