Experiment: MBOA 0.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_0519 and Psyr_0520 are separated by 129 nucleotides Psyr_0520 and Psyr_0521 are separated by 2 nucleotides
Psyr_0519: Psyr_0519 - Glutamate-ammonia-ligase adenylyltransferase, at 579,311 to 582,268
_0519
Psyr_0520: Psyr_0520 - Glycosyl transferase, family 9, at 582,398 to 583,432
_0520
Psyr_0521: Psyr_0521 - Glycosyl transferase, family 9, at 583,435 to 584,499
_0521
Position (kb) 582
583
584 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 581.456 kb on + strand, within Psyr_0519 at 581.639 kb on + strand, within Psyr_0519 at 581.639 kb on + strand, within Psyr_0519 at 581.640 kb on - strand, within Psyr_0519 at 582.011 kb on + strand at 582.056 kb on + strand at 582.056 kb on + strand at 582.140 kb on + strand at 582.140 kb on + strand at 582.140 kb on + strand at 582.140 kb on + strand at 582.140 kb on + strand at 582.140 kb on + strand at 582.140 kb on + strand at 582.140 kb on + strand at 582.140 kb on + strand at 582.142 kb on + strand at 582.142 kb on + strand at 582.304 kb on + strand at 582.304 kb on + strand at 582.304 kb on + strand at 582.304 kb on + strand at 582.304 kb on + strand at 582.304 kb on + strand at 582.304 kb on + strand at 582.304 kb on + strand at 582.304 kb on + strand at 582.306 kb on + strand at 582.312 kb on + strand at 582.312 kb on + strand at 582.312 kb on + strand at 582.312 kb on + strand at 582.312 kb on + strand at 582.312 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MBOA 0.5 mM remove 581,456 + Psyr_0519 0.73 -0.9 581,639 + Psyr_0519 0.79 -2.6 581,639 + Psyr_0519 0.79 -0.8 581,640 - Psyr_0519 0.79 +0.5 582,011 + -1.6 582,056 + -0.5 582,056 + -0.1 582,140 + -0.9 582,140 + -0.9 582,140 + +1.9 582,140 + -0.8 582,140 + -1.8 582,140 + -0.6 582,140 + -0.8 582,140 + -0.1 582,140 + +0.0 582,142 + +2.4 582,142 + -1.1 582,304 + -0.7 582,304 + -2.5 582,304 + -2.0 582,304 + +2.8 582,304 + +0.2 582,304 + -1.6 582,304 + -1.6 582,304 + +0.7 582,304 + -1.1 582,306 + +0.4 582,312 + +0.7 582,312 + +0.2 582,312 + +2.3 582,312 + -0.6 582,312 + +0.2 582,312 + +0.2
Or see this region's nucleotide sequence