Experiment: MBOA 1.2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4231 and Psyr_4232 are separated by 192 nucleotides Psyr_4232 and Psyr_4233 are separated by 209 nucleotides
Psyr_4231: Psyr_4231 - ATP-binding region, ATPase-like:Histidine kinase A, N-terminal, at 5,038,879 to 5,040,138
_4231
Psyr_4232: Psyr_4232 - Protein of unknown function DUF541, at 5,040,331 to 5,041,044
_4232
Psyr_4233: Psyr_4233 - PhcA, at 5,041,254 to 5,042,810
_4233
Position (kb)
5040
5041
5042 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5039.334 kb on + strand, within Psyr_4231 at 5039.334 kb on + strand, within Psyr_4231 at 5039.335 kb on - strand, within Psyr_4231 at 5039.335 kb on - strand, within Psyr_4231 at 5039.669 kb on + strand, within Psyr_4231 at 5039.738 kb on + strand, within Psyr_4231 at 5039.738 kb on + strand, within Psyr_4231 at 5039.738 kb on + strand, within Psyr_4231 at 5039.738 kb on + strand, within Psyr_4231 at 5039.738 kb on + strand, within Psyr_4231 at 5039.738 kb on + strand, within Psyr_4231 at 5039.738 kb on + strand, within Psyr_4231 at 5039.738 kb on + strand, within Psyr_4231 at 5039.739 kb on - strand, within Psyr_4231 at 5039.739 kb on - strand, within Psyr_4231 at 5039.739 kb on - strand, within Psyr_4231 at 5039.739 kb on - strand, within Psyr_4231 at 5039.739 kb on - strand, within Psyr_4231 at 5039.739 kb on - strand at 5039.739 kb on - strand, within Psyr_4231 at 5039.739 kb on - strand, within Psyr_4231 at 5039.739 kb on - strand, within Psyr_4231 at 5039.739 kb on - strand, within Psyr_4231 at 5039.739 kb on - strand, within Psyr_4231 at 5039.739 kb on - strand, within Psyr_4231 at 5039.739 kb on - strand, within Psyr_4231 at 5039.739 kb on - strand, within Psyr_4231 at 5039.739 kb on - strand, within Psyr_4231 at 5039.774 kb on + strand at 5039.819 kb on + strand, within Psyr_4231 at 5039.819 kb on + strand, within Psyr_4231 at 5039.819 kb on + strand, within Psyr_4231 at 5039.820 kb on - strand, within Psyr_4231 at 5039.823 kb on - strand, within Psyr_4231 at 5039.858 kb on + strand, within Psyr_4231 at 5039.858 kb on + strand, within Psyr_4231 at 5039.858 kb on + strand, within Psyr_4231 at 5039.859 kb on - strand, within Psyr_4231 at 5039.859 kb on - strand, within Psyr_4231 at 5039.859 kb on - strand, within Psyr_4231 at 5040.178 kb on + strand at 5040.178 kb on + strand at 5040.178 kb on + strand at 5040.178 kb on + strand at 5040.178 kb on + strand at 5040.178 kb on + strand at 5040.178 kb on + strand at 5040.179 kb on - strand at 5040.179 kb on - strand at 5040.179 kb on - strand at 5040.179 kb on - strand at 5040.268 kb on - strand at 5040.484 kb on + strand, within Psyr_4232 at 5040.485 kb on - strand, within Psyr_4232 at 5040.485 kb on - strand, within Psyr_4232 at 5040.619 kb on + strand, within Psyr_4232 at 5040.619 kb on + strand, within Psyr_4232 at 5040.859 kb on - strand, within Psyr_4232 at 5040.865 kb on + strand, within Psyr_4232 at 5040.866 kb on - strand, within Psyr_4232 at 5040.866 kb on - strand, within Psyr_4232 at 5040.891 kb on + strand, within Psyr_4232 at 5040.891 kb on + strand, within Psyr_4232 at 5040.892 kb on - strand, within Psyr_4232 at 5040.913 kb on + strand, within Psyr_4232 at 5040.913 kb on + strand, within Psyr_4232 at 5040.913 kb on + strand, within Psyr_4232 at 5041.022 kb on + strand at 5041.022 kb on + strand at 5041.023 kb on - strand at 5041.023 kb on - strand at 5041.057 kb on + strand at 5041.057 kb on + strand at 5041.061 kb on - strand at 5041.125 kb on + strand at 5041.125 kb on + strand at 5041.125 kb on + strand at 5041.125 kb on + strand at 5041.125 kb on + strand at 5041.125 kb on + strand at 5041.125 kb on + strand at 5041.126 kb on - strand at 5041.126 kb on - strand at 5041.126 kb on - strand at 5041.126 kb on - strand at 5041.313 kb on + strand at 5041.313 kb on + strand at 5041.314 kb on - strand at 5041.379 kb on + strand at 5041.380 kb on - strand at 5041.380 kb on - strand at 5041.380 kb on - strand at 5041.380 kb on - strand at 5041.380 kb on - strand at 5041.446 kb on + strand, within Psyr_4233 at 5041.446 kb on + strand, within Psyr_4233 at 5041.470 kb on + strand, within Psyr_4233 at 5041.650 kb on + strand, within Psyr_4233 at 5041.795 kb on - strand, within Psyr_4233 at 5042.024 kb on + strand, within Psyr_4233 at 5042.025 kb on - strand, within Psyr_4233
Per-strain Table
Position Strand Gene LocusTag Fraction MBOA 1.2 mM remove 5,039,334 + Psyr_4231 0.36 +0.9 5,039,334 + Psyr_4231 0.36 +2.2 5,039,335 - Psyr_4231 0.36 -0.1 5,039,335 - Psyr_4231 0.36 +0.2 5,039,669 + Psyr_4231 0.63 +0.1 5,039,738 + Psyr_4231 0.68 -1.2 5,039,738 + Psyr_4231 0.68 +0.2 5,039,738 + Psyr_4231 0.68 -0.4 5,039,738 + Psyr_4231 0.68 +0.5 5,039,738 + Psyr_4231 0.68 -0.6 5,039,738 + Psyr_4231 0.68 -0.2 5,039,738 + Psyr_4231 0.68 +2.1 5,039,738 + Psyr_4231 0.68 -0.9 5,039,739 - Psyr_4231 0.68 -0.0 5,039,739 - Psyr_4231 0.68 -0.7 5,039,739 - Psyr_4231 0.68 -0.3 5,039,739 - Psyr_4231 0.68 +0.9 5,039,739 - Psyr_4231 0.68 +0.3 5,039,739 - -0.3 5,039,739 - Psyr_4231 0.68 -0.6 5,039,739 - Psyr_4231 0.68 -1.3 5,039,739 - Psyr_4231 0.68 -0.4 5,039,739 - Psyr_4231 0.68 +0.2 5,039,739 - Psyr_4231 0.68 +1.0 5,039,739 - Psyr_4231 0.68 -1.5 5,039,739 - Psyr_4231 0.68 +0.2 5,039,739 - Psyr_4231 0.68 -0.3 5,039,739 - Psyr_4231 0.68 -0.5 5,039,774 + -1.7 5,039,819 + Psyr_4231 0.75 -0.5 5,039,819 + Psyr_4231 0.75 -0.2 5,039,819 + Psyr_4231 0.75 -0.5 5,039,820 - Psyr_4231 0.75 -0.4 5,039,823 - Psyr_4231 0.75 -0.2 5,039,858 + Psyr_4231 0.78 -0.2 5,039,858 + Psyr_4231 0.78 -0.4 5,039,858 + Psyr_4231 0.78 -0.6 5,039,859 - Psyr_4231 0.78 -0.8 5,039,859 - Psyr_4231 0.78 -0.7 5,039,859 - Psyr_4231 0.78 -0.5 5,040,178 + -1.0 5,040,178 + -0.9 5,040,178 + +0.1 5,040,178 + -1.8 5,040,178 + -0.1 5,040,178 + +0.7 5,040,178 + -1.3 5,040,179 - +0.4 5,040,179 - +0.2 5,040,179 - -0.4 5,040,179 - +0.4 5,040,268 - +0.4 5,040,484 + Psyr_4232 0.21 -2.4 5,040,485 - Psyr_4232 0.22 -2.0 5,040,485 - Psyr_4232 0.22 -0.5 5,040,619 + Psyr_4232 0.40 -1.5 5,040,619 + Psyr_4232 0.40 +0.6 5,040,859 - Psyr_4232 0.74 +0.5 5,040,865 + Psyr_4232 0.75 -0.7 5,040,866 - Psyr_4232 0.75 -0.4 5,040,866 - Psyr_4232 0.75 -1.0 5,040,891 + Psyr_4232 0.78 +0.2 5,040,891 + Psyr_4232 0.78 -1.8 5,040,892 - Psyr_4232 0.79 +0.2 5,040,913 + Psyr_4232 0.82 -0.4 5,040,913 + Psyr_4232 0.82 +0.1 5,040,913 + Psyr_4232 0.82 +1.4 5,041,022 + -0.3 5,041,022 + +0.6 5,041,023 - +0.6 5,041,023 - +1.3 5,041,057 + +0.2 5,041,057 + -0.4 5,041,061 - +0.3 5,041,125 + -0.6 5,041,125 + -0.7 5,041,125 + -1.3 5,041,125 + +0.8 5,041,125 + -0.7 5,041,125 + +0.5 5,041,125 + -0.9 5,041,126 - +0.8 5,041,126 - -0.0 5,041,126 - -0.4 5,041,126 - +0.2 5,041,313 + +0.2 5,041,313 + -0.3 5,041,314 - +1.9 5,041,379 + -0.4 5,041,380 - -0.2 5,041,380 - +0.0 5,041,380 - +0.4 5,041,380 - +1.3 5,041,380 - +1.1 5,041,446 + Psyr_4233 0.12 +0.5 5,041,446 + Psyr_4233 0.12 -0.1 5,041,470 + Psyr_4233 0.14 +0.2 5,041,650 + Psyr_4233 0.25 -1.1 5,041,795 - Psyr_4233 0.35 -0.7 5,042,024 + Psyr_4233 0.49 -0.6 5,042,025 - Psyr_4233 0.50 -1.4
Or see this region's nucleotide sequence